RNA–Protein interactions for RNA: ENST00000534754.5

SORL1-213, Transcript of sortilin related receptor 1, humanhuman

TSL 3

Gene SORL1, Length 2,222 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-213ENST00000534754 C4orf3Q8WVX3 66 aa6.31□□□□□ -1.4
SORL1-213ENST00000534754 RPL36ALQ969Q0 106 aaKnown RBP6.31□□□□□ -1.4
SORL1-213ENST00000534754 CDC42SE2Q9NRR3 84 aa6.31□□□□□ -1.4
SORL1-213ENST00000534754 RPS28P62857 69 aaKnown RBP6.3□□□□□ -1.4
SORL1-213ENST00000534754 Q6JHZ5 121 aa6.3□□□□□ -1.4
SORL1-213ENST00000534754 LINC00337Q8N6G1 96 aa6.3□□□□□ -1.4
SORL1-213ENST00000534754 SND1-IT1Q9HBX3 110 aa6.3□□□□□ -1.4
SORL1-213ENST00000534754 TRBV10-1A0A0K0K1A3 114 aa6.3□□□□□ -1.4
SORL1-213ENST00000534754 H0YGX0 51 aa6.3□□□□□ -1.4
SORL1-213ENST00000534754 MIR7-3HGQ8N6C7 128 aa6.3□□□□□ -1.4
SORL1-213ENST00000534754 MAP6D1Q9H9H5 199 aa6.3□□□□□ -1.4
SORL1-213ENST00000534754 C14orf132Q9NPU4 83 aa6.3□□□□□ -1.4
SORL1-213ENST00000534754 MGAM2Q2M2H8 2515 aa6.3□□□□□ -1.4
SORL1-213ENST00000534754 A0A087WYN8 130 aa6.29□□□□□ -1.4
SORL1-213ENST00000534754 hADV29S1A0JD25 119 aa6.29□□□□□ -1.4
SORL1-213ENST00000534754 SLURP1P55000 103 aa6.29□□□□□ -1.4
SORL1-213ENST00000534754 NTM-AS1Q6ZSK4 140 aa6.29□□□□□ -1.4
SORL1-213ENST00000534754 FAM19A5Q7Z5A7 132 aaPredicted RBP6.29□□□□□ -1.4
SORL1-213ENST00000534754 SMIM11BQ8TCY0 68 aa6.29□□□□□ -1.4
SORL1-213ENST00000534754 OBSCN-AS1Q96MR7 158 aa6.29□□□□□ -1.4
SORL1-213ENST00000534754 CMYA5Q8N3K9 4069 aa6.29□□□□□ -1.4
SORL1-213ENST00000534754 NBEAL1Q6ZS30 2694 aa6.29□□□□□ -1.4
SORL1-213ENST00000534754 NOTCH1P46531 2555 aa6.29□□□□□ -1.4
SORL1-213ENST00000534754 IGKV2-28A0A075B6P5 120 aa6.29□□□□□ -1.4
SORL1-213ENST00000534754 K7EQD1 137 aa6.29□□□□□ -1.4
SORL1-213ENST00000534754 IGKV2D-28P01615 120 aa6.29□□□□□ -1.4
SORL1-213ENST00000534754 C5orf47Q569G3 176 aa6.29□□□□□ -1.4
SORL1-213ENST00000534754 COX7B2Q8TF08 81 aa6.29□□□□□ -1.4
SORL1-213ENST00000534754 TRGV1A0A0A0MS02 117 aa6.28□□□□□ -1.4
SORL1-213ENST00000534754 IGKV3D-7A0A0C4DH55 119 aa6.28□□□□□ -1.4
SORL1-213ENST00000534754 CCL24O00175 119 aa6.28□□□□□ -1.4
SORL1-213ENST00000534754 UBE2L6O14933 153 aa6.28□□□□□ -1.4
SORL1-213ENST00000534754 SERP2Q8N6R1 65 aa6.28□□□□□ -1.4
SORL1-213ENST00000534754 TMEM258P61165 79 aa6.27□□□□□ -1.4
SORL1-213ENST00000534754 TMEM243Q9BU79 118 aa6.27□□□□□ -1.4
SORL1-213ENST00000534754 LINC00846Q9NV44 126 aa6.27□□□□□ -1.4
SORL1-213ENST00000534754 SMIM9A6NGZ8 99 aa6.27□□□□□ -1.41
SORL1-213ENST00000534754 LINC00158P58513 81 aa6.27□□□□□ -1.41
SORL1-213ENST00000534754 C9orf129Q5T035 196 aaKnown RBP6.27□□□□□ -1.41
SORL1-213ENST00000534754 OR13C6PQ8NH95 151 aa6.27□□□□□ -1.41
SORL1-213ENST00000534754 DYNLRB2Q8TF09 96 aa6.27□□□□□ -1.41
SORL1-213ENST00000534754 XCL2Q9UBD3 114 aa6.27□□□□□ -1.41
SORL1-213ENST00000534754 LINC00482Q8N8I6 264 aa6.26□□□□□ -1.41
SORL1-213ENST00000534754 IL17DQ8TAD2 202 aa6.26□□□□□ -1.41
SORL1-213ENST00000534754 TOMM7Q9P0U1 55 aa6.26□□□□□ -1.41
SORL1-213ENST00000534754 LECT2O14960 151 aa6.26□□□□□ -1.41
SORL1-213ENST00000534754 CCL18P55774 89 aa6.26□□□□□ -1.41
SORL1-213ENST00000534754 USP17L23D6RBM5 183 aa6.25□□□□□ -1.41
SORL1-213ENST00000534754 CYSTM1Q9H1C7 97 aa6.25□□□□□ -1.41
SORL1-213ENST00000534754 IBA57-AS1B1ANH7 110 aa6.25□□□□□ -1.41
SORL1-213ENST00000534754 NCR3O14931 201 aa6.25□□□□□ -1.41
SORL1-213ENST00000534754 LINC01561Q8N1V8 128 aa6.25□□□□□ -1.41
SORL1-213ENST00000534754 UPK3BQ9BT76 320 aa6.25□□□□□ -1.41
SORL1-213ENST00000534754 A0A087WVE0 104 aa6.24□□□□□ -1.41
SORL1-213ENST00000534754 Q6ZTI0 123 aa6.24□□□□□ -1.41
SORL1-213ENST00000534754 C1orf158Q8N1D5 194 aa6.24□□□□□ -1.41
SORL1-213ENST00000534754 DEFB114Q30KQ6 69 aa6.23□□□□□ -1.41
SORL1-213ENST00000534754 DPH3Q96FX2 82 aa6.23□□□□□ -1.41
SORL1-213ENST00000534754 ORMDL1Q9P0S3 153 aa6.23□□□□□ -1.41
SORL1-213ENST00000534754 PAX4O43316 350 aa6.23□□□□□ -1.41
SORL1-213ENST00000534754 S100A7L2Q5SY68 101 aa6.23□□□□□ -1.41
SORL1-213ENST00000534754 STHQ8IWL8 128 aa6.23□□□□□ -1.41
SORL1-213ENST00000534754 CCKP06307 115 aa6.22□□□□□ -1.41
SORL1-213ENST00000534754 WFDC9Q8NEX5 89 aa6.22□□□□□ -1.41
SORL1-213ENST00000534754 IGKV3OR2-268A0A0C4DH90 116 aa6.22□□□□□ -1.41
SORL1-213ENST00000534754 SLPIP03973 132 aa6.22□□□□□ -1.41
SORL1-213ENST00000534754 PFN2P35080 140 aa6.22□□□□□ -1.41
SORL1-213ENST00000534754 IGHV3OR16-9A0A0B4J2B5 98 aa6.21□□□□□ -1.42
SORL1-213ENST00000534754 TRBV6-4A0A1B0GX49 114 aa6.21□□□□□ -1.42
SORL1-213ENST00000534754 ODF3L2Q3SX64 289 aa6.21□□□□□ -1.42
SORL1-213ENST00000534754 ATP5EP2Q5VTU8 51 aa6.21□□□□□ -1.42
SORL1-213ENST00000534754 KIR2DL5BQ8NHK3 375 aa6.21□□□□□ -1.42
SORL1-213ENST00000534754 A0A087WZ39 114 aa6.21□□□□□ -1.42
SORL1-213ENST00000534754 NOP10Q9NPE3 64 aaKnown RBP6.21□□□□□ -1.42
SORL1-213ENST00000534754 JMJD7-PLA2G4BH0Y9G9 81 aa6.2□□□□□ -1.42
SORL1-213ENST00000534754 SS18Q15532 418 aa6.2□□□□□ -1.42
SORL1-213ENST00000534754 OXLD1Q5BKU9 147 aa6.2□□□□□ -1.42
SORL1-213ENST00000534754 LINC00167Q96N53 147 aa6.19□□□□□ -1.42
SORL1-213ENST00000534754 DSCR8Q96T75 97 aa6.19□□□□□ -1.42
SORL1-213ENST00000534754 IGLV4-60A0A075B6I1 120 aa6.19□□□□□ -1.42
SORL1-213ENST00000534754 TRGV2A0A075B6R0 118 aa6.19□□□□□ -1.42
SORL1-213ENST00000534754 TRAV25A0A0B4J276 109 aa6.19□□□□□ -1.42
SORL1-213ENST00000534754 LOC100131303A0A0U1RQF7 123 aa6.18□□□□□ -1.42
SORL1-213ENST00000534754 TRBV6-8A0A0A6YYG3 113 aa6.18□□□□□ -1.42
SORL1-213ENST00000534754 NDUFC2-KCTD14E9PQ53 114 aa6.18□□□□□ -1.42
SORL1-213ENST00000534754 WIPF1O43516 503 aa6.18□□□□□ -1.42
SORL1-213ENST00000534754 NDUFC2O95298 119 aa6.18□□□□□ -1.42
SORL1-213ENST00000534754 GHRHP01286 108 aa6.18□□□□□ -1.42
SORL1-213ENST00000534754 C6orf226Q5I0X4 101 aa6.18□□□□□ -1.42
SORL1-213ENST00000534754 DNAH3Q8TD57 4116 aa6.17□□□□□ -1.42
SORL1-213ENST00000534754 TMEM256-PLSCR3K7ERE1 68 aa6.17□□□□□ -1.42
SORL1-213ENST00000534754 OXTP01178 125 aa6.17□□□□□ -1.42
SORL1-213ENST00000534754 IGLV1-51P01701 117 aa6.17□□□□□ -1.42
SORL1-213ENST00000534754 C16orf74Q96GX8 76 aa6.17□□□□□ -1.42
SORL1-213ENST00000534754 TRGV4A0A0C4DH28 118 aa6.17□□□□□ -1.42
SORL1-213ENST00000534754 Q8N814 137 aa6.17□□□□□ -1.42
SORL1-213ENST00000534754 C11orf68Q9H3H3 251 aaKnown RBP6.17□□□□□ -1.42
SORL1-213ENST00000534754 TRAV23DV6A0A075B6W5 121 aa6.16□□□□□ -1.42
SORL1-213ENST00000534754 TRBV10-3A0A0K0K1G6 114 aa6.16□□□□□ -1.42
SORL1-213ENST00000534754 KRTAP10-11P60412 298 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms