RNA–Protein interactions for RNA: ENST00000534375.1

PICALM-222, Transcript of phosphatidylinositol binding clathrin assembly protein, human

TSL 2

Gene PICALM, Length 390 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PICALM-222	ENST00000534375	TLN1	Q9Y490	2541 aa	Known RBP	1	□□□□□ -2.25
PICALM-222	ENST00000534375	CREBBP	Q92793	2442 aa		1	□□□□□ -2.25
PICALM-222	ENST00000534375	VPS13A	Q96RL7	3174 aa		1	□□□□□ -2.25
PICALM-222	ENST00000534375	DIP2B	Q9P265	1576 aa		1	□□□□□ -2.25
PICALM-222	ENST00000534375	CLASP1	Q7Z460	1538 aa		1	□□□□□ -2.25
PICALM-222	ENST00000534375	TRBV7-7	A0A0K0K1E9	115 aa		1	□□□□□ -2.25
PICALM-222	ENST00000534375	FAM223B	A6NKX1	122 aa		1	□□□□□ -2.25
PICALM-222	ENST00000534375	NMB	P08949	121 aa		1	□□□□□ -2.25
PICALM-222	ENST00000534375	SPRR4	Q96PI1	79 aa		1	□□□□□ -2.25
PICALM-222	ENST00000534375	NCOR2	Q9Y618	2525 aa		1	□□□□□ -2.25
PICALM-222	ENST00000534375	KIAA1109	Q2LD37	5005 aa		1	□□□□□ -2.25
PICALM-222	ENST00000534375	RGPD4	Q7Z3J3	1758 aa		1	□□□□□ -2.25
PICALM-222	ENST00000534375	MYH4	Q9Y623	1939 aa		0.99	□□□□□ -2.25
PICALM-222	ENST00000534375	FAM186A	A6NE01	2351 aa		0.99	□□□□□ -2.25
PICALM-222	ENST00000534375	UTP20	O75691	2785 aa	Known RBP	0.99	□□□□□ -2.25
PICALM-222	ENST00000534375	PIEZO2	Q9H5I5	2752 aa		0.99	□□□□□ -2.25
PICALM-222	ENST00000534375	IGSF10	Q6WRI0	2623 aa		0.99	□□□□□ -2.25
PICALM-222	ENST00000534375	CEP295	Q9C0D2	2601 aa		0.99	□□□□□ -2.25
PICALM-222	ENST00000534375	LRRC37A2	A6NM11	1700 aa		0.99	□□□□□ -2.25
PICALM-222	ENST00000534375	NDUFC1	O43677	76 aa		0.99	□□□□□ -2.25
PICALM-222	ENST00000534375	ASIP	P42127	132 aa		0.99	□□□□□ -2.25
PICALM-222	ENST00000534375	C9orf62	Q8N4C0	152 aa		0.99	□□□□□ -2.25
PICALM-222	ENST00000534375	TRGV9	Q99603	122 aa		0.99	□□□□□ -2.25
PICALM-222	ENST00000534375		Q9H521	79 aa		0.99	□□□□□ -2.25
PICALM-222	ENST00000534375	FBN2	P35556	2912 aa		0.99	□□□□□ -2.25
PICALM-222	ENST00000534375	RYR3	Q15413	4870 aa		0.99	□□□□□ -2.25
PICALM-222	ENST00000534375	NBEAL2	Q6ZNJ1	2754 aa		0.99	□□□□□ -2.25
PICALM-222	ENST00000534375	TEX15	Q9BXT5	2789 aa		0.99	□□□□□ -2.25
PICALM-222	ENST00000534375	NSD3	Q9BZ95	1437 aa		0.98	□□□□□ -2.25
PICALM-222	ENST00000534375	CELSR1	Q9NYQ6	3014 aa		0.98	□□□□□ -2.25
PICALM-222	ENST00000534375	PLCE1	Q9P212	2302 aa		0.98	□□□□□ -2.25
PICALM-222	ENST00000534375	C20orf78	Q9BR46	151 aa		0.98	□□□□□ -2.25
PICALM-222	ENST00000534375		V9GYS6	101 aa		0.98	□□□□□ -2.25
PICALM-222	ENST00000534375	MTOR	P42345	2549 aa		0.98	□□□□□ -2.25
PICALM-222	ENST00000534375	NBEAL1	Q6ZS30	2694 aa		0.98	□□□□□ -2.25
PICALM-222	ENST00000534375	SPTBN2	O15020	2390 aa		0.98	□□□□□ -2.25
PICALM-222	ENST00000534375	NRXN1	Q9ULB1	1477 aa		0.98	□□□□□ -2.25
PICALM-222	ENST00000534375	WIZ	O95785	1651 aa		0.97	□□□□□ -2.25
PICALM-222	ENST00000534375	UBR5	O95071	2799 aa	Predicted RBP	0.97	□□□□□ -2.25
PICALM-222	ENST00000534375	RIF1	Q5UIP0	2472 aa	Known RBP	0.97	□□□□□ -2.25
PICALM-222	ENST00000534375	MADD	Q8WXG6	1647 aa		0.97	□□□□□ -2.25
PICALM-222	ENST00000534375	APC	P25054	2843 aa		0.97	□□□□□ -2.25
PICALM-222	ENST00000534375	SYS1-DBNDD2	H3BUS1	97 aa		0.97	□□□□□ -2.25
PICALM-222	ENST00000534375	COX17	Q14061	63 aa		0.97	□□□□□ -2.25
PICALM-222	ENST00000534375	PRO1933	Q9H354	126 aa		0.97	□□□□□ -2.25
PICALM-222	ENST00000534375	LRRC7	Q96NW7	1537 aa		0.97	□□□□□ -2.25
PICALM-222	ENST00000534375	RGPD3	A6NKT7	1758 aa	Predicted RBP	0.97	□□□□□ -2.25
PICALM-222	ENST00000534375	FRYL	O94915	3013 aa		0.97	□□□□□ -2.25
PICALM-222	ENST00000534375	FRY	Q5TBA9	3013 aa		0.97	□□□□□ -2.25
PICALM-222	ENST00000534375	NUP188	Q5SRE5	1749 aa		0.97	□□□□□ -2.25
PICALM-222	ENST00000534375	FLNA	P21333	2647 aa	Known RBP	0.97	□□□□□ -2.25
PICALM-222	ENST00000534375	LAMC1	P11047	1609 aa		0.97	□□□□□ -2.25
PICALM-222	ENST00000534375	ALK	Q9UM73	1620 aa		0.97	□□□□□ -2.25
PICALM-222	ENST00000534375	EP300	Q09472	2414 aa	Predicted RBP	0.96	□□□□□ -2.26
PICALM-222	ENST00000534375	TRBV25-1	A0A075B6N4	114 aa		0.96	□□□□□ -2.26
PICALM-222	ENST00000534375	MGP	P08493	103 aa		0.96	□□□□□ -2.26
PICALM-222	ENST00000534375	SSBP3-AS1	Q7Z2R9	100 aa		0.96	□□□□□ -2.26
PICALM-222	ENST00000534375	CIC	Q96RK0	1608 aa	Predicted RBP	0.96	□□□□□ -2.26
PICALM-222	ENST00000534375	BIVM-ERCC5	R4GMW8	1640 aa		0.96	□□□□□ -2.26
PICALM-222	ENST00000534375	USP9Y	O00507	2555 aa	Predicted RBP	0.96	□□□□□ -2.26
PICALM-222	ENST00000534375	BIRC6	Q9NR09	4857 aa		0.95	□□□□□ -2.26
PICALM-222	ENST00000534375	HIVEP3	Q5T1R4	2406 aa		0.95	□□□□□ -2.26
PICALM-222	ENST00000534375	SAA2	P0DJI9	122 aa	Predicted RBP	0.95	□□□□□ -2.26
PICALM-222	ENST00000534375	HAMP	P81172	84 aa		0.95	□□□□□ -2.26
PICALM-222	ENST00000534375		Q6JHZ5	121 aa		0.95	□□□□□ -2.26
PICALM-222	ENST00000534375	UBE2DNL	Q8IWF7	75 aa		0.95	□□□□□ -2.26
PICALM-222	ENST00000534375	KIAA0556	O60303	1618 aa		0.95	□□□□□ -2.26
PICALM-222	ENST00000534375	LRP6	O75581	1613 aa		0.95	□□□□□ -2.26
PICALM-222	ENST00000534375	UBR1	Q8IWV7	1749 aa		0.95	□□□□□ -2.26
PICALM-222	ENST00000534375	CLTC	Q00610	1675 aa	Known RBP	0.94	□□□□□ -2.26
PICALM-222	ENST00000534375	ITPR1	Q14643	2758 aa		0.94	□□□□□ -2.26
PICALM-222	ENST00000534375	TENM4	Q6N022	2769 aa		0.94	□□□□□ -2.26
PICALM-222	ENST00000534375	DOPEY2	Q9Y3R5	2298 aa		0.94	□□□□□ -2.26
PICALM-222	ENST00000534375	LOC400499	M0QZD8	3231 aa		0.94	□□□□□ -2.26
PICALM-222	ENST00000534375	HYDIN	Q4G0P3	5121 aa		0.94	□□□□□ -2.26
PICALM-222	ENST00000534375	PVALEF	A0A1B0GWK0	134 aa		0.94	□□□□□ -2.26
PICALM-222	ENST00000534375	ZNF815P	A8K554	130 aa		0.94	□□□□□ -2.26
PICALM-222	ENST00000534375	PIN1P1	O15428	100 aa		0.94	□□□□□ -2.26
PICALM-222	ENST00000534375	HIGD1B	Q9P298	99 aa		0.94	□□□□□ -2.26
PICALM-222	ENST00000534375	GOLGA4	Q13439	2230 aa	Known RBP	0.94	□□□□□ -2.26
PICALM-222	ENST00000534375	F8	P00451	2351 aa		0.94	□□□□□ -2.26
PICALM-222	ENST00000534375	FRAS1	Q86XX4	4008 aa		0.94	□□□□□ -2.26
PICALM-222	ENST00000534375	SMG1	Q96Q15	3661 aa	Known RBP	0.93	□□□□□ -2.26
PICALM-222	ENST00000534375	CDH23	Q9H251	3354 aa		0.93	□□□□□ -2.26
PICALM-222	ENST00000534375	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	0.93	□□□□□ -2.26	7e-10	■■■■□ 20.5
PICALM-222	ENST00000534375	FREM2	Q5SZK8	3169 aa		0.93	□□□□□ -2.26
PICALM-222	ENST00000534375	WDR87	Q6ZQQ6	2873 aa		0.93	□□□□□ -2.26
PICALM-222	ENST00000534375	SUPT6H	Q7KZ85	1726 aa	Known RBP	0.93	□□□□□ -2.26
PICALM-222	ENST00000534375	NWD1	Q149M9	1564 aa		0.93	□□□□□ -2.26
PICALM-222	ENST00000534375		A0A1B0GWA3	101 aa		0.93	□□□□□ -2.26
PICALM-222	ENST00000534375	FDCSP	Q8NFU4	85 aa		0.93	□□□□□ -2.26
PICALM-222	ENST00000534375	LCN9	Q8WX39	176 aa		0.93	□□□□□ -2.26
PICALM-222	ENST00000534375	PDZD2	O15018	2839 aa		0.93	□□□□□ -2.26
PICALM-222	ENST00000534375	NSD1	Q96L73	2696 aa	Predicted RBP	0.93	□□□□□ -2.26
PICALM-222	ENST00000534375	TLN2	Q9Y4G6	2542 aa		0.93	□□□□□ -2.26
PICALM-222	ENST00000534375	ZNF469	Q96JG9	3925 aa	Predicted RBP	0.93	□□□□□ -2.26
PICALM-222	ENST00000534375	NBEA	Q8NFP9	2946 aa		0.93	□□□□□ -2.26
PICALM-222	ENST00000534375	ANKRD36	A6QL64	1941 aa		0.93	□□□□□ -2.26
PICALM-222	ENST00000534375	DNAH14	Q0VDD8	3507 aa		0.93	□□□□□ -2.26
PICALM-222	ENST00000534375	COL12A1	Q99715	3063 aa		0.92	□□□□□ -2.26

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