RNA–Protein interactions for RNA: ENST00000533242.1

NEDD8-207, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 1 (best)

Gene NEDD8, Length 2,300 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-207ENST00000533242 GAGE12GP0CL81 117 aa5.64□□□□□ -1.51
NEDD8-207ENST00000533242 GAGE12IP0CL82 117 aa5.64□□□□□ -1.51
NEDD8-207ENST00000533242 TMEM101Q96IK0 257 aa5.64□□□□□ -1.51
NEDD8-207ENST00000533242 IGLV5-45A0A087WSX0 123 aa5.63□□□□□ -1.51
NEDD8-207ENST00000533242 TMEM238C9JI98 176 aa5.63□□□□□ -1.51
NEDD8-207ENST00000533242 PRSS2P07478 247 aa5.63□□□□□ -1.51
NEDD8-207ENST00000533242 GEMIN7Q9H840 131 aaKnown RBP5.63□□□□□ -1.51
NEDD8-207ENST00000533242 TRAV4A0A0B4J268 109 aa5.63□□□□□ -1.51
NEDD8-207ENST00000533242 A0A0B4J2C4 111 aa5.63□□□□□ -1.51
NEDD8-207ENST00000533242 CARD19Q96LW7 228 aa5.63□□□□□ -1.51
NEDD8-207ENST00000533242 TRAV13-1A0A0B4J241 112 aa5.62□□□□□ -1.51
NEDD8-207ENST00000533242 LYRM9A8MSI8 78 aa5.62□□□□□ -1.51
NEDD8-207ENST00000533242 EPM2AB3EWF7 344 aa5.62□□□□□ -1.51
NEDD8-207ENST00000533242 CCL18P55774 89 aa5.62□□□□□ -1.51
NEDD8-207ENST00000533242 DAZ2Q13117 558 aaKnown RBP5.62□□□□□ -1.51
NEDD8-207ENST00000533242 DGAT2L7PQ6IED9 249 aa5.62□□□□□ -1.51
NEDD8-207ENST00000533242 ZNF625Q96I27 306 aaPredicted RBP5.62□□□□□ -1.51
NEDD8-207ENST00000533242 GTSF1LQ9H1H1 148 aa5.62□□□□□ -1.51
NEDD8-207ENST00000533242 INAFM2P0DMQ5 153 aa5.62□□□□□ -1.51
NEDD8-207ENST00000533242 RPL36AP83881 106 aaKnown RBP5.62□□□□□ -1.51
NEDD8-207ENST00000533242 RPL36ALQ969Q0 106 aaKnown RBP5.62□□□□□ -1.51
NEDD8-207ENST00000533242 LINC00588Q9Y4M8 146 aa5.62□□□□□ -1.51
NEDD8-207ENST00000533242 TRGV2A0A075B6R0 118 aa5.61□□□□□ -1.51
NEDD8-207ENST00000533242 A0A0U1RRA0 63 aa5.61□□□□□ -1.51
NEDD8-207ENST00000533242 SMIM1B2RUZ4 78 aa5.61□□□□□ -1.51
NEDD8-207ENST00000533242 TRIAP1O43715 76 aa5.61□□□□□ -1.51
NEDD8-207ENST00000533242 SCGB1C2P0DMR2 95 aa5.61□□□□□ -1.51
NEDD8-207ENST00000533242 TIRAPP58753 221 aa5.61□□□□□ -1.51
NEDD8-207ENST00000533242 FOXI1Q12951 378 aa5.61□□□□□ -1.51
NEDD8-207ENST00000533242 MIAQ16674 131 aa5.61□□□□□ -1.51
NEDD8-207ENST00000533242 SPANXDQ9BXN6 97 aa5.61□□□□□ -1.51
NEDD8-207ENST00000533242 CDC42SE2Q9NRR3 84 aa5.61□□□□□ -1.51
NEDD8-207ENST00000533242 SPANXCQ9NY87 97 aa5.61□□□□□ -1.51
NEDD8-207ENST00000533242 IGLV5-39A0A0G2JS06 123 aa5.6□□□□□ -1.51
NEDD8-207ENST00000533242 TRBV10-1A0A0K0K1A3 114 aa5.6□□□□□ -1.51
NEDD8-207ENST00000533242 GAGE12HA6NDE8 117 aa5.6□□□□□ -1.51
NEDD8-207ENST00000533242 TTC32Q5I0X7 151 aa5.6□□□□□ -1.51
NEDD8-207ENST00000533242 ERG28Q9UKR5 140 aa5.6□□□□□ -1.51
NEDD8-207ENST00000533242 LRP1BQ9NZR2 4599 aa5.6□□□□□ -1.51
NEDD8-207ENST00000533242 F5H768 121 aa5.6□□□□□ -1.51
NEDD8-207ENST00000533242 KRTAP10-2P60368 255 aa5.6□□□□□ -1.51
NEDD8-207ENST00000533242 DAZ4Q86SG3 579 aaKnown RBP5.6□□□□□ -1.51
NEDD8-207ENST00000533242 C16orf74Q96GX8 76 aa5.6□□□□□ -1.51
NEDD8-207ENST00000533242 Q9H8V8 135 aa5.6□□□□□ -1.51
NEDD8-207ENST00000533242 DAZ3Q9NR90 486 aaKnown RBP5.6□□□□□ -1.51
NEDD8-207ENST00000533242 TRBV20-1A0A075B6N2 111 aa5.59□□□□□ -1.51
NEDD8-207ENST00000533242 NDUFA1O15239 70 aa5.59□□□□□ -1.51
NEDD8-207ENST00000533242 SOSTDC1Q6X4U4 206 aa5.59□□□□□ -1.51
NEDD8-207ENST00000533242 ANKRD29Q8N6D5 301 aa5.59□□□□□ -1.51
NEDD8-207ENST00000533242 APOBP04114 4563 aaKnown RBP5.59□□□□□ -1.51
NEDD8-207ENST00000533242 IGLV4-60A0A075B6I1 120 aa5.59□□□□□ -1.51
NEDD8-207ENST00000533242 C9JAW5 83 aa5.59□□□□□ -1.51
NEDD8-207ENST00000533242 ATP5G1P05496 136 aa5.59□□□□□ -1.51
NEDD8-207ENST00000533242 FHL2Q14192 279 aa5.59□□□□□ -1.51
NEDD8-207ENST00000533242 Q1RN00 199 aa5.59□□□□□ -1.51
NEDD8-207ENST00000533242 CDIP1Q9H305 208 aa5.59□□□□□ -1.51
NEDD8-207ENST00000533242 CSDC2Q9Y534 153 aaKnown RBP5.59□□□□□ -1.51
NEDD8-207ENST00000533242 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.58□□□□□ -1.52
NEDD8-207ENST00000533242 DEFB130BP0DP73 79 aa5.58□□□□□ -1.52
NEDD8-207ENST00000533242 DEFB130AP0DP74 79 aa5.58□□□□□ -1.52
NEDD8-207ENST00000533242 HERVK_113P63121 156 aa5.58□□□□□ -1.52
NEDD8-207ENST00000533242 SMAGPQ0VAQ4 97 aa5.58□□□□□ -1.52
NEDD8-207ENST00000533242 FAM19A3Q7Z5A8 133 aa5.58□□□□□ -1.52
NEDD8-207ENST00000533242 TEN1Q86WV5 123 aa5.58□□□□□ -1.52
NEDD8-207ENST00000533242 SLC25A20O43772 301 aa5.58□□□□□ -1.52
NEDD8-207ENST00000533242 KRTAP1-5Q9BYS1 174 aa5.58□□□□□ -1.52
NEDD8-207ENST00000533242 TRGV4A0A0C4DH28 118 aa5.57□□□□□ -1.52
NEDD8-207ENST00000533242 IGKV3OR2-268A0A0C4DH90 116 aa5.57□□□□□ -1.52
NEDD8-207ENST00000533242 TRBV6-4A0A1B0GX49 114 aa5.57□□□□□ -1.52
NEDD8-207ENST00000533242 GAGE6Q13070 117 aa5.57□□□□□ -1.52
NEDD8-207ENST00000533242 LYRM7Q5U5X0 104 aa5.57□□□□□ -1.52
NEDD8-207ENST00000533242 ATP6V0E2Q8NHE4 81 aa5.57□□□□□ -1.52
NEDD8-207ENST00000533242 CLEC2BQ92478 149 aa5.57□□□□□ -1.52
NEDD8-207ENST00000533242 UPK3BQ9BT76 320 aa5.57□□□□□ -1.52
NEDD8-207ENST00000533242 TMEM243Q9BU79 118 aa5.57□□□□□ -1.52
NEDD8-207ENST00000533242 ICOSQ9Y6W8 199 aa5.57□□□□□ -1.52
NEDD8-207ENST00000533242 TRBV30A0A0K0K1B3 111 aa5.57□□□□□ -1.52
NEDD8-207ENST00000533242 LINC00308Q8TCZ7 52 aa5.57□□□□□ -1.52
NEDD8-207ENST00000533242 J3QR89 54 aa5.56□□□□□ -1.52
NEDD8-207ENST00000533242 TIMM17BO60830 172 aa5.56□□□□□ -1.52
NEDD8-207ENST00000533242 RPL13AP40429 203 aaKnown RBP5.56□□□□□ -1.52
NEDD8-207ENST00000533242 LINC01620Q4KN68 170 aa5.56□□□□□ -1.52
NEDD8-207ENST00000533242 SIGMAR1Q99720 223 aa5.56□□□□□ -1.52
NEDD8-207ENST00000533242 DNAH5Q8TE73 4624 aa5.56□□□□□ -1.52
NEDD8-207ENST00000533242 Q5VSD8 79 aa5.56□□□□□ -1.52
NEDD8-207ENST00000533242 PPDPFLQ8WWR9 84 aa5.56□□□□□ -1.52
NEDD8-207ENST00000533242 TRBV6-8A0A0A6YYG3 113 aa5.55□□□□□ -1.52
NEDD8-207ENST00000533242 UBE2L6O14933 153 aa5.55□□□□□ -1.52
NEDD8-207ENST00000533242 XGP55808 180 aa5.55□□□□□ -1.52
NEDD8-207ENST00000533242 DMBT1Q9UGM3 2413 aaPredicted RBP5.54□□□□□ -1.52
NEDD8-207ENST00000533242 HERC1Q15751 4861 aa5.54□□□□□ -1.52
NEDD8-207ENST00000533242 A0A096LPF7 62 aa5.54□□□□□ -1.52
NEDD8-207ENST00000533242 TEX49A0A1B0GTD5 131 aa5.54□□□□□ -1.52
NEDD8-207ENST00000533242 MT-ATP8P03928 68 aa5.54□□□□□ -1.52
NEDD8-207ENST00000533242 ATXN8Q156A1 80 aa5.54□□□□□ -1.52
NEDD8-207ENST00000533242 NTN5Q8WTR8 489 aaPredicted RBP5.54□□□□□ -1.52
NEDD8-207ENST00000533242 H3BNG1 76 aa5.53□□□□□ -1.52
NEDD8-207ENST00000533242 H7C423 109 aa5.53□□□□□ -1.52
NEDD8-207ENST00000533242 IFITM1P13164 125 aa5.53□□□□□ -1.52
NEDD8-207ENST00000533242 ESRGQ1W209 222 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms