RNA–Protein interactions for RNA: ENST00000526216.1

COLCA2-202, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best) BASIC

Gene COLCA2, Length 1,332 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-202ENST00000526216 DLEU1O43261 78 aa9.48□□□□□ -0.89
COLCA2-202ENST00000526216 SPAG11BQ08648 103 aa9.48□□□□□ -0.89
COLCA2-202ENST00000526216 SLC25A34Q6PIV7 304 aa9.48□□□□□ -0.89
COLCA2-202ENST00000526216 C2orf91Q6ZV80 131 aa9.48□□□□□ -0.89
COLCA2-202ENST00000526216 TM2D2Q9BX73 214 aa9.48□□□□□ -0.89
COLCA2-202ENST00000526216 NDUFA12Q9UI09 145 aa9.48□□□□□ -0.89
COLCA2-202ENST00000526216 COX11Q9Y6N1 276 aa9.48□□□□□ -0.89
COLCA2-202ENST00000526216 USP17L23D6RBM5 183 aa9.47□□□□□ -0.89
COLCA2-202ENST00000526216 LECT2O14960 151 aa9.47□□□□□ -0.89
COLCA2-202ENST00000526216 NDUFA1O15239 70 aa9.47□□□□□ -0.89
COLCA2-202ENST00000526216 APOMO95445 188 aa9.47□□□□□ -0.89
COLCA2-202ENST00000526216 C2orf82Q6UX34 121 aa9.47□□□□□ -0.89
COLCA2-202ENST00000526216 KMT2CQ8NEZ4 4911 aaKnown RBP9.46□□□□□ -0.89
COLCA2-202ENST00000526216 GVQW2A0A096LPI5 108 aaPredicted RBP9.46□□□□□ -0.9
COLCA2-202ENST00000526216 LCE6AA0A183 80 aa9.46□□□□□ -0.9
COLCA2-202ENST00000526216 MIEN1Q9BRT3 115 aa9.46□□□□□ -0.9
COLCA2-202ENST00000526216 UQCR10Q9UDW1 63 aa9.46□□□□□ -0.9
COLCA2-202ENST00000526216 FAT2Q9NYQ8 4349 aa9.46□□□□□ -0.9
COLCA2-202ENST00000526216 LRCOL1A6NCL2 159 aa9.45□□□□□ -0.9
COLCA2-202ENST00000526216 C10orf25Q5T742 122 aa9.45□□□□□ -0.9
COLCA2-202ENST00000526216 NTN5Q8WTR8 489 aaPredicted RBP9.45□□□□□ -0.9
COLCA2-202ENST00000526216 A0A0J9YXY3 114 aa9.44□□□□□ -0.9
COLCA2-202ENST00000526216 TSTD3H0UI37 97 aa9.44□□□□□ -0.9
COLCA2-202ENST00000526216 PRSS2P07478 247 aa9.44□□□□□ -0.9
COLCA2-202ENST00000526216 C6orf226Q5I0X4 101 aa9.44□□□□□ -0.9
COLCA2-202ENST00000526216 PSCAO43653 123 aa9.43□□□□□ -0.9
COLCA2-202ENST00000526216 SLPIP03973 132 aa9.43□□□□□ -0.9
COLCA2-202ENST00000526216 CFAP161Q6P656 301 aa9.43□□□□□ -0.9
COLCA2-202ENST00000526216 UNQ6190/PRO20217Q6UXQ8 127 aa9.43□□□□□ -0.9
COLCA2-202ENST00000526216 C1orf134Q5TEV5 83 aa9.42□□□□□ -0.9
COLCA2-202ENST00000526216 LITAFQ99732 161 aa9.42□□□□□ -0.9
COLCA2-202ENST00000526216 Q6ZRU5 148 aa9.41□□□□□ -0.9
COLCA2-202ENST00000526216 C2orf48Q96LS8 159 aa9.41□□□□□ -0.9
COLCA2-202ENST00000526216 HECTD4Q9Y4D8 3996 aa9.4□□□□□ -0.9
COLCA2-202ENST00000526216 ZNF561-AS1K7EIQ3 104 aa9.4□□□□□ -0.9
COLCA2-202ENST00000526216 RTL8CO15255 209 aa9.4□□□□□ -0.9
COLCA2-202ENST00000526216 CXCL5P42830 114 aa9.4□□□□□ -0.9
COLCA2-202ENST00000526216 LCE3BQ5TA77 95 aa9.4□□□□□ -0.9
COLCA2-202ENST00000526216 HIGD1BQ9P298 99 aa9.4□□□□□ -0.9
COLCA2-202ENST00000526216 C6orf48Q9UBA6 75 aa9.4□□□□□ -0.9
COLCA2-202ENST00000526216 DDTP30046 118 aa9.39□□□□□ -0.91
COLCA2-202ENST00000526216 HNRNPA3P51991 378 aaKnown RBP9.39□□□□□ -0.91
COLCA2-202ENST00000526216 CKS1BP61024 79 aa9.39□□□□□ -0.91
COLCA2-202ENST00000526216 HERV-K104P63124 156 aa9.39□□□□□ -0.91
COLCA2-202ENST00000526216 C9orf116Q5BN46 136 aaPredicted RBP9.39□□□□□ -0.91
COLCA2-202ENST00000526216 ADAMTSL4-AS1Q5T5F5 129 aa9.39□□□□□ -0.91
COLCA2-202ENST00000526216 DNAH5Q8TE73 4624 aa9.39□□□□□ -0.91
COLCA2-202ENST00000526216 PCP4L1A6NKN8 68 aa9.38□□□□□ -0.91
COLCA2-202ENST00000526216 SMIM13P0DJ93 91 aa9.38□□□□□ -0.91
COLCA2-202ENST00000526216 SCGB1D4Q6XE38 83 aa9.38□□□□□ -0.91
COLCA2-202ENST00000526216 CAMK2N2Q96S95 79 aa9.38□□□□□ -0.91
COLCA2-202ENST00000526216 A0A087WTM6 91 aa9.37□□□□□ -0.91
COLCA2-202ENST00000526216 A0A0U1RRA0 63 aa9.37□□□□□ -0.91
COLCA2-202ENST00000526216 PKD1P98161 4303 aa9.37□□□□□ -0.91
COLCA2-202ENST00000526216 TIMM17BO60830 172 aa9.36□□□□□ -0.91
COLCA2-202ENST00000526216 SYCNQ0VAF6 134 aa9.36□□□□□ -0.91
COLCA2-202ENST00000526216 MEIG1Q5JSS6 88 aa9.36□□□□□ -0.91
COLCA2-202ENST00000526216 SFTA2Q6UW10 78 aa9.36□□□□□ -0.91
COLCA2-202ENST00000526216 ERG28Q9UKR5 140 aa9.36□□□□□ -0.91
COLCA2-202ENST00000526216 RYR3Q15413 4870 aa9.36□□□□□ -0.91
COLCA2-202ENST00000526216 F8WDY8 70 aa9.35□□□□□ -0.91
COLCA2-202ENST00000526216 CTAG1AP78358 180 aa9.35□□□□□ -0.91
COLCA2-202ENST00000526216 TNP2Q05952 138 aa9.35□□□□□ -0.91
COLCA2-202ENST00000526216 DAND5Q8N907 189 aa9.35□□□□□ -0.91
COLCA2-202ENST00000526216 SPANXB1Q9NS25 103 aaPredicted RBP9.35□□□□□ -0.91
COLCA2-202ENST00000526216 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.34□□□□□ -0.91
COLCA2-202ENST00000526216 TRBV30A0A0K0K1B3 111 aa9.34□□□□□ -0.91
COLCA2-202ENST00000526216 EIF4EBP3O60516 100 aaPredicted RBP9.34□□□□□ -0.91
COLCA2-202ENST00000526216 PFN2P35080 140 aa9.34□□□□□ -0.91
COLCA2-202ENST00000526216 Q8N814 137 aa9.34□□□□□ -0.91
COLCA2-202ENST00000526216 CARD19Q96LW7 228 aa9.34□□□□□ -0.91
COLCA2-202ENST00000526216 SPANXDQ9BXN6 97 aa9.34□□□□□ -0.91
COLCA2-202ENST00000526216 SPANXCQ9NY87 97 aa9.34□□□□□ -0.91
COLCA2-202ENST00000526216 LINC00587B1AMM8 73 aa9.33□□□□□ -0.92
COLCA2-202ENST00000526216 CNBPP62633 177 aaKnown RBP9.33□□□□□ -0.92
COLCA2-202ENST00000526216 C14orf177Q52M58 125 aa9.33□□□□□ -0.92
COLCA2-202ENST00000526216 SOSTDC1Q6X4U4 206 aa9.33□□□□□ -0.92
COLCA2-202ENST00000526216 DNAH8Q96JB1 4490 aa9.33□□□□□ -0.92
COLCA2-202ENST00000526216 TMEM238C9JI98 176 aa9.32□□□□□ -0.92
COLCA2-202ENST00000526216 MIR7-3HGQ8N6C7 128 aa9.32□□□□□ -0.92
COLCA2-202ENST00000526216 FUSP35637 526 aaKnown RBP eCLIP9.31□□□□□ -0.92
COLCA2-202ENST00000526216 LINC00158P58513 81 aa9.31□□□□□ -0.92
COLCA2-202ENST00000526216 HSD52Q0P140 79 aa9.31□□□□□ -0.92
COLCA2-202ENST00000526216 RNF151Q2KHN1 245 aa9.31□□□□□ -0.92
COLCA2-202ENST00000526216 NPC2P61916 151 aa9.31□□□□□ -0.92
COLCA2-202ENST00000526216 HIST1H4GQ99525 98 aa9.31□□□□□ -0.92
COLCA2-202ENST00000526216 CIRBPQ14011 172 aaKnown RBP9.3□□□□□ -0.92
COLCA2-202ENST00000526216 COX17Q14061 63 aa9.3□□□□□ -0.92
COLCA2-202ENST00000526216 TAL2Q16559 108 aa9.3□□□□□ -0.92
COLCA2-202ENST00000526216 MUSTN1Q8IVN3 82 aa9.3□□□□□ -0.92
COLCA2-202ENST00000526216 FXYD2P54710 66 aa9.29□□□□□ -0.92
COLCA2-202ENST00000526216 SRSF9Q13242 221 aaKnown RBP eCLIP9.29□□□□□ -0.92
COLCA2-202ENST00000526216 Q6ZRP5 223 aa9.29□□□□□ -0.92
COLCA2-202ENST00000526216 CEND1Q8N111 149 aa9.29□□□□□ -0.92
COLCA2-202ENST00000526216 LINC00308Q8TCZ7 52 aa9.29□□□□□ -0.92
COLCA2-202ENST00000526216 KRTAP9-9Q9BYP9 154 aa9.29□□□□□ -0.92
COLCA2-202ENST00000526216 KRTAP9-4Q9BYQ2 154 aa9.29□□□□□ -0.92
COLCA2-202ENST00000526216 J3QL48 77 aa9.28□□□□□ -0.92
COLCA2-202ENST00000526216 TLX1NBP0CAT3 122 aa9.28□□□□□ -0.92
COLCA2-202ENST00000526216 HINT1P49773 126 aaPredicted RBP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms