RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 MRPS16Q9Y3D3 137 aaKnown RBP2.98□□□□□ -1.93
USP48-211ENST00000526044 DYNC2H1Q8NCM8 4307 aaKnown RBP2.98□□□□□ -1.93
USP48-211ENST00000526044 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.97□□□□□ -1.93
USP48-211ENST00000526044 IGKV2-29A2NJV5 120 aaPredicted RBP2.97□□□□□ -1.93
USP48-211ENST00000526044 LINC01546A6NGU7 62 aa2.97□□□□□ -1.93
USP48-211ENST00000526044 LINC01549A6NIU2 74 aa2.97□□□□□ -1.93
USP48-211ENST00000526044 PFN2P35080 140 aa2.97□□□□□ -1.93
USP48-211ENST00000526044 Q1RN00 199 aa2.97□□□□□ -1.93
USP48-211ENST00000526044 LCE3AQ5TA76 89 aa2.97□□□□□ -1.93
USP48-211ENST00000526044 AMMECR1LQ6DCA0 310 aa2.97□□□□□ -1.93
USP48-211ENST00000526044 C2orf66Q6UXQ4 117 aa2.97□□□□□ -1.93
USP48-211ENST00000526044 TMEM101Q96IK0 257 aa2.97□□□□□ -1.93
USP48-211ENST00000526044 UPK3BQ9BT76 320 aa2.97□□□□□ -1.93
USP48-211ENST00000526044 CYSLTR1Q9Y271 337 aa2.97□□□□□ -1.93
USP48-211ENST00000526044 FBN3Q75N90 2809 aa2.97□□□□□ -1.93
USP48-211ENST00000526044 TRAV8-4A0A0B4J246 113 aa2.96□□□□□ -1.94
USP48-211ENST00000526044 LINC00587B1AMM8 73 aa2.96□□□□□ -1.94
USP48-211ENST00000526044 K7EP13 123 aa2.96□□□□□ -1.94
USP48-211ENST00000526044 NUPR1O60356 82 aa2.96□□□□□ -1.94
USP48-211ENST00000526044 SERF1AO75920 110 aa2.96□□□□□ -1.94
USP48-211ENST00000526044 IGHV3-30P01768 117 aa2.96□□□□□ -1.94
USP48-211ENST00000526044 IGHV3-33P01772 117 aa2.96□□□□□ -1.94
USP48-211ENST00000526044 HBDP02042 147 aa2.96□□□□□ -1.94
USP48-211ENST00000526044 IGHV3-30-3P0DP02 117 aa2.96□□□□□ -1.94
USP48-211ENST00000526044 IGHV3-30-5P0DP03 117 aa2.96□□□□□ -1.94
USP48-211ENST00000526044 FGF6P10767 208 aa2.96□□□□□ -1.94
USP48-211ENST00000526044 ZNF25P17030 456 aaPredicted RBP2.96□□□□□ -1.94
USP48-211ENST00000526044 RPL39P62891 51 aaKnown RBP2.96□□□□□ -1.94
USP48-211ENST00000526044 PMCHL1Q16048 86 aa2.96□□□□□ -1.94
USP48-211ENST00000526044 LINC01556Q5JQF7 62 aa2.96□□□□□ -1.94
USP48-211ENST00000526044 COA6Q5JTJ3 125 aaKnown RBP2.96□□□□□ -1.94
USP48-211ENST00000526044 WFDC10BQ8IUB3 73 aa2.96□□□□□ -1.94
USP48-211ENST00000526044 FAM19A2Q8N3H0 131 aa2.96□□□□□ -1.94
USP48-211ENST00000526044 ZNF664Q8N3J9 261 aa2.96□□□□□ -1.94
USP48-211ENST00000526044 Q8N976 141 aa2.96□□□□□ -1.94
USP48-211ENST00000526044 OR5A1Q8NGJ0 315 aa2.96□□□□□ -1.94
USP48-211ENST00000526044 TOMM6Q96B49 74 aa2.96□□□□□ -1.94
USP48-211ENST00000526044 SCGB3A1Q96QR1 104 aa2.96□□□□□ -1.94
USP48-211ENST00000526044 TIMM21Q9BVV7 248 aa2.96□□□□□ -1.94
USP48-211ENST00000526044 SS18L2Q9UHA2 77 aa2.96□□□□□ -1.94
USP48-211ENST00000526044 UBE2D4Q9Y2X8 147 aa2.96□□□□□ -1.94
USP48-211ENST00000526044 IGLV4-60A0A075B6I1 120 aa2.95□□□□□ -1.94
USP48-211ENST00000526044 IGIPA6NJ69 53 aa2.95□□□□□ -1.94
USP48-211ENST00000526044 TSTD3H0UI37 97 aa2.95□□□□□ -1.94
USP48-211ENST00000526044 LEPROTL1O95214 131 aa2.95□□□□□ -1.94
USP48-211ENST00000526044 ANGP03950 147 aaKnown RBP2.95□□□□□ -1.94
USP48-211ENST00000526044 REG3AQ06141 175 aa2.95□□□□□ -1.94
USP48-211ENST00000526044 MPV17L2Q567V2 206 aa2.95□□□□□ -1.94
USP48-211ENST00000526044 TTC32Q5I0X7 151 aa2.95□□□□□ -1.94
USP48-211ENST00000526044 C10orf126Q8N4M7 172 aa2.95□□□□□ -1.94
USP48-211ENST00000526044 TMEM141Q96I45 108 aa2.95□□□□□ -1.94
USP48-211ENST00000526044 CDC42SE2Q9NRR3 84 aa2.95□□□□□ -1.94
USP48-211ENST00000526044 SPANXA1Q9NS26 97 aa2.95□□□□□ -1.94
USP48-211ENST00000526044 KLK12Q9UKR0 248 aa2.95□□□□□ -1.94
USP48-211ENST00000526044 PKIGQ9Y2B9 76 aa2.95□□□□□ -1.94
USP48-211ENST00000526044 DNAH7Q8WXX0 4024 aa2.95□□□□□ -1.94
USP48-211ENST00000526044 PLECQ15149 4684 aaKnown RBP2.94□□□□□ -1.94
USP48-211ENST00000526044 A0A096LNJ9 63 aa2.94□□□□□ -1.94
USP48-211ENST00000526044 TRAV8-3A0A0A6YYJ7 113 aa2.94□□□□□ -1.94
USP48-211ENST00000526044 NBDYA0A0U1RRE5 68 aa2.94□□□□□ -1.94
USP48-211ENST00000526044 IBA57-AS1B1ANH7 110 aa2.94□□□□□ -1.94
USP48-211ENST00000526044 C8orf87E5RJ46 101 aa2.94□□□□□ -1.94
USP48-211ENST00000526044 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.94□□□□□ -1.94
USP48-211ENST00000526044 M0R2N4 97 aa2.94□□□□□ -1.94
USP48-211ENST00000526044 SCGB1A1P11684 91 aa2.94□□□□□ -1.94
USP48-211ENST00000526044 FABP4P15090 132 aa2.94□□□□□ -1.94
USP48-211ENST00000526044 S100A2P29034 98 aa2.94□□□□□ -1.94
USP48-211ENST00000526044 MRPS36P82909 103 aaKnown RBP2.94□□□□□ -1.94
USP48-211ENST00000526044 TEX43Q6ZNM6 134 aa2.94□□□□□ -1.94
USP48-211ENST00000526044 LINC00173Q6ZV60 143 aa2.94□□□□□ -1.94
USP48-211ENST00000526044 LINC00269Q8N2A0 174 aa2.94□□□□□ -1.94
USP48-211ENST00000526044 UBE2WQ96B02 151 aa2.94□□□□□ -1.94
USP48-211ENST00000526044 IFI27L1Q96BM0 104 aa2.94□□□□□ -1.94
USP48-211ENST00000526044 TIMM17AQ99595 171 aa2.94□□□□□ -1.94
USP48-211ENST00000526044 DHRS4-AS1Q9P1J3 65 aa2.94□□□□□ -1.94
USP48-211ENST00000526044 HSPB8Q9UJY1 196 aa2.94□□□□□ -1.94
USP48-211ENST00000526044 TGP01266 2768 aa2.94□□□□□ -1.94
USP48-211ENST00000526044 VPS13DQ5THJ4 4388 aa2.93□□□□□ -1.94
USP48-211ENST00000526044 IGKV3OR2-268A0A0C4DH90 116 aa2.93□□□□□ -1.94
USP48-211ENST00000526044 LCE6AA0A183 80 aa2.93□□□□□ -1.94
USP48-211ENST00000526044 LINC00959A0A1B0GUT2 108 aa2.93□□□□□ -1.94
USP48-211ENST00000526044 A0A1B0GV90 55 aa2.93□□□□□ -1.94
USP48-211ENST00000526044 CCL25O15444 150 aa2.93□□□□□ -1.94
USP48-211ENST00000526044 CRPP02741 224 aa2.93□□□□□ -1.94
USP48-211ENST00000526044 PMVKQ15126 192 aa2.93□□□□□ -1.94
USP48-211ENST00000526044 SS18Q15532 418 aa2.93□□□□□ -1.94
USP48-211ENST00000526044 RNASE13Q5GAN3 156 aaKnown RBP2.93□□□□□ -1.94
USP48-211ENST00000526044 ENHOQ6UWT2 76 aa2.93□□□□□ -1.94
USP48-211ENST00000526044 FAM104AQ969W3 186 aa2.93□□□□□ -1.94
USP48-211ENST00000526044 AMELXQ99217 191 aa2.93□□□□□ -1.94
USP48-211ENST00000526044 C2orf88Q9BSF0 95 aa2.93□□□□□ -1.94
USP48-211ENST00000526044 CST9LQ9H4G1 147 aa2.93□□□□□ -1.94
USP48-211ENST00000526044 STARD9Q9P2P6 4700 aa2.93□□□□□ -1.94
USP48-211ENST00000526044 IGLV10-54A0A075B6I4 117 aa2.92□□□□□ -1.94
USP48-211ENST00000526044 IGKV2D-24A0A075B6R9 120 aa2.92□□□□□ -1.94
USP48-211ENST00000526044 SMIM26A0A096LP01 95 aa2.92□□□□□ -1.94
USP48-211ENST00000526044 TRAV13-1A0A0B4J241 112 aa2.92□□□□□ -1.94
USP48-211ENST00000526044 H0Y9J4 135 aa2.92□□□□□ -1.94
USP48-211ENST00000526044 SEC11AP67812 179 aa2.92□□□□□ -1.94
USP48-211ENST00000526044 MIAQ16674 131 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms