RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 ANKRD17O75179 2603 aaKnown RBP1.71□□□□□ -2.14
SKP1-209ENST00000522552 NHSL1Q5SYE7 1610 aa1.71□□□□□ -2.14
SKP1-209ENST00000522552 H0Y9P7 68 aa1.71□□□□□ -2.14
SKP1-209ENST00000522552 PRB1P04280 392 aa1.71□□□□□ -2.14
SKP1-209ENST00000522552 SPATA8Q6RVD6 105 aa1.71□□□□□ -2.14
SKP1-209ENST00000522552 SMIM11BQ8TCY0 68 aa1.71□□□□□ -2.14
SKP1-209ENST00000522552 FBN1P35555 2871 aaKnown RBP1.7□□□□□ -2.14
SKP1-209ENST00000522552 C5P01031 1676 aa1.7□□□□□ -2.14
SKP1-209ENST00000522552 A0A087WWC5 75 aa1.7□□□□□ -2.14
SKP1-209ENST00000522552 G3V318 75 aa1.7□□□□□ -2.14
SKP1-209ENST00000522552 GCHFRP30047 84 aa1.7□□□□□ -2.14
SKP1-209ENST00000522552 C10orf113Q5VZT2 155 aa1.7□□□□□ -2.14
SKP1-209ENST00000522552 SSC5DA1L4H1 1573 aa1.69□□□□□ -2.14
SKP1-209ENST00000522552 LRRC37A2A6NM11 1700 aa1.69□□□□□ -2.14
SKP1-209ENST00000522552 ATP7BP35670 1465 aa1.69□□□□□ -2.14
SKP1-209ENST00000522552 C1orf167Q5SNV9 1468 aa1.69□□□□□ -2.14
SKP1-209ENST00000522552 ALKQ9UM73 1620 aa1.69□□□□□ -2.14
SKP1-209ENST00000522552 TRBV7-4A0A0J9YYF1 115 aa1.69□□□□□ -2.14
SKP1-209ENST00000522552 SPINK13Q1W4C9 94 aa1.69□□□□□ -2.14
SKP1-209ENST00000522552 CEP170BQ9Y4F5 1589 aaPredicted RBP1.69□□□□□ -2.14
SKP1-209ENST00000522552 ASXL1Q8IXJ9 1541 aa1.69□□□□□ -2.14
SKP1-209ENST00000522552 TARBP1Q13395 1621 aaKnown RBP1.68□□□□□ -2.14
SKP1-209ENST00000522552 A0A087WXM4 84 aa1.68□□□□□ -2.14
SKP1-209ENST00000522552 IFI27P40305 119 aaPredicted RBP1.68□□□□□ -2.14
SKP1-209ENST00000522552 GNGT1P63211 74 aa1.68□□□□□ -2.14
SKP1-209ENST00000522552 LCE3AQ5TA76 89 aa1.68□□□□□ -2.14
SKP1-209ENST00000522552 ATP5EP2Q5VTU8 51 aa1.68□□□□□ -2.14
SKP1-209ENST00000522552 PAPPA2Q9BXP8 1791 aa1.68□□□□□ -2.14
SKP1-209ENST00000522552 PIK3C2BO00750 1634 aa1.68□□□□□ -2.14
SKP1-209ENST00000522552 PKD1L3Q7Z443 1732 aa1.68□□□□□ -2.14
SKP1-209ENST00000522552 AHCTF1Q8WYP5 2266 aa1.68□□□□□ -2.14
SKP1-209ENST00000522552 RPL37P61927 97 aaKnown RBP1.67□□□□□ -2.14
SKP1-209ENST00000522552 KMT2BQ9UMN6 2715 aaPredicted RBP1.67□□□□□ -2.14
SKP1-209ENST00000522552 A0A1B0GUT8 65 aa1.67□□□□□ -2.14
SKP1-209ENST00000522552 COX8AP10176 69 aa1.67□□□□□ -2.14
SKP1-209ENST00000522552 S100A3P33764 101 aa1.67□□□□□ -2.14
SKP1-209ENST00000522552 HILPDAQ9Y5L2 63 aa1.67□□□□□ -2.14
SKP1-209ENST00000522552 NAV3Q8IVL0 2385 aa1.66□□□□□ -2.14
SKP1-209ENST00000522552 NKTRP30414 1462 aaKnown RBP1.66□□□□□ -2.14
SKP1-209ENST00000522552 CD163L1Q9NR16 1453 aa1.66□□□□□ -2.14
SKP1-209ENST00000522552 URB2Q14146 1524 aaKnown RBP1.65□□□□□ -2.14
SKP1-209ENST00000522552 HAMPP81172 84 aa1.65□□□□□ -2.15
SKP1-209ENST00000522552 ZNF831Q5JPB2 1677 aa1.65□□□□□ -2.15
SKP1-209ENST00000522552 CNTRLQ7Z7A1 2325 aa1.65□□□□□ -2.15
SKP1-209ENST00000522552 PLXNB2O15031 1838 aa1.65□□□□□ -2.15
SKP1-209ENST00000522552 ABCA9Q8IUA7 1624 aa1.64□□□□□ -2.15
SKP1-209ENST00000522552 UBR3Q6ZT12 1888 aa1.64□□□□□ -2.15
SKP1-209ENST00000522552 SAMD9Q5K651 1589 aa1.64□□□□□ -2.15
SKP1-209ENST00000522552 H3BVH4 76 aa1.64□□□□□ -2.15
SKP1-209ENST00000522552 CCDC180Q9P1Z9 1646 aa1.64□□□□□ -2.15
SKP1-209ENST00000522552 SORL1Q92673 2214 aa1.63□□□□□ -2.15
SKP1-209ENST00000522552 IFI6P09912 130 aa1.63□□□□□ -2.15
SKP1-209ENST00000522552 SFTA3P0C7M3 94 aa1.63□□□□□ -2.15
SKP1-209ENST00000522552 GOLGA4Q13439 2230 aaKnown RBP1.63□□□□□ -2.15
SKP1-209ENST00000522552 CDC42BPGQ6DT37 1551 aa1.63□□□□□ -2.15
SKP1-209ENST00000522552 XRN1Q8IZH2 1706 aaKnown RBP1.63□□□□□ -2.15
SKP1-209ENST00000522552 JMJD1CQ15652 2540 aa1.63□□□□□ -2.15
SKP1-209ENST00000522552 TRBV6-1A0A0K0K1D8 114 aa1.62□□□□□ -2.15
SKP1-209ENST00000522552 DEFB119Q8N690 84 aa1.62□□□□□ -2.15
SKP1-209ENST00000522552 LRP6O75581 1613 aa1.62□□□□□ -2.15
SKP1-209ENST00000522552 PLCH1Q4KWH8 1693 aa1.62□□□□□ -2.15
SKP1-209ENST00000522552 PIN1P1O15428 100 aa1.61□□□□□ -2.15
SKP1-209ENST00000522552 TIAM2Q8IVF5 1701 aa1.61□□□□□ -2.15
SKP1-209ENST00000522552 EEA1Q15075 1411 aa1.61□□□□□ -2.15
SKP1-209ENST00000522552 TRAV21A0A0B4J279 112 aa1.61□□□□□ -2.15
SKP1-209ENST00000522552 A0A1B0GU69 56 aa1.61□□□□□ -2.15
SKP1-209ENST00000522552 C3orf79P0CE67 100 aa1.61□□□□□ -2.15
SKP1-209ENST00000522552 KRTAP13-1Q8IUC0 172 aa1.61□□□□□ -2.15
SKP1-209ENST00000522552 TIAM1Q13009 1591 aa1.6□□□□□ -2.15
SKP1-209ENST00000522552 PREX2Q70Z35 1606 aa1.6□□□□□ -2.15
SKP1-209ENST00000522552 HMGA1P17096 107 aaKnown RBP1.6□□□□□ -2.15
SKP1-209ENST00000522552 URB1O60287 2271 aaKnown RBP1.59□□□□□ -2.15
SKP1-209ENST00000522552 COL14A1Q05707 1796 aaKnown RBP1.59□□□□□ -2.15
SKP1-209ENST00000522552 K7EIL1 84 aa1.59□□□□□ -2.15
SKP1-209ENST00000522552 NDUFB1O75438 58 aa1.59□□□□□ -2.15
SKP1-209ENST00000522552 DEFB112Q30KQ8 113 aa1.59□□□□□ -2.15
SKP1-209ENST00000522552 SSBP3-AS1Q7Z2R9 100 aa1.59□□□□□ -2.15
SKP1-209ENST00000522552 GNG13Q9P2W3 67 aa1.59□□□□□ -2.15
SKP1-209ENST00000522552 DIP2AQ14689 1571 aa1.59□□□□□ -2.15
SKP1-209ENST00000522552 USP32Q8NFA0 1604 aa1.59□□□□□ -2.16
SKP1-209ENST00000522552 WIZO95785 1651 aa1.59□□□□□ -2.16
SKP1-209ENST00000522552 PARP4Q9UKK3 1724 aaKnown RBP1.59□□□□□ -2.16
SKP1-209ENST00000522552 BCORQ6W2J9 1755 aa1.59□□□□□ -2.16
SKP1-209ENST00000522552 LRRC7Q96NW7 1537 aa1.58□□□□□ -2.16
SKP1-209ENST00000522552 FXYD6-FXYD2A0A087WZ82 144 aa1.58□□□□□ -2.16
SKP1-209ENST00000522552 LINC00959A0A1B0GUT2 108 aa1.58□□□□□ -2.16
SKP1-209ENST00000522552 LYNX1P0DP58 116 aa1.58□□□□□ -2.16
SKP1-209ENST00000522552 KIAA0556O60303 1618 aa1.58□□□□□ -2.16
SKP1-209ENST00000522552 PAPPAQ13219 1627 aa1.58□□□□□ -2.16
SKP1-209ENST00000522552 LMTK2Q8IWU2 1503 aa1.58□□□□□ -2.16
SKP1-209ENST00000522552 RP1L1Q8IWN7 2480 aaPredicted RBP1.58□□□□□ -2.16
SKP1-209ENST00000522552 PREX1Q8TCU6 1659 aa1.58□□□□□ -2.16
SKP1-209ENST00000522552 WFDC9Q8NEX5 89 aa1.58□□□□□ -2.16
SKP1-209ENST00000522552 KRTAP12-4P60329 112 aa1.57□□□□□ -2.16
SKP1-209ENST00000522552 ATXN8Q156A1 80 aa1.57□□□□□ -2.16
SKP1-209ENST00000522552 UBE2DNLQ8IWF7 75 aa1.57□□□□□ -2.16
SKP1-209ENST00000522552 GAFA1Q96PS6 74 aa1.57□□□□□ -2.16
SKP1-209ENST00000522552 NREPQ16612 68 aa1.56□□□□□ -2.16
SKP1-209ENST00000522552 SLIT1O75093 1534 aa1.56□□□□□ -2.16
SKP1-209ENST00000522552 A0A0G2JMZ2 1700 aa1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms