RNA–Protein interactions for RNA: ENST00000519955.1

NPM1-206, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-206ENST00000519955 PRO1933Q9H354 126 aa-1.3□□□□□ -2.62
NPM1-206ENST00000519955 DNAH3Q8TD57 4116 aa-1.3□□□□□ -2.62
NPM1-206ENST00000519955 FASNP49327 2511 aaKnown RBP-1.3□□□□□ -2.62
NPM1-206ENST00000519955 ROCK2O75116 1388 aaKnown RBP-1.31□□□□□ -2.62
NPM1-206ENST00000519955 TACC2O95359 2948 aa-1.31□□□□□ -2.62
NPM1-206ENST00000519955 PKHD1L1Q86WI1 4243 aa-1.31□□□□□ -2.62
NPM1-206ENST00000519955 SYS1-DBNDD2H3BUS1 97 aa-1.31□□□□□ -2.62
NPM1-206ENST00000519955 COX8AP10176 69 aa-1.31□□□□□ -2.62
NPM1-206ENST00000519955 SPRR2EP22531 72 aa-1.31□□□□□ -2.62
NPM1-206ENST00000519955 KLK9Q2XQG4 91 aa-1.31□□□□□ -2.62
NPM1-206ENST00000519955 KRTAP6-2Q3LI66 62 aa-1.31□□□□□ -2.62
NPM1-206ENST00000519955 USMG5Q96IX5 58 aa-1.31□□□□□ -2.62
NPM1-206ENST00000519955 KIAA0556O60303 1618 aa-1.31□□□□□ -2.62
NPM1-206ENST00000519955 PCNX1Q96RV3 2341 aa-1.31□□□□□ -2.62
NPM1-206ENST00000519955 VPS13DQ5THJ4 4388 aa-1.31□□□□□ -2.62
NPM1-206ENST00000519955 MYO18BQ8IUG5 2567 aa-1.31□□□□□ -2.62
NPM1-206ENST00000519955 LAMA2P24043 3122 aaKnown RBP-1.31□□□□□ -2.62
NPM1-206ENST00000519955 IQSEC2Q5JU85 1478 aa-1.31□□□□□ -2.62
NPM1-206ENST00000519955 DNAJC13O75165 2243 aa-1.32□□□□□ -2.62
NPM1-206ENST00000519955 F6UZH7 168 aa-1.32□□□□□ -2.62
NPM1-206ENST00000519955 COX6CP09669 75 aa-1.34□□□□□ -2.62
NPM1-206ENST00000519955 MANBALQ9NQG1 85 aa-1.34□□□□□ -2.62
NPM1-206ENST00000519955 ANKHD1Q8IWZ3 2542 aaKnown RBP-1.34□□□□□ -2.62
NPM1-206ENST00000519955 FAT3Q8TDW7 4589 aa-1.35□□□□□ -2.62
NPM1-206ENST00000519955 SNAPC5O75971 98 aa-1.35□□□□□ -2.63
NPM1-206ENST00000519955 Q0VG73 95 aa-1.35□□□□□ -2.63
NPM1-206ENST00000519955 SCAPERQ9BY12 1400 aa-1.35□□□□□ -2.63
NPM1-206ENST00000519955 MYOM2P54296 1465 aa-1.36□□□□□ -2.63
NPM1-206ENST00000519955 C1orf167Q5SNV9 1468 aa-1.36□□□□□ -2.63
NPM1-206ENST00000519955 A0A1B0GWA3 101 aa-1.36□□□□□ -2.63
NPM1-206ENST00000519955 UBE2D3P61077 147 aa-1.36□□□□□ -2.63
NPM1-206ENST00000519955 UBE2D2P62837 147 aa-1.36□□□□□ -2.63
NPM1-206ENST00000519955 CUL7Q14999 1698 aa-1.36□□□□□ -2.63
NPM1-206ENST00000519955 DNAH2Q9P225 4427 aa-1.37□□□□□ -2.63
NPM1-206ENST00000519955 TRAPPC2P0DI81 140 aa-1.37□□□□□ -2.63
NPM1-206ENST00000519955 TRAPPC2BP0DI82 140 aa-1.37□□□□□ -2.63
NPM1-206ENST00000519955 RPL13AP3Q6NVV1 102 aa-1.37□□□□□ -2.63
NPM1-206ENST00000519955 IER3IP1Q9Y5U9 82 aa-1.37□□□□□ -2.63
NPM1-206ENST00000519955 HTTP42858 3142 aa-1.37□□□□□ -2.63
NPM1-206ENST00000519955 SONP18583 2426 aaKnown RBP-1.37□□□□□ -2.63
NPM1-206ENST00000519955 RYR2Q92736 4967 aa-1.37□□□□□ -2.63
NPM1-206ENST00000519955 DIP2CQ9Y2E4 1556 aa-1.38□□□□□ -2.63
NPM1-206ENST00000519955 PRO1854Q9UHT4 67 aa-1.38□□□□□ -2.63
NPM1-206ENST00000519955 PKD1P98161 4303 aa-1.38□□□□□ -2.63
NPM1-206ENST00000519955 ADGRL2O95490 1459 aa-1.38□□□□□ -2.63
NPM1-206ENST00000519955 LCN9Q8WX39 176 aa-1.39□□□□□ -2.63
NPM1-206ENST00000519955 NALCNQ8IZF0 1738 aa-1.4□□□□□ -2.63
NPM1-206ENST00000519955 SPG11Q96JI7 2443 aa-1.4□□□□□ -2.63
NPM1-206ENST00000519955 NAP1L6A6NFF2 107 aa-1.4□□□□□ -2.63
NPM1-206ENST00000519955 FAM223BA6NKX1 122 aa-1.4□□□□□ -2.63
NPM1-206ENST00000519955 A0A0G2JMZ2 1700 aa-1.4□□□□□ -2.63
NPM1-206ENST00000519955 SFTA2Q6UW10 78 aa-1.41□□□□□ -2.64
NPM1-206ENST00000519955 SVBPQ8N300 66 aa-1.41□□□□□ -2.64
NPM1-206ENST00000519955 SCN7AQ01118 1682 aa-1.42□□□□□ -2.64
NPM1-206ENST00000519955 C12orf57Q99622 126 aa-1.42□□□□□ -2.64
NPM1-206ENST00000519955 MRC2Q9UBG0 1479 aa-1.43□□□□□ -2.64
NPM1-206ENST00000519955 DNAH9Q9NYC9 4486 aa-1.43□□□□□ -2.64
NPM1-206ENST00000519955 LINC00846Q9NV44 126 aa-1.43□□□□□ -2.64
NPM1-206ENST00000519955 APLNQ9ULZ1 77 aa-1.43□□□□□ -2.64
NPM1-206ENST00000519955 TNRC18O15417 2968 aaPredicted RBP-1.43□□□□□ -2.64
NPM1-206ENST00000519955 XRN1Q8IZH2 1706 aaKnown RBP-1.43□□□□□ -2.64
NPM1-206ENST00000519955 SAA2P0DJI9 122 aaPredicted RBP-1.44□□□□□ -2.64
NPM1-206ENST00000519955 GNG4P50150 75 aa-1.44□□□□□ -2.64
NPM1-206ENST00000519955 SEC11AP67812 179 aa-1.44□□□□□ -2.64
NPM1-206ENST00000519955 AKAP9Q99996 3911 aa-1.44□□□□□ -2.64
NPM1-206ENST00000519955 LAMA1P25391 3075 aa-1.45□□□□□ -2.64
NPM1-206ENST00000519955 PRRC2CQ9Y520 2896 aaKnown RBP-1.45□□□□□ -2.64
NPM1-206ENST00000519955 PLECQ15149 4684 aaKnown RBP-1.46□□□□□ -2.64
NPM1-206ENST00000519955 RNF213Q63HN8 5207 aa-1.46□□□□□ -2.64
NPM1-206ENST00000519955 EFCAB10A6NFE3 127 aa-1.46□□□□□ -2.64
NPM1-206ENST00000519955 CPSF4LA6NMK7 179 aaKnown RBP-1.46□□□□□ -2.64
NPM1-206ENST00000519955 TEP1Q99973 2627 aaKnown RBP-1.46□□□□□ -2.64
NPM1-206ENST00000519955 FMN2Q9NZ56 1722 aa-1.46□□□□□ -2.64
NPM1-206ENST00000519955 TOP2BQ02880 1626 aa-1.47□□□□□ -2.64
NPM1-206ENST00000519955 CCDC141Q6ZP82 1450 aa-1.47□□□□□ -2.64
NPM1-206ENST00000519955 DLEU1O43261 78 aa-1.47□□□□□ -2.64
NPM1-206ENST00000519955 PPP3R1P63098 170 aa-1.47□□□□□ -2.64
NPM1-206ENST00000519955 NUP188Q5SRE5 1749 aa-1.47□□□□□ -2.64
NPM1-206ENST00000519955 NIPBLQ6KC79 2804 aaeCLIP-1.48□□□□□ -2.65
NPM1-206ENST00000519955 PLEKHH2Q8IVE3 1493 aa-1.48□□□□□ -2.65
NPM1-206ENST00000519955 H3BQ15 152 aa-1.48□□□□□ -2.65
NPM1-206ENST00000519955 SPTBN4Q9H254 2564 aa-1.48□□□□□ -2.65
NPM1-206ENST00000519955 CUBNO60494 3623 aa-1.48□□□□□ -2.65
NPM1-206ENST00000519955 NLRP1Q9C000 1473 aa-1.5□□□□□ -2.65
NPM1-206ENST00000519955 ANK3Q12955 4377 aaKnown RBP-1.5□□□□□ -2.65
NPM1-206ENST00000519955 CRYM-AS1A6NIL9 109 aa-1.5□□□□□ -2.65
NPM1-206ENST00000519955 SPRR2FQ96RM1 72 aa-1.5□□□□□ -2.65
NPM1-206ENST00000519955 ARHGAP5Q13017 1502 aa-1.5□□□□□ -2.65
NPM1-206ENST00000519955 NRKQ7Z2Y5 1582 aa-1.51□□□□□ -2.65
NPM1-206ENST00000519955 A0A1B0GV90 55 aa-1.51□□□□□ -2.65
NPM1-206ENST00000519955 CORTO00230 105 aa-1.51□□□□□ -2.65
NPM1-206ENST00000519955 AKAP13Q12802 2813 aa-1.51□□□□□ -2.65
NPM1-206ENST00000519955 USP9XQ93008 2570 aaPredicted RBP-1.52□□□□□ -2.65
NPM1-206ENST00000519955 MAPKBP1O60336 1514 aa-1.52□□□□□ -2.65
NPM1-206ENST00000519955 A0A1B0GU69 56 aa-1.53□□□□□ -2.65
NPM1-206ENST00000519955 KRTDAPP60985 99 aa-1.53□□□□□ -2.65
NPM1-206ENST00000519955 DEFB135Q30KP9 77 aa-1.53□□□□□ -2.65
NPM1-206ENST00000519955 TEX15Q9BXT5 2789 aa-1.53□□□□□ -2.66
NPM1-206ENST00000519955 LAMA3Q16787 3333 aa-1.54□□□□□ -2.66
NPM1-206ENST00000519955 CRIPTQ9P021 101 aa-1.54□□□□□ -2.66
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms