RNA–Protein interactions for RNA: ENST00000504012.1

LINC01340-201, Transcript of long intergenic non-protein coding RNA 1340, humanhuman

TSL 3 BASIC

Gene LINC01340, Length 724 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01340-201ENST00000504012 IGKV3-7A0A075B6H7 116 aa4.03□□□□□ -1.76
LINC01340-201ENST00000504012 IGLV4-60A0A075B6I1 120 aa4.03□□□□□ -1.76
LINC01340-201ENST00000504012 CDK2AP2O75956 126 aa4.03□□□□□ -1.76
LINC01340-201ENST00000504012 PRR3P79522 188 aaKnown RBP4.03□□□□□ -1.76
LINC01340-201ENST00000504012 KIAA0087Q14695 138 aa4.03□□□□□ -1.76
LINC01340-201ENST00000504012 HIGD2BQ4VC39 106 aa4.03□□□□□ -1.76
LINC01340-201ENST00000504012 Q6ZQY7 126 aa4.03□□□□□ -1.76
LINC01340-201ENST00000504012 NKAPP1Q8N9T2 125 aa4.03□□□□□ -1.76
LINC01340-201ENST00000504012 ICE1Q9Y2F5 2266 aa4.03□□□□□ -1.76
LINC01340-201ENST00000504012 PTPRQQ9UMZ3 2332 aa4.03□□□□□ -1.77
LINC01340-201ENST00000504012 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.02□□□□□ -1.77
LINC01340-201ENST00000504012 LINC00959A0A1B0GUT2 108 aa4.02□□□□□ -1.77
LINC01340-201ENST00000504012 LRCOL1A6NCL2 159 aa4.02□□□□□ -1.77
LINC01340-201ENST00000504012 IGKV3-20P01619 116 aa4.02□□□□□ -1.77
LINC01340-201ENST00000504012 LCE1DQ5T752 114 aa4.02□□□□□ -1.77
LINC01340-201ENST00000504012 SCXQ7RTU7 201 aa4.02□□□□□ -1.77
LINC01340-201ENST00000504012 LINC01006Q8NI28 216 aa4.02□□□□□ -1.77
LINC01340-201ENST00000504012 KCNQ1DNQ9H478 68 aa4.02□□□□□ -1.77
LINC01340-201ENST00000504012 A0A1B0GUV1 79 aa4.01□□□□□ -1.77
LINC01340-201ENST00000504012 PATE3B3GLJ2 98 aa4.01□□□□□ -1.77
LINC01340-201ENST00000504012 C19orf84I3L1E1 186 aa4.01□□□□□ -1.77
LINC01340-201ENST00000504012 INSP01308 110 aa4.01□□□□□ -1.77
LINC01340-201ENST00000504012 C9orf116Q5BN46 136 aaPredicted RBP4.01□□□□□ -1.77
LINC01340-201ENST00000504012 C11orf71Q6IPW1 123 aa4.01□□□□□ -1.77
LINC01340-201ENST00000504012 LINC00612Q8N6U2 182 aa4.01□□□□□ -1.77
LINC01340-201ENST00000504012 LINC00208Q96KT6 92 aa4.01□□□□□ -1.77
LINC01340-201ENST00000504012 ZFP36P26651 326 aaKnown RBP4□□□□□ -1.77
LINC01340-201ENST00000504012 SMIM29Q86T20 159 aa4□□□□□ -1.77
LINC01340-201ENST00000504012 SPTSSBQ8NFR3 76 aa4□□□□□ -1.77
LINC01340-201ENST00000504012 PRR15LQ9BU68 103 aa4□□□□□ -1.77
LINC01340-201ENST00000504012 KRTAP17-1Q9BYP8 105 aa4□□□□□ -1.77
LINC01340-201ENST00000504012 PLAC8Q9NZF1 115 aa4□□□□□ -1.77
LINC01340-201ENST00000504012 LINC01558Q9Y6Z2 57 aa4□□□□□ -1.77
LINC01340-201ENST00000504012 TRANK1O15050 2925 aa3.99□□□□□ -1.77
LINC01340-201ENST00000504012 A0A0J9YWU9 116 aa3.99□□□□□ -1.77
LINC01340-201ENST00000504012 A6NDX4 124 aa3.99□□□□□ -1.77
LINC01340-201ENST00000504012 A6NED7 52 aa3.99□□□□□ -1.77
LINC01340-201ENST00000504012 C3orf84H3BNL1 204 aa3.99□□□□□ -1.77
LINC01340-201ENST00000504012 MP68P56378 58 aa3.99□□□□□ -1.77
LINC01340-201ENST00000504012 MOBPQ13875 183 aa3.99□□□□□ -1.77
LINC01340-201ENST00000504012 FBXL19-AS1Q494R0 122 aa3.99□□□□□ -1.77
LINC01340-201ENST00000504012 CHD9Q3L8U1 2897 aa3.99□□□□□ -1.77
LINC01340-201ENST00000504012 IGLV5-48A0A075B6I7 105 aa3.98□□□□□ -1.77
LINC01340-201ENST00000504012 GVQW2A0A096LPI5 108 aaPredicted RBP3.98□□□□□ -1.77
LINC01340-201ENST00000504012 A8MU10 97 aa3.98□□□□□ -1.77
LINC01340-201ENST00000504012 CNBPP62633 177 aaKnown RBP3.98□□□□□ -1.77
LINC01340-201ENST00000504012 TRGV4A0A0C4DH28 118 aa3.97□□□□□ -1.77
LINC01340-201ENST00000504012 PRM2P04554 102 aa3.97□□□□□ -1.77
LINC01340-201ENST00000504012 HTN1P15515 57 aa3.97□□□□□ -1.77
LINC01340-201ENST00000504012 DEFB131AP59861 70 aa3.97□□□□□ -1.77
LINC01340-201ENST00000504012 LINC01554Q52M75 96 aa3.97□□□□□ -1.77
LINC01340-201ENST00000504012 C10orf25Q5T742 122 aa3.97□□□□□ -1.77
LINC01340-201ENST00000504012 Q8N9L7 120 aa3.97□□□□□ -1.77
LINC01340-201ENST00000504012 KRTAP4-2Q9BYR5 136 aa3.97□□□□□ -1.77
LINC01340-201ENST00000504012 DOPEY2Q9Y3R5 2298 aa3.97□□□□□ -1.77
LINC01340-201ENST00000504012 UTRNP46939 3433 aa3.96□□□□□ -1.77
LINC01340-201ENST00000504012 TRGV1A0A0A0MS02 117 aa3.96□□□□□ -1.78
LINC01340-201ENST00000504012 HTTP42858 3142 aa3.96□□□□□ -1.78
LINC01340-201ENST00000504012 KRTAP19-1Q8IUB9 90 aa3.95□□□□□ -1.78
LINC01340-201ENST00000504012 SPRR4Q96PI1 79 aa3.95□□□□□ -1.78
LINC01340-201ENST00000504012 KRTAP4-9Q9BYQ8 210 aa3.95□□□□□ -1.78
LINC01340-201ENST00000504012 WFDC10AQ9H1F0 79 aa3.95□□□□□ -1.78
LINC01340-201ENST00000504012 PLA2G2DQ9UNK4 145 aa3.95□□□□□ -1.78
LINC01340-201ENST00000504012 SDK1Q7Z5N4 2213 aa3.95□□□□□ -1.78
LINC01340-201ENST00000504012 CHD7Q9P2D1 2997 aa3.94□□□□□ -1.78
LINC01340-201ENST00000504012 IGLV7-46A0A075B6I9 117 aa3.94□□□□□ -1.78
LINC01340-201ENST00000504012 CMC4P56277 68 aaPredicted RBP3.94□□□□□ -1.78
LINC01340-201ENST00000504012 DSCR9P59020 149 aa3.94□□□□□ -1.78
LINC01340-201ENST00000504012 DEFB109BQ30KR1 87 aa3.94□□□□□ -1.78
LINC01340-201ENST00000504012 CASC2Q6XLA1 102 aa3.94□□□□□ -1.78
LINC01340-201ENST00000504012 C9orf163Q8N9P6 203 aa3.94□□□□□ -1.78
LINC01340-201ENST00000504012 Q8NDZ9 215 aa3.94□□□□□ -1.78
LINC01340-201ENST00000504012 CACNA1BQ00975 2339 aa3.94□□□□□ -1.78
LINC01340-201ENST00000504012 IGHV6-1A0A0B4J1U7 121 aa3.93□□□□□ -1.78
LINC01340-201ENST00000504012 DSCR10P59022 87 aa3.93□□□□□ -1.78
LINC01340-201ENST00000504012 KPRPQ5T749 579 aaPredicted RBP3.93□□□□□ -1.78
LINC01340-201ENST00000504012 ST20-AS1Q8NBB2 130 aa3.93□□□□□ -1.78
LINC01340-201ENST00000504012 CHCHD10Q8WYQ3 142 aaPredicted RBP3.93□□□□□ -1.78
LINC01340-201ENST00000504012 KLK12Q9UKR0 248 aa3.93□□□□□ -1.78
LINC01340-201ENST00000504012 MED13LQ71F56 2210 aa3.93□□□□□ -1.78
LINC01340-201ENST00000504012 Q8NBF4 154 aa3.92□□□□□ -1.78
LINC01340-201ENST00000504012 C16orf74Q96GX8 76 aa3.92□□□□□ -1.78
LINC01340-201ENST00000504012 CUL9Q8IWT3 2517 aa3.91□□□□□ -1.78
LINC01340-201ENST00000504012 IGKV3OR2-268A0A0C4DH90 116 aa3.91□□□□□ -1.78
LINC01340-201ENST00000504012 LINC00313P59037 77 aa3.91□□□□□ -1.78
LINC01340-201ENST00000504012 ODF3L2Q3SX64 289 aa3.91□□□□□ -1.78
LINC01340-201ENST00000504012 COA5Q86WW8 74 aa3.91□□□□□ -1.78
LINC01340-201ENST00000504012 CEP250Q9BV73 2442 aa3.91□□□□□ -1.78
LINC01340-201ENST00000504012 TECTAO75443 2155 aa3.9□□□□□ -1.78
LINC01340-201ENST00000504012 SPTBN1Q01082 2364 aaKnown RBP3.9□□□□□ -1.78
LINC01340-201ENST00000504012 NBEAQ8NFP9 2946 aa3.9□□□□□ -1.78
LINC01340-201ENST00000504012 IGKV2D-24A0A075B6R9 120 aa3.9□□□□□ -1.79
LINC01340-201ENST00000504012 IGLV9-49A0A0B4J1Y8 123 aa3.9□□□□□ -1.79
LINC01340-201ENST00000504012 SPAG11BQ08648 103 aa3.9□□□□□ -1.79
LINC01340-201ENST00000504012 ROS1P08922 2347 aa3.9□□□□□ -1.79
LINC01340-201ENST00000504012 RANBP2P49792 3224 aaKnown RBP3.9□□□□□ -1.79
LINC01340-201ENST00000504012 SPTBN2O15020 2390 aa3.89□□□□□ -1.79
LINC01340-201ENST00000504012 A0A1W2PNM2 257 aa3.89□□□□□ -1.79
LINC01340-201ENST00000504012 KRTAP29-1A8MX34 341 aaPredicted RBP3.89□□□□□ -1.79
LINC01340-201ENST00000504012 FAM229AH3BQW9 127 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 117.9 ms