RNA–Protein interactions for RNA: ENST00000496050.1

SSR3-208, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-208ENST00000496050 RABAC1Q9UI14 185 aa0.75□□□□□ -2.29
SSR3-208ENST00000496050 ZANQ9Y493 2812 aa0.75□□□□□ -2.29
SSR3-208ENST00000496050 ATRQ13535 2644 aa0.75□□□□□ -2.29
SSR3-208ENST00000496050 SSPOA2VEC9 5147 aa0.75□□□□□ -2.29
SSR3-208ENST00000496050 ITPR1Q14643 2758 aa0.74□□□□□ -2.29
SSR3-208ENST00000496050 FANCAO15360 1455 aa0.74□□□□□ -2.29
SSR3-208ENST00000496050 IQSEC2Q5JU85 1478 aa0.74□□□□□ -2.29
SSR3-208ENST00000496050 CEP162Q5TB80 1403 aa0.74□□□□□ -2.29
SSR3-208ENST00000496050 BOD1L1Q8NFC6 3051 aa0.74□□□□□ -2.29
SSR3-208ENST00000496050 C2CD3Q4AC94 2353 aa0.74□□□□□ -2.29
SSR3-208ENST00000496050 UQCRHLA0A096LP55 91 aa0.74□□□□□ -2.29
SSR3-208ENST00000496050 FAM223BA6NKX1 122 aa0.74□□□□□ -2.29
SSR3-208ENST00000496050 UQCRHP07919 91 aa0.74□□□□□ -2.29
SSR3-208ENST00000496050 NMBP08949 121 aa0.74□□□□□ -2.29
SSR3-208ENST00000496050 GCHFRP30047 84 aa0.74□□□□□ -2.29
SSR3-208ENST00000496050 TDRG1Q3Y452 100 aa0.74□□□□□ -2.29
SSR3-208ENST00000496050 LINC01600Q96MT4 127 aa0.74□□□□□ -2.29
SSR3-208ENST00000496050 HIGD1BQ9P298 99 aa0.74□□□□□ -2.29
SSR3-208ENST00000496050 NBEAL1Q6ZS30 2694 aa0.74□□□□□ -2.29
SSR3-208ENST00000496050 UNC13BO14795 1591 aa0.74□□□□□ -2.29
SSR3-208ENST00000496050 ARHGEF12Q9NZN5 1544 aa0.74□□□□□ -2.29
SSR3-208ENST00000496050 TCHHQ07283 1943 aa0.74□□□□□ -2.29
SSR3-208ENST00000496050 ATP10BO94823 1461 aa0.73□□□□□ -2.29
SSR3-208ENST00000496050 NRXN1Q9ULB1 1477 aa0.73□□□□□ -2.29
SSR3-208ENST00000496050 SBF2Q86WG5 1849 aa0.73□□□□□ -2.29
SSR3-208ENST00000496050 SONP18583 2426 aaKnown RBP0.73□□□□□ -2.29
SSR3-208ENST00000496050 HMGN3Q15651 99 aa0.73□□□□□ -2.29
SSR3-208ENST00000496050 TMEM263Q8WUH6 116 aaKnown RBP0.73□□□□□ -2.29
SSR3-208ENST00000496050 S100A16Q96FQ6 103 aaKnown RBP0.73□□□□□ -2.29
SSR3-208ENST00000496050 PRR15LQ9BU68 103 aa0.73□□□□□ -2.29
SSR3-208ENST00000496050 DNAH12Q6ZR08 3092 aa0.73□□□□□ -2.29
SSR3-208ENST00000496050 CACNA1EQ15878 2313 aa0.73□□□□□ -2.29
SSR3-208ENST00000496050 CEP295Q9C0D2 2601 aa0.73□□□□□ -2.29
SSR3-208ENST00000496050 POLQO75417 2590 aa0.73□□□□□ -2.29
SSR3-208ENST00000496050 CCDC18Q5T9S5 1454 aa0.73□□□□□ -2.29
SSR3-208ENST00000496050 ARHGAP35Q9NRY4 1499 aa0.73□□□□□ -2.29
SSR3-208ENST00000496050 UTP20O75691 2785 aaKnown RBP0.73□□□□□ -2.29
SSR3-208ENST00000496050 FAT4Q6V0I7 4981 aa0.73□□□□□ -2.29
SSR3-208ENST00000496050 MDN1Q9NU22 5596 aa0.72□□□□□ -2.29
SSR3-208ENST00000496050 IFT172Q9UG01 1749 aa0.72□□□□□ -2.29
SSR3-208ENST00000496050 PDE4DIPQ5VU43 2346 aa0.72□□□□□ -2.29
SSR3-208ENST00000496050 CFAP46Q8IYW2 2715 aa0.72□□□□□ -2.29
SSR3-208ENST00000496050 A0A1B0GWA3 101 aa0.72□□□□□ -2.29
SSR3-208ENST00000496050 ZNF815PA8K554 130 aa0.72□□□□□ -2.29
SSR3-208ENST00000496050 KMT2DO14686 5537 aa0.72□□□□□ -2.29
SSR3-208ENST00000496050 CYB5AP00167 134 aa0.72□□□□□ -2.29
SSR3-208ENST00000496050 CSMD1Q96PZ7 3565 aa0.72□□□□□ -2.29
SSR3-208ENST00000496050 UACAQ9BZF9 1416 aa0.72□□□□□ -2.29
SSR3-208ENST00000496050 KDM5AP29375 1690 aaKnown RBP0.72□□□□□ -2.29
SSR3-208ENST00000496050 RAPGEF6Q8TEU7 1601 aa0.71□□□□□ -2.3
SSR3-208ENST00000496050 MUC5ACP98088 5654 aa0.71□□□□□ -2.3
SSR3-208ENST00000496050 C7orf77A4D0Y5 90 aa0.71□□□□□ -2.3
SSR3-208ENST00000496050 M0R3E3 92 aa0.71□□□□□ -2.3
SSR3-208ENST00000496050 PEA15Q15121 130 aa0.71□□□□□ -2.3
SSR3-208ENST00000496050 KRTAP21-1Q3LI58 79 aa0.71□□□□□ -2.3
SSR3-208ENST00000496050 PSMG4Q5JS54 123 aa0.71□□□□□ -2.3
SSR3-208ENST00000496050 ALKAL2Q6UX46 152 aa0.71□□□□□ -2.3
SSR3-208ENST00000496050 KIF21AQ7Z4S6 1674 aa0.71□□□□□ -2.3
SSR3-208ENST00000496050 RANBP2P49792 3224 aaKnown RBP0.71□□□□□ -2.3
SSR3-208ENST00000496050 TENM2Q9NT68 2774 aa0.71□□□□□ -2.3
SSR3-208ENST00000496050 TOP2BQ02880 1626 aa0.71□□□□□ -2.3
SSR3-208ENST00000496050 ZNF236Q9UL36 1845 aa0.71□□□□□ -2.3
SSR3-208ENST00000496050 ZFHX3Q15911 3703 aa0.71□□□□□ -2.3
SSR3-208ENST00000496050 SPEGQ15772 3267 aa0.7□□□□□ -2.3
SSR3-208ENST00000496050 ABCC2Q92887 1545 aa0.7□□□□□ -2.3
SSR3-208ENST00000496050 LRRC37A2A6NM11 1700 aa0.7□□□□□ -2.3
SSR3-208ENST00000496050 ARMS2P0C7Q2 107 aa0.7□□□□□ -2.3
SSR3-208ENST00000496050 SMIM11AP58511 58 aa0.7□□□□□ -2.3
SSR3-208ENST00000496050 PSENENQ9NZ42 101 aa0.7□□□□□ -2.3
SSR3-208ENST00000496050 GVINP1Q7Z2Y8 2422 aa0.7□□□□□ -2.3
SSR3-208ENST00000496050 RNF213Q63HN8 5207 aa0.7□□□□□ -2.3
SSR3-208ENST00000496050 EDC4Q6P2E9 1401 aaKnown RBP0.7□□□□□ -2.3
SSR3-208ENST00000496050 MEGF8Q7Z7M0 2845 aa0.7□□□□□ -2.3
SSR3-208ENST00000496050 CACNA1HO95180 2353 aa0.69□□□□□ -2.3
SSR3-208ENST00000496050 POLA1P09884 1462 aaPredicted RBP0.69□□□□□ -2.3
SSR3-208ENST00000496050 NLRP1Q9C000 1473 aa0.69□□□□□ -2.3
SSR3-208ENST00000496050 ACACBO00763 2458 aa0.69□□□□□ -2.3
SSR3-208ENST00000496050 F8WEM9 126 aa0.69□□□□□ -2.3
SSR3-208ENST00000496050 SNRPFP62306 86 aaKnown RBP0.69□□□□□ -2.3
SSR3-208ENST00000496050 ETDBQ3ZM63 59 aa0.69□□□□□ -2.3
SSR3-208ENST00000496050 Q6JHZ5 121 aa0.69□□□□□ -2.3
SSR3-208ENST00000496050 MYO7BQ6PIF6 2116 aa0.69□□□□□ -2.3
SSR3-208ENST00000496050 ZNF720Q7Z2F6 126 aa0.69□□□□□ -2.3
SSR3-208ENST00000496050 S100A13Q99584 98 aa0.69□□□□□ -2.3
SSR3-208ENST00000496050 CADP27708 2225 aa0.69□□□□□ -2.3
SSR3-208ENST00000496050 ASXL3Q9C0F0 2248 aa0.69□□□□□ -2.3
SSR3-208ENST00000496050 MKI67P46013 3256 aaKnown RBP0.68□□□□□ -2.3
SSR3-208ENST00000496050 H3BQF6 201 aa0.68□□□□□ -2.3
SSR3-208ENST00000496050 HMGN2P05204 90 aaKnown RBP0.68□□□□□ -2.3
SSR3-208ENST00000496050 NMSQ5H8A3 153 aa0.68□□□□□ -2.3
SSR3-208ENST00000496050 C10orf113Q5VZT2 155 aa0.68□□□□□ -2.3
SSR3-208ENST00000496050 UBE2DNLQ8IWF7 75 aa0.68□□□□□ -2.3
SSR3-208ENST00000496050 TEX15Q9BXT5 2789 aa0.68□□□□□ -2.3
SSR3-208ENST00000496050 STAB2Q8WWQ8 2551 aa0.68□□□□□ -2.3
SSR3-208ENST00000496050 MXRA5Q9NR99 2828 aa0.68□□□□□ -2.3
SSR3-208ENST00000496050 MAGI2Q86UL8 1455 aa0.67□□□□□ -2.3
SSR3-208ENST00000496050 MON2Q7Z3U7 1717 aa0.67□□□□□ -2.3
SSR3-208ENST00000496050 ACYP1P07311 99 aa0.67□□□□□ -2.3
SSR3-208ENST00000496050 KRTAP2-3P0C7H8 128 aa0.67□□□□□ -2.3
SSR3-208ENST00000496050 WFDC2Q14508 124 aa0.67□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms