RNA–Protein interactions for RNA: ENST00000488386.5

CDHR3-213, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 540 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-213ENST00000488386 KIAA1644Q3SXP7 199 aa3.65□□□□□ -1.83
CDHR3-213ENST00000488386 PHF5AQ7RTV0 110 aaKnown RBP3.65□□□□□ -1.83
CDHR3-213ENST00000488386 ORMDL3Q8N138 153 aa3.65□□□□□ -1.83
CDHR3-213ENST00000488386 LITAFQ99732 161 aa3.65□□□□□ -1.83
CDHR3-213ENST00000488386 TIMM21Q9BVV7 248 aa3.65□□□□□ -1.83
CDHR3-213ENST00000488386 IGLV4-3A0A075B6K6 122 aa3.64□□□□□ -1.83
CDHR3-213ENST00000488386 IGHV3OR16-9A0A0B4J2B5 98 aa3.64□□□□□ -1.83
CDHR3-213ENST00000488386 LOC107984640A0A0U1RRK4 108 aa3.64□□□□□ -1.83
CDHR3-213ENST00000488386 APOMO95445 188 aa3.64□□□□□ -1.83
CDHR3-213ENST00000488386 RAB5AP20339 215 aa3.64□□□□□ -1.83
CDHR3-213ENST00000488386 IFI27P40305 119 aaPredicted RBP3.64□□□□□ -1.83
CDHR3-213ENST00000488386 C9orf116Q5BN46 136 aaPredicted RBP3.64□□□□□ -1.83
CDHR3-213ENST00000488386 LINC00242Q5T6M2 205 aa3.64□□□□□ -1.83
CDHR3-213ENST00000488386 C2orf82Q6UX34 121 aa3.64□□□□□ -1.83
CDHR3-213ENST00000488386 UNQ6190/PRO20217Q6UXQ8 127 aa3.64□□□□□ -1.83
CDHR3-213ENST00000488386 ATP5L2Q7Z4Y8 100 aa3.64□□□□□ -1.83
CDHR3-213ENST00000488386 KRTAP11-1Q8IUC1 163 aa3.64□□□□□ -1.83
CDHR3-213ENST00000488386 IMMP2LQ96T52 175 aa3.64□□□□□ -1.83
CDHR3-213ENST00000488386 SPANXA1Q9NS26 97 aa3.64□□□□□ -1.83
CDHR3-213ENST00000488386 C6orf48Q9UBA6 75 aa3.64□□□□□ -1.83
CDHR3-213ENST00000488386 PPBPP02775 128 aa3.63□□□□□ -1.83
CDHR3-213ENST00000488386 MT-ND4LP03901 98 aa3.63□□□□□ -1.83
CDHR3-213ENST00000488386 MRPS36P82909 103 aaKnown RBP3.63□□□□□ -1.83
CDHR3-213ENST00000488386 SMAGPQ0VAQ4 97 aa3.63□□□□□ -1.83
CDHR3-213ENST00000488386 C2orf66Q6UXQ4 117 aa3.63□□□□□ -1.83
CDHR3-213ENST00000488386 LINC00173Q6ZV60 143 aa3.63□□□□□ -1.83
CDHR3-213ENST00000488386 NOTCH2NLQ7Z3S9 236 aa3.63□□□□□ -1.83
CDHR3-213ENST00000488386 FAM19A5Q7Z5A7 132 aaPredicted RBP3.63□□□□□ -1.83
CDHR3-213ENST00000488386 Q8N8P6 123 aa3.63□□□□□ -1.83
CDHR3-213ENST00000488386 C2orf48Q96LS8 159 aa3.63□□□□□ -1.83
CDHR3-213ENST00000488386 SEC11CQ9BY50 192 aa3.63□□□□□ -1.83
CDHR3-213ENST00000488386 MAP1LC3AQ9H492 121 aa3.63□□□□□ -1.83
CDHR3-213ENST00000488386 NDUFA1O15239 70 aa3.62□□□□□ -1.83
CDHR3-213ENST00000488386 UBE2D1P51668 147 aa3.62□□□□□ -1.83
CDHR3-213ENST00000488386 KIAA0087Q14695 138 aa3.62□□□□□ -1.83
CDHR3-213ENST00000488386 C10orf91Q5T1B1 145 aa3.62□□□□□ -1.83
CDHR3-213ENST00000488386 TEX43Q6ZNM6 134 aa3.62□□□□□ -1.83
CDHR3-213ENST00000488386 Q6ZRP5 223 aa3.62□□□□□ -1.83
CDHR3-213ENST00000488386 KRTAP7-1Q8IUC3 87 aa3.62□□□□□ -1.83
CDHR3-213ENST00000488386 OR10D4PQ8NGN7 298 aa3.62□□□□□ -1.83
CDHR3-213ENST00000488386 TMEM141Q96I45 108 aa3.62□□□□□ -1.83
CDHR3-213ENST00000488386 TOMM7Q9P0U1 55 aa3.62□□□□□ -1.83
CDHR3-213ENST00000488386 LINC00474Q9P2X8 69 aa3.62□□□□□ -1.83
CDHR3-213ENST00000488386 PSORS1C2Q9UIG4 136 aa3.62□□□□□ -1.83
CDHR3-213ENST00000488386 TRAV9-1A0A075B6T8 112 aa3.61□□□□□ -1.83
CDHR3-213ENST00000488386 TGIF2-C20orf24A0A0A6YYL0 155 aa3.61□□□□□ -1.83
CDHR3-213ENST00000488386 TMEM218A2RU14 115 aa3.61□□□□□ -1.83
CDHR3-213ENST00000488386 KRTAP10-7P60409 375 aaPredicted RBP3.61□□□□□ -1.83
CDHR3-213ENST00000488386 SRSF9Q13242 221 aaKnown RBP eCLIP3.61□□□□□ -1.83
CDHR3-213ENST00000488386 C1orf137Q5JT78 98 aa3.61□□□□□ -1.83
CDHR3-213ENST00000488386 COMMD7Q86VX2 200 aa3.61□□□□□ -1.83
CDHR3-213ENST00000488386 LINC00469Q8N7U9 141 aa3.61□□□□□ -1.83
CDHR3-213ENST00000488386 MRPL35Q9NZE8 188 aaKnown RBP3.61□□□□□ -1.83
CDHR3-213ENST00000488386 CYSLTR1Q9Y271 337 aa3.61□□□□□ -1.83
CDHR3-213ENST00000488386 CARHSP1Q9Y2V2 147 aaKnown RBP3.61□□□□□ -1.83
CDHR3-213ENST00000488386 PYGO1Q9Y3Y4 419 aa3.61□□□□□ -1.83
CDHR3-213ENST00000488386 LRP2P98164 4655 aa3.6□□□□□ -1.83
CDHR3-213ENST00000488386 A0A087WZ39 114 aa3.6□□□□□ -1.83
CDHR3-213ENST00000488386 IGIPA6NJ69 53 aa3.6□□□□□ -1.83
CDHR3-213ENST00000488386 MT-ND6P03923 174 aa3.6□□□□□ -1.83
CDHR3-213ENST00000488386 RHEBQ15382 184 aa3.6□□□□□ -1.83
CDHR3-213ENST00000488386 C9orf129Q5T035 196 aaKnown RBP3.6□□□□□ -1.83
CDHR3-213ENST00000488386 SPINK6Q6UWN8 80 aa3.6□□□□□ -1.83
CDHR3-213ENST00000488386 LINC01600Q96MT4 127 aa3.6□□□□□ -1.83
CDHR3-213ENST00000488386 AMELXQ99217 191 aa3.6□□□□□ -1.83
CDHR3-213ENST00000488386 C2orf88Q9BSF0 95 aa3.6□□□□□ -1.83
CDHR3-213ENST00000488386 VCX2Q9H322 139 aa3.6□□□□□ -1.83
CDHR3-213ENST00000488386 A0A087X002 238 aa3.59□□□□□ -1.83
CDHR3-213ENST00000488386 ORMDL2Q53FV1 153 aa3.59□□□□□ -1.83
CDHR3-213ENST00000488386 Q6ZN92 141 aa3.59□□□□□ -1.83
CDHR3-213ENST00000488386 XAGE1AQ9HD64 81 aa3.59□□□□□ -1.83
CDHR3-213ENST00000488386 CDKN2A-AS1Q9UH64 79 aa3.59□□□□□ -1.83
CDHR3-213ENST00000488386 PKIGQ9Y2B9 76 aa3.59□□□□□ -1.83
CDHR3-213ENST00000488386 LAMTOR2Q9Y2Q5 125 aa3.59□□□□□ -1.83
CDHR3-213ENST00000488386 LPAP08519 4548 aa3.59□□□□□ -1.84
CDHR3-213ENST00000488386 IGLV9-49A0A0B4J1Y8 123 aa3.58□□□□□ -1.84
CDHR3-213ENST00000488386 M0QXV9 152 aa3.58□□□□□ -1.84
CDHR3-213ENST00000488386 TLX1NBP0CAT3 122 aa3.58□□□□□ -1.84
CDHR3-213ENST00000488386 KRTAP10-8P60410 259 aa3.58□□□□□ -1.84
CDHR3-213ENST00000488386 NDUFA5Q16718 116 aa3.58□□□□□ -1.84
CDHR3-213ENST00000488386 COX19Q49B96 90 aa3.58□□□□□ -1.84
CDHR3-213ENST00000488386 LCE1FQ5T754 118 aa3.58□□□□□ -1.84
CDHR3-213ENST00000488386 TOMM6Q96B49 74 aa3.58□□□□□ -1.84
CDHR3-213ENST00000488386 PRAC1Q96KF2 57 aa3.58□□□□□ -1.84
CDHR3-213ENST00000488386 PACRGQ96M98 296 aaPredicted RBP3.58□□□□□ -1.84
CDHR3-213ENST00000488386 SCGB3A1Q96QR1 104 aa3.58□□□□□ -1.84
CDHR3-213ENST00000488386 ALKBH7Q9BT30 221 aaPredicted RBP3.58□□□□□ -1.84
CDHR3-213ENST00000488386 NXT2Q9NPJ8 142 aaKnown RBP3.58□□□□□ -1.84
CDHR3-213ENST00000488386 RPS10P5Q9NQ39 176 aa3.58□□□□□ -1.84
CDHR3-213ENST00000488386 TRBV30A0A0K0K1B3 111 aa3.57□□□□□ -1.84
CDHR3-213ENST00000488386 NDUFC2-KCTD14E9PQ53 114 aa3.57□□□□□ -1.84
CDHR3-213ENST00000488386 K7EMI3 77 aa3.57□□□□□ -1.84
CDHR3-213ENST00000488386 IGLV7-43P04211 117 aa3.57□□□□□ -1.84
CDHR3-213ENST00000488386 SPINK8P0C7L1 97 aa3.57□□□□□ -1.84
CDHR3-213ENST00000488386 CKS1BP61024 79 aa3.57□□□□□ -1.84
CDHR3-213ENST00000488386 UBE2BP63146 152 aa3.57□□□□□ -1.84
CDHR3-213ENST00000488386 FABP9Q0Z7S8 132 aa3.57□□□□□ -1.84
CDHR3-213ENST00000488386 PMCHL1Q16048 86 aa3.57□□□□□ -1.84
CDHR3-213ENST00000488386 C6orf226Q5I0X4 101 aa3.57□□□□□ -1.84
CDHR3-213ENST00000488386 REG3GQ6UW15 175 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms