RNA–Protein interactions for RNA: ENST00000488131.1

CDC42BPA-213, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-213ENST00000488131 DMXL2Q8TDJ6 3036 aa3.26□□□□□ -1.89
CDC42BPA-213ENST00000488131 IGKV3-7A0A075B6H7 116 aa3.26□□□□□ -1.89
CDC42BPA-213ENST00000488131 TRBV10-1A0A0K0K1A3 114 aa3.26□□□□□ -1.89
CDC42BPA-213ENST00000488131 IGHV4-31P0DP07 118 aa3.26□□□□□ -1.89
CDC42BPA-213ENST00000488131 LINC00158P58513 81 aa3.26□□□□□ -1.89
CDC42BPA-213ENST00000488131 NTM-AS1Q6ZSK4 140 aa3.26□□□□□ -1.89
CDC42BPA-213ENST00000488131 PRR26Q8N8Z3 221 aa3.26□□□□□ -1.89
CDC42BPA-213ENST00000488131 OCR1Q9BZK8 76 aa3.26□□□□□ -1.89
CDC42BPA-213ENST00000488131 C11orf68Q9H3H3 251 aaKnown RBP3.26□□□□□ -1.89
CDC42BPA-213ENST00000488131 MED13LQ71F56 2210 aa3.26□□□□□ -1.89
CDC42BPA-213ENST00000488131 CEP290O15078 2479 aa3.26□□□□□ -1.89
CDC42BPA-213ENST00000488131 RP1L1Q8IWN7 2480 aaPredicted RBP3.26□□□□□ -1.89
CDC42BPA-213ENST00000488131 LCE6AA0A183 80 aa3.26□□□□□ -1.89
CDC42BPA-213ENST00000488131 PIEZO2Q9H5I5 2752 aa3.26□□□□□ -1.89
CDC42BPA-213ENST00000488131 A0A087WZ39 114 aa3.25□□□□□ -1.89
CDC42BPA-213ENST00000488131 IGHV3OR16-9A0A0B4J2B5 98 aa3.25□□□□□ -1.89
CDC42BPA-213ENST00000488131 BPY2O14599 106 aa3.25□□□□□ -1.89
CDC42BPA-213ENST00000488131 LY6HO94772 140 aa3.25□□□□□ -1.89
CDC42BPA-213ENST00000488131 HAMPP81172 84 aa3.25□□□□□ -1.89
CDC42BPA-213ENST00000488131 LINC00575Q6W349 94 aa3.25□□□□□ -1.89
CDC42BPA-213ENST00000488131 Q6ZRP5 223 aa3.25□□□□□ -1.89
CDC42BPA-213ENST00000488131 M0R2N4 97 aa3.24□□□□□ -1.89
CDC42BPA-213ENST00000488131 IGKV3-20P01619 116 aa3.24□□□□□ -1.89
CDC42BPA-213ENST00000488131 IGHV3-11P01762 117 aa3.24□□□□□ -1.89
CDC42BPA-213ENST00000488131 DAD1P61803 113 aa3.24□□□□□ -1.89
CDC42BPA-213ENST00000488131 C11orf71Q6IPW1 123 aa3.24□□□□□ -1.89
CDC42BPA-213ENST00000488131 CACNA1BQ00975 2339 aa3.24□□□□□ -1.89
CDC42BPA-213ENST00000488131 TACC2O95359 2948 aa3.24□□□□□ -1.89
CDC42BPA-213ENST00000488131 TMEM89A2RUT3 159 aa3.24□□□□□ -1.89
CDC42BPA-213ENST00000488131 KRTAP10-6P60371 365 aaPredicted RBP3.24□□□□□ -1.89
CDC42BPA-213ENST00000488131 DEFB114Q30KQ6 69 aa3.24□□□□□ -1.89
CDC42BPA-213ENST00000488131 DEFB109BQ30KR1 87 aa3.24□□□□□ -1.89
CDC42BPA-213ENST00000488131 ZNF843Q8N446 348 aa3.24□□□□□ -1.89
CDC42BPA-213ENST00000488131 MUC7Q8TAX7 377 aa3.24□□□□□ -1.89
CDC42BPA-213ENST00000488131 CNOT1A5YKK6 2376 aaKnown RBP3.23□□□□□ -1.89
CDC42BPA-213ENST00000488131 LYRM9A8MSI8 78 aa3.23□□□□□ -1.89
CDC42BPA-213ENST00000488131 RETNQ9HD89 108 aa3.23□□□□□ -1.89
CDC42BPA-213ENST00000488131 ESM1Q9NQ30 184 aa3.23□□□□□ -1.89
CDC42BPA-213ENST00000488131 ZFHX3Q15911 3703 aa3.23□□□□□ -1.89
CDC42BPA-213ENST00000488131 CSMD1Q96PZ7 3565 aa3.23□□□□□ -1.89
CDC42BPA-213ENST00000488131 GPR179Q6PRD1 2367 aa3.22□□□□□ -1.89
CDC42BPA-213ENST00000488131 IGLV5-52A0A0A0MRZ9 124 aa3.22□□□□□ -1.89
CDC42BPA-213ENST00000488131 IGKV4-1P06312 121 aa3.22□□□□□ -1.89
CDC42BPA-213ENST00000488131 PLA2G2AP14555 144 aa3.22□□□□□ -1.89
CDC42BPA-213ENST00000488131 FBXL19-AS1Q494R0 122 aa3.22□□□□□ -1.89
CDC42BPA-213ENST00000488131 CD164L2Q6UWJ8 174 aa3.22□□□□□ -1.89
CDC42BPA-213ENST00000488131 MRPL55Q7Z7F7 128 aaKnown RBP3.22□□□□□ -1.89
CDC42BPA-213ENST00000488131 KTN1-AS1Q86SY8 53 aa3.22□□□□□ -1.89
CDC42BPA-213ENST00000488131 CYP4F30PQ9H0H9 118 aa3.22□□□□□ -1.89
CDC42BPA-213ENST00000488131 TOMM7Q9P0U1 55 aa3.22□□□□□ -1.89
CDC42BPA-213ENST00000488131 SPTBN1Q01082 2364 aaKnown RBP3.22□□□□□ -1.89
CDC42BPA-213ENST00000488131 MAP1BP46821 2468 aaKnown RBP3.22□□□□□ -1.89
CDC42BPA-213ENST00000488131 PCNX1Q96RV3 2341 aa3.22□□□□□ -1.89
CDC42BPA-213ENST00000488131 SEC61BP60468 96 aaKnown RBP3.22□□□□□ -1.89
CDC42BPA-213ENST00000488131 COX17Q14061 63 aa3.22□□□□□ -1.89
CDC42BPA-213ENST00000488131 C6orf99Q4VX62 202 aa3.22□□□□□ -1.89
CDC42BPA-213ENST00000488131 Q8IZM0 81 aa3.22□□□□□ -1.89
CDC42BPA-213ENST00000488131 SPATA3Q8NHX4 192 aa3.22□□□□□ -1.89
CDC42BPA-213ENST00000488131 ZCCHC13Q8WW36 166 aaKnown RBP3.22□□□□□ -1.89
CDC42BPA-213ENST00000488131 ARRDC1-AS1Q9H2J1 176 aa3.22□□□□□ -1.89
CDC42BPA-213ENST00000488131 ANKHD1Q8IWZ3 2542 aaKnown RBP3.21□□□□□ -1.9
CDC42BPA-213ENST00000488131 LOC400499M0QZD8 3231 aa3.21□□□□□ -1.9
CDC42BPA-213ENST00000488131 IGHV4-30-2A0A087WSY4 118 aa3.21□□□□□ -1.9
CDC42BPA-213ENST00000488131 TRAV22A0A0B4J277 110 aa3.21□□□□□ -1.9
CDC42BPA-213ENST00000488131 A6NDX4 124 aa3.21□□□□□ -1.9
CDC42BPA-213ENST00000488131 UBE2L6O14933 153 aa3.21□□□□□ -1.9
CDC42BPA-213ENST00000488131 IGHV4-30-4P0DP06 118 aa3.21□□□□□ -1.9
CDC42BPA-213ENST00000488131 UBE2BP63146 152 aa3.21□□□□□ -1.9
CDC42BPA-213ENST00000488131 LPAL2Q16609 132 aa3.21□□□□□ -1.9
CDC42BPA-213ENST00000488131 C1orf64Q8NEQ6 169 aa3.21□□□□□ -1.9
CDC42BPA-213ENST00000488131 LINC00588Q9Y4M8 146 aa3.21□□□□□ -1.9
CDC42BPA-213ENST00000488131 APC2O95996 2303 aa3.2□□□□□ -1.9
CDC42BPA-213ENST00000488131 INSP01308 110 aa3.2□□□□□ -1.9
CDC42BPA-213ENST00000488131 Q75L30 129 aa3.2□□□□□ -1.9
CDC42BPA-213ENST00000488131 HTN1P15515 57 aa3.2□□□□□ -1.9
CDC42BPA-213ENST00000488131 COX7BP24311 80 aa3.2□□□□□ -1.9
CDC42BPA-213ENST00000488131 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.2□□□□□ -1.9
CDC42BPA-213ENST00000488131 SCXQ7RTU7 201 aa3.2□□□□□ -1.9
CDC42BPA-213ENST00000488131 STHQ8IWL8 128 aa3.2□□□□□ -1.9
CDC42BPA-213ENST00000488131 HIGD2AQ9BW72 106 aa3.2□□□□□ -1.9
CDC42BPA-213ENST00000488131 RBM12B-AS1Q9P1G2 102 aa3.2□□□□□ -1.9
CDC42BPA-213ENST00000488131 ZDBF2Q9HCK1 2354 aa3.19□□□□□ -1.9
CDC42BPA-213ENST00000488131 ADGRG4Q8IZF6 3080 aa3.19□□□□□ -1.9
CDC42BPA-213ENST00000488131 PSCAO43653 123 aa3.19□□□□□ -1.9
CDC42BPA-213ENST00000488131 IGLV6-57P01721 117 aa3.19□□□□□ -1.9
CDC42BPA-213ENST00000488131 PRM2P04554 102 aa3.19□□□□□ -1.9
CDC42BPA-213ENST00000488131 SYCNQ0VAF6 134 aa3.19□□□□□ -1.9
CDC42BPA-213ENST00000488131 Q6ZQY7 126 aa3.19□□□□□ -1.9
CDC42BPA-213ENST00000488131 CELA1Q9UNI1 258 aa3.19□□□□□ -1.9
CDC42BPA-213ENST00000488131 CACNA1HO95180 2353 aa3.19□□□□□ -1.9
CDC42BPA-213ENST00000488131 IGLV4-60A0A075B6I1 120 aa3.18□□□□□ -1.9
CDC42BPA-213ENST00000488131 LINC00959A0A1B0GUT2 108 aa3.18□□□□□ -1.9
CDC42BPA-213ENST00000488131 C19orf84I3L1E1 186 aa3.18□□□□□ -1.9
CDC42BPA-213ENST00000488131 CCL24O00175 119 aa3.18□□□□□ -1.9
CDC42BPA-213ENST00000488131 NDUFS5O43920 106 aa3.18□□□□□ -1.9
CDC42BPA-213ENST00000488131 DEFB131AP59861 70 aa3.18□□□□□ -1.9
CDC42BPA-213ENST00000488131 Q5VV11 94 aa3.18□□□□□ -1.9
CDC42BPA-213ENST00000488131 PHF5AQ7RTV0 110 aaKnown RBP3.18□□□□□ -1.9
CDC42BPA-213ENST00000488131 DCHS2Q6V1P9 2916 aa3.18□□□□□ -1.9
CDC42BPA-213ENST00000488131 TRBV6-8A0A0A6YYG3 113 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms