RNA–Protein interactions for RNA: ENST00000485567.1

FN1-222, Transcript of fibronectin 1, humanhuman

TSL 1 (best)

Gene FN1, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-222ENST00000485567 ABCA9Q8IUA7 1624 aa1.58□□□□□ -2.16
FN1-222ENST00000485567 ATP7BP35670 1465 aa1.57□□□□□ -2.16
FN1-222ENST00000485567 RALGAPBQ86X10 1494 aa1.57□□□□□ -2.16
FN1-222ENST00000485567 LOC285556D6RIA3 1793 aa1.57□□□□□ -2.16
FN1-222ENST00000485567 TIAM1Q13009 1591 aa1.57□□□□□ -2.16
FN1-222ENST00000485567 DNAJC13O75165 2243 aa1.57□□□□□ -2.16
FN1-222ENST00000485567 A0A1B0GUT8 65 aa1.57□□□□□ -2.16
FN1-222ENST00000485567 H0Y9P7 68 aa1.57□□□□□ -2.16
FN1-222ENST00000485567 SMIM4Q8WVI0 70 aa1.57□□□□□ -2.16
FN1-222ENST00000485567 COL4A1P02462 1669 aa1.57□□□□□ -2.16
FN1-222ENST00000485567 KIF1AQ12756 1690 aa1.57□□□□□ -2.16
FN1-222ENST00000485567 SIPA1L3O60292 1781 aaPredicted RBP1.57□□□□□ -2.16
FN1-222ENST00000485567 URB2Q14146 1524 aaKnown RBP1.56□□□□□ -2.16
FN1-222ENST00000485567 DIP2AQ14689 1571 aa1.56□□□□□ -2.16
FN1-222ENST00000485567 NHSL1Q5SYE7 1610 aa1.56□□□□□ -2.16
FN1-222ENST00000485567 CCDC180Q9P1Z9 1646 aa1.56□□□□□ -2.16
FN1-222ENST00000485567 COX17Q14061 63 aa1.56□□□□□ -2.16
FN1-222ENST00000485567 C10orf113Q5VZT2 155 aa1.56□□□□□ -2.16
FN1-222ENST00000485567 FAM103A1Q9BTL3 118 aaKnown RBP1.56□□□□□ -2.16
FN1-222ENST00000485567 NKTRP30414 1462 aaKnown RBP1.56□□□□□ -2.16
FN1-222ENST00000485567 LRP6O75581 1613 aa1.55□□□□□ -2.16
FN1-222ENST00000485567 ATXN8Q156A1 80 aa1.55□□□□□ -2.16
FN1-222ENST00000485567 TMEM263Q8WUH6 116 aaKnown RBP1.55□□□□□ -2.16
FN1-222ENST00000485567 IFT172Q9UG01 1749 aa1.54□□□□□ -2.16
FN1-222ENST00000485567 TRAV21A0A0B4J279 112 aa1.54□□□□□ -2.16
FN1-222ENST00000485567 UNQ6190/PRO20217Q6UXQ8 127 aa1.54□□□□□ -2.16
FN1-222ENST00000485567 PIK3C2BO00750 1634 aa1.54□□□□□ -2.16
FN1-222ENST00000485567 ZNF831Q5JPB2 1677 aa1.54□□□□□ -2.16
FN1-222ENST00000485567 MED13LQ71F56 2210 aa1.54□□□□□ -2.16
FN1-222ENST00000485567 TRBV30A0A0K0K1B3 111 aa1.53□□□□□ -2.16
FN1-222ENST00000485567 G3V318 75 aa1.53□□□□□ -2.16
FN1-222ENST00000485567 GLI2P10070 1586 aa1.53□□□□□ -2.16
FN1-222ENST00000485567 SHPRHQ149N8 1683 aa1.53□□□□□ -2.16
FN1-222ENST00000485567 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.53□□□□□ -2.16
FN1-222ENST00000485567 Q6ZRX8 168 aa1.53□□□□□ -2.16
FN1-222ENST00000485567 ALKQ9UM73 1620 aa1.53□□□□□ -2.16
FN1-222ENST00000485567 XRN1Q8IZH2 1706 aaKnown RBP1.52□□□□□ -2.17
FN1-222ENST00000485567 PAPPAQ13219 1627 aa1.52□□□□□ -2.17
FN1-222ENST00000485567 USP32Q8NFA0 1604 aa1.52□□□□□ -2.17
FN1-222ENST00000485567 A0A096LNT2 108 aa1.52□□□□□ -2.17
FN1-222ENST00000485567 GVQW2A0A096LPI5 108 aaPredicted RBP1.52□□□□□ -2.17
FN1-222ENST00000485567 LY6G6CO95867 125 aa1.52□□□□□ -2.17
FN1-222ENST00000485567 KRTAP5-7Q6L8G8 165 aa1.52□□□□□ -2.17
FN1-222ENST00000485567 C10orf99Q6UWK7 81 aa1.52□□□□□ -2.17
FN1-222ENST00000485567 PLAC4Q8WY50 150 aa1.52□□□□□ -2.17
FN1-222ENST00000485567 ABCA1O95477 2261 aa1.52□□□□□ -2.17
FN1-222ENST00000485567 ABCA6Q8N139 1617 aa1.51□□□□□ -2.17
FN1-222ENST00000485567 CLASP1Q7Z460 1538 aa1.51□□□□□ -2.17
FN1-222ENST00000485567 INTS1Q8N201 2190 aaKnown RBP1.51□□□□□ -2.17
FN1-222ENST00000485567 NCOA6Q14686 2063 aaPredicted RBP1.51□□□□□ -2.17
FN1-222ENST00000485567 LINC00959A0A1B0GUT2 108 aa1.51□□□□□ -2.17
FN1-222ENST00000485567 LINC01549A6NIU2 74 aa1.51□□□□□ -2.17
FN1-222ENST00000485567 NREPQ16612 68 aa1.51□□□□□ -2.17
FN1-222ENST00000485567 WFDC9Q8NEX5 89 aa1.51□□□□□ -2.17
FN1-222ENST00000485567 FBN1P35555 2871 aaKnown RBP1.51□□□□□ -2.17
FN1-222ENST00000485567 NUP188Q5SRE5 1749 aa1.51□□□□□ -2.17
FN1-222ENST00000485567 CRYBG1Q9Y4K1 1723 aa1.51□□□□□ -2.17
FN1-222ENST00000485567 E9PCH4 1651 aa1.51□□□□□ -2.17
FN1-222ENST00000485567 ZFHX3Q15911 3703 aa1.51□□□□□ -2.17
FN1-222ENST00000485567 SAMD9Q5K651 1589 aa1.51□□□□□ -2.17
FN1-222ENST00000485567 MAP2P11137 1827 aaKnown RBP1.5□□□□□ -2.17
FN1-222ENST00000485567 NCR3O14931 201 aa1.5□□□□□ -2.17
FN1-222ENST00000485567 PRB1P04280 392 aa1.5□□□□□ -2.17
FN1-222ENST00000485567 DEFB112Q30KQ8 113 aa1.5□□□□□ -2.17
FN1-222ENST00000485567 KRTAP21-3Q3LHN1 58 aa1.5□□□□□ -2.17
FN1-222ENST00000485567 SMIM11BQ8TCY0 68 aa1.5□□□□□ -2.17
FN1-222ENST00000485567 FXYD6Q9H0Q3 95 aa1.5□□□□□ -2.17
FN1-222ENST00000485567 ITSN2Q9NZM3 1697 aa1.5□□□□□ -2.17
FN1-222ENST00000485567 NESP48681 1621 aa1.5□□□□□ -2.17
FN1-222ENST00000485567 RNF17Q9BXT8 1623 aaKnown RBP1.5□□□□□ -2.17
FN1-222ENST00000485567 PREX1Q8TCU6 1659 aa1.49□□□□□ -2.17
FN1-222ENST00000485567 A0A1B0GU69 56 aa1.49□□□□□ -2.17
FN1-222ENST00000485567 NDUFB1O75438 58 aa1.49□□□□□ -2.17
FN1-222ENST00000485567 HAMPP81172 84 aa1.49□□□□□ -2.17
FN1-222ENST00000485567 GAFA1Q96PS6 74 aa1.49□□□□□ -2.17
FN1-222ENST00000485567 SSC5DA1L4H1 1573 aa1.49□□□□□ -2.17
FN1-222ENST00000485567 C5P01031 1676 aa1.48□□□□□ -2.17
FN1-222ENST00000485567 MYO7AQ13402 2215 aa1.48□□□□□ -2.17
FN1-222ENST00000485567 TRBV6-1A0A0K0K1D8 114 aa1.48□□□□□ -2.17
FN1-222ENST00000485567 LCE6AA0A183 80 aa1.48□□□□□ -2.17
FN1-222ENST00000485567 LRRC7Q96NW7 1537 aa1.48□□□□□ -2.17
FN1-222ENST00000485567 FANCD2Q9BXW9 1451 aa1.48□□□□□ -2.17
FN1-222ENST00000485567 ANKRD50Q9ULJ7 1429 aa1.48□□□□□ -2.17
FN1-222ENST00000485567 F5P12259 2224 aa1.47□□□□□ -2.17
FN1-222ENST00000485567 SSBP3-AS1Q7Z2R9 100 aa1.47□□□□□ -2.17
FN1-222ENST00000485567 DEFB119Q8N690 84 aa1.47□□□□□ -2.17
FN1-222ENST00000485567 WIZO95785 1651 aa1.47□□□□□ -2.17
FN1-222ENST00000485567 ANKRD36A6QL64 1941 aa1.46□□□□□ -2.18
FN1-222ENST00000485567 PKD1L3Q7Z443 1732 aa1.46□□□□□ -2.18
FN1-222ENST00000485567 MROH2AA6NES4 1674 aa1.46□□□□□ -2.18
FN1-222ENST00000485567 ALS2Q96Q42 1657 aa1.46□□□□□ -2.18
FN1-222ENST00000485567 RPL37P61927 97 aaKnown RBP1.46□□□□□ -2.18
FN1-222ENST00000485567 ENHOQ6UWT2 76 aa1.46□□□□□ -2.18
FN1-222ENST00000485567 LINC00575Q6W349 94 aa1.46□□□□□ -2.18
FN1-222ENST00000485567 FMN2Q9NZ56 1722 aa1.46□□□□□ -2.18
FN1-222ENST00000485567 UBR3Q6ZT12 1888 aa1.46□□□□□ -2.18
FN1-222ENST00000485567 SLIT1O75093 1534 aa1.45□□□□□ -2.18
FN1-222ENST00000485567 PLCH1Q4KWH8 1693 aa1.45□□□□□ -2.18
FN1-222ENST00000485567 NHSQ6T4R5 1651 aa1.45□□□□□ -2.18
FN1-222ENST00000485567 PAPPA2Q9BXP8 1791 aa1.45□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms