RNA–Protein interactions for RNA: ENST00000484855.2

CTSA-207, Transcript of cathepsin A, humanhuman

TSL 1 (best)

Gene CTSA, Length 2,183 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-207ENST00000484855 A0A0B4J2C4 111 aa11.31□□□□□ -0.6
CTSA-207ENST00000484855 COL7A1Q02388 2944 aa11.31□□□□□ -0.6
CTSA-207ENST00000484855 GAGE10A6NGK3 116 aa11.31□□□□□ -0.6
CTSA-207ENST00000484855 PRO1854Q9UHT4 67 aa11.31□□□□□ -0.6
CTSA-207ENST00000484855 EIF4EBP3O60516 100 aaPredicted RBP11.3□□□□□ -0.6
CTSA-207ENST00000484855 TSPAN13O95857 204 aa11.3□□□□□ -0.6
CTSA-207ENST00000484855 GTF2H5Q6ZYL4 71 aa11.3□□□□□ -0.6
CTSA-207ENST00000484855 LINC00308Q8TCZ7 52 aa11.3□□□□□ -0.6
CTSA-207ENST00000484855 SPCS1Q9Y6A9 102 aa11.3□□□□□ -0.6
CTSA-207ENST00000484855 TRAV8-4A0A0B4J246 113 aa11.3□□□□□ -0.6
CTSA-207ENST00000484855 K7EP34 96 aa11.3□□□□□ -0.6
CTSA-207ENST00000484855 LINC01556Q5JQF7 62 aa11.3□□□□□ -0.6
CTSA-207ENST00000484855 COPS9Q8WXC6 57 aa11.3□□□□□ -0.6
CTSA-207ENST00000484855 CFAP161Q6P656 301 aa11.28□□□□□ -0.6
CTSA-207ENST00000484855 IBA57-AS1B1ANH7 110 aa11.27□□□□□ -0.6
CTSA-207ENST00000484855 CKS1BP61024 79 aa11.27□□□□□ -0.6
CTSA-207ENST00000484855 LINC00158P58513 81 aa11.27□□□□□ -0.61
CTSA-207ENST00000484855 KIAA0087Q14695 138 aa11.27□□□□□ -0.61
CTSA-207ENST00000484855 C2orf82Q6UX34 121 aa11.27□□□□□ -0.61
CTSA-207ENST00000484855 CXCL5P42830 114 aa11.26□□□□□ -0.61
CTSA-207ENST00000484855 SOSTDC1Q6X4U4 206 aa11.26□□□□□ -0.61
CTSA-207ENST00000484855 MIR7-3HGQ8N6C7 128 aa11.26□□□□□ -0.61
CTSA-207ENST00000484855 LINC00588Q9Y4M8 146 aa11.26□□□□□ -0.61
CTSA-207ENST00000484855 DNHD1Q96M86 4753 aa11.26□□□□□ -0.61
CTSA-207ENST00000484855 ERG28Q9UKR5 140 aa11.26□□□□□ -0.61
CTSA-207ENST00000484855 DNAH10OSP0CZ25 163 aa11.25□□□□□ -0.61
CTSA-207ENST00000484855 CCL18P55774 89 aa11.25□□□□□ -0.61
CTSA-207ENST00000484855 KLK5Q9Y337 293 aaPredicted RBP11.25□□□□□ -0.61
CTSA-207ENST00000484855 PFN2P35080 140 aa11.24□□□□□ -0.61
CTSA-207ENST00000484855 H7C2G1 150 aa11.24□□□□□ -0.61
CTSA-207ENST00000484855 SPAG11BQ08648 103 aa11.24□□□□□ -0.61
CTSA-207ENST00000484855 LOC107984156A0A0G2JMH3 177 aa11.23□□□□□ -0.61
CTSA-207ENST00000484855 ARL17AQ8IVW1 177 aa11.23□□□□□ -0.61
CTSA-207ENST00000484855 PPDPFQ9H3Y8 114 aa11.23□□□□□ -0.61
CTSA-207ENST00000484855 Q1RN00 199 aa11.23□□□□□ -0.61
CTSA-207ENST00000484855 STAB2Q8WWQ8 2551 aa11.22□□□□□ -0.61
CTSA-207ENST00000484855 DYNC2H1Q8NCM8 4307 aaKnown RBP11.22□□□□□ -0.61
CTSA-207ENST00000484855 NHLRC4P0CG21 123 aaPredicted RBP11.22□□□□□ -0.61
CTSA-207ENST00000484855 LYRM7Q5U5X0 104 aa11.21□□□□□ -0.61
CTSA-207ENST00000484855 C1orf43Q9BWL3 253 aa11.21□□□□□ -0.61
CTSA-207ENST00000484855 KRTAP26-1Q6PEX3 210 aa11.21□□□□□ -0.62
CTSA-207ENST00000484855 PSMB2P49721 201 aa11.2□□□□□ -0.62
CTSA-207ENST00000484855 RPL13AP40429 203 aaKnown RBP11.19□□□□□ -0.62
CTSA-207ENST00000484855 C6orf223Q8N319 242 aa11.19□□□□□ -0.62
CTSA-207ENST00000484855 PRKDCP78527 4128 aaKnown RBP11.19□□□□□ -0.62
CTSA-207ENST00000484855 IGKV2D-24A0A075B6R9 120 aa11.18□□□□□ -0.62
CTSA-207ENST00000484855 LINC00526Q96FQ7 95 aa11.18□□□□□ -0.62
CTSA-207ENST00000484855 DNAH1Q9P2D7 4330 aa11.18□□□□□ -0.62
CTSA-207ENST00000484855 UPK3BQ9BT76 320 aa11.18□□□□□ -0.62
CTSA-207ENST00000484855 Q9HAA7 133 aa11.18□□□□□ -0.62
CTSA-207ENST00000484855 SCGB1C2P0DMR2 95 aa11.17□□□□□ -0.62
CTSA-207ENST00000484855 COX17Q14061 63 aa11.17□□□□□ -0.62
CTSA-207ENST00000484855 SND1-IT1Q9HBX3 110 aa11.17□□□□□ -0.62
CTSA-207ENST00000484855 H3BMG7 143 aa11.16□□□□□ -0.62
CTSA-207ENST00000484855 UNQ6190/PRO20217Q6UXQ8 127 aa11.16□□□□□ -0.62
CTSA-207ENST00000484855 C9orf116Q5BN46 136 aaPredicted RBP11.16□□□□□ -0.62
CTSA-207ENST00000484855 C10orf25Q5T742 122 aa11.15□□□□□ -0.62
CTSA-207ENST00000484855 TRIAP1O43715 76 aa11.14□□□□□ -0.63
CTSA-207ENST00000484855 HIGD2BQ4VC39 106 aa11.14□□□□□ -0.63
CTSA-207ENST00000484855 NTN5Q8WTR8 489 aaPredicted RBP11.14□□□□□ -0.63
CTSA-207ENST00000484855 TRBV30A0A0K0K1B3 111 aa11.14□□□□□ -0.63
CTSA-207ENST00000484855 ZNF561-AS1K7EIQ3 104 aa11.14□□□□□ -0.63
CTSA-207ENST00000484855 KRTAP21-3Q3LHN1 58 aa11.13□□□□□ -0.63
CTSA-207ENST00000484855 C15orf56Q8N910 161 aa11.13□□□□□ -0.63
CTSA-207ENST00000484855 APLNQ9ULZ1 77 aa11.13□□□□□ -0.63
CTSA-207ENST00000484855 TRBV20-1A0A075B6N2 111 aa11.13□□□□□ -0.63
CTSA-207ENST00000484855 TCL1BO95988 128 aa11.13□□□□□ -0.63
CTSA-207ENST00000484855 TRAV13-2A0A0B4J235 113 aa11.12□□□□□ -0.63
CTSA-207ENST00000484855 LYSTQ99698 3801 aa11.12□□□□□ -0.63
CTSA-207ENST00000484855 DNAH7Q8WXX0 4024 aa11.11□□□□□ -0.63
CTSA-207ENST00000484855 IGKV2-28A0A075B6P5 120 aa11.11□□□□□ -0.63
CTSA-207ENST00000484855 GVQW2A0A096LPI5 108 aaPredicted RBP11.11□□□□□ -0.63
CTSA-207ENST00000484855 IGKV2D-28P01615 120 aa11.11□□□□□ -0.63
CTSA-207ENST00000484855 UBE2DNLQ8IWF7 75 aa11.11□□□□□ -0.63
CTSA-207ENST00000484855 CSMD3Q7Z407 3707 aa11.1□□□□□ -0.63
CTSA-207ENST00000484855 NUPR2A6NF83 97 aa11.1□□□□□ -0.63
CTSA-207ENST00000484855 CAMK2N2Q96S95 79 aa11.1□□□□□ -0.63
CTSA-207ENST00000484855 COX6CP09669 75 aa11.1□□□□□ -0.63
CTSA-207ENST00000484855 LINC00337Q8N6G1 96 aa11.1□□□□□ -0.63
CTSA-207ENST00000484855 C6orf48Q9UBA6 75 aa11.1□□□□□ -0.63
CTSA-207ENST00000484855 MEGF8Q7Z7M0 2845 aa11.1□□□□□ -0.63
CTSA-207ENST00000484855 MUC7Q8TAX7 377 aa11.09□□□□□ -0.63
CTSA-207ENST00000484855 RMI2Q96E14 147 aa11.09□□□□□ -0.63
CTSA-207ENST00000484855 PLECQ15149 4684 aaKnown RBP11.09□□□□□ -0.63
CTSA-207ENST00000484855 MTURNQ8N3F0 131 aa11.09□□□□□ -0.63
CTSA-207ENST00000484855 F8W1H4 67 aa11.08□□□□□ -0.64
CTSA-207ENST00000484855 C2orf48Q96LS8 159 aa11.08□□□□□ -0.64
CTSA-207ENST00000484855 ATXN8Q156A1 80 aa11.06□□□□□ -0.64
CTSA-207ENST00000484855 PRO0461Q9UI25 63 aa11.06□□□□□ -0.64
CTSA-207ENST00000484855 NDUFC2O95298 119 aa11.05□□□□□ -0.64
CTSA-207ENST00000484855 Q6ZRU5 148 aa11.05□□□□□ -0.64
CTSA-207ENST00000484855 F8WDY8 70 aa11.04□□□□□ -0.64
CTSA-207ENST00000484855 WFDC2Q14508 124 aa11.04□□□□□ -0.64
CTSA-207ENST00000484855 CASC10Q5T4H9 136 aa11.03□□□□□ -0.64
CTSA-207ENST00000484855 OR13C6PQ8NH95 151 aa11.03□□□□□ -0.64
CTSA-207ENST00000484855 CLEC2BQ92478 149 aa11.03□□□□□ -0.64
CTSA-207ENST00000484855 KRTAP1-5Q9BYS1 174 aa11.02□□□□□ -0.65
CTSA-207ENST00000484855 USP17L23D6RBM5 183 aa11.01□□□□□ -0.65
CTSA-207ENST00000484855 RPL28P46779 137 aaKnown RBP11.01□□□□□ -0.65
CTSA-207ENST00000484855 STARD9Q9P2P6 4700 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 456.5 ms