RNA–Protein interactions for RNA: ENST00000481131.5

UPF3A-207, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 678 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-207ENST00000481131 LGALS9CQ6DKI2 356 aa2.44□□□□□ -2.02
UPF3A-207ENST00000481131 COMMD7Q86VX2 200 aa2.44□□□□□ -2.02
UPF3A-207ENST00000481131 UBE2DNLQ8IWF7 75 aa2.44□□□□□ -2.02
UPF3A-207ENST00000481131 FER1L6-AS1Q8NA97 138 aa2.44□□□□□ -2.02
UPF3A-207ENST00000481131 C15orf53Q8NAA6 179 aa2.44□□□□□ -2.02
UPF3A-207ENST00000481131 SMIM12Q96EX1 92 aa2.44□□□□□ -2.02
UPF3A-207ENST00000481131 SFRP2Q96HF1 295 aa2.44□□□□□ -2.02
UPF3A-207ENST00000481131 NAT8Q9UHE5 227 aa2.44□□□□□ -2.02
UPF3A-207ENST00000481131 PRO0255Q9UI72 69 aa2.44□□□□□ -2.02
UPF3A-207ENST00000481131 HHLA3Q9XRX5 114 aa2.44□□□□□ -2.02
UPF3A-207ENST00000481131 CARHSP1Q9Y2V2 147 aaKnown RBP2.44□□□□□ -2.02
UPF3A-207ENST00000481131 LINC00588Q9Y4M8 146 aa2.44□□□□□ -2.02
UPF3A-207ENST00000481131 V9GYV3 84 aa2.44□□□□□ -2.02
UPF3A-207ENST00000481131 TRAV26-2A0A0B4J265 109 aa2.43□□□□□ -2.02
UPF3A-207ENST00000481131 A0A1B0GU33 70 aa2.43□□□□□ -2.02
UPF3A-207ENST00000481131 A8MWV9 139 aa2.43□□□□□ -2.02
UPF3A-207ENST00000481131 MGPP08493 103 aa2.43□□□□□ -2.02
UPF3A-207ENST00000481131 LINC00694P0DN24 101 aa2.43□□□□□ -2.02
UPF3A-207ENST00000481131 EVI2AP22794 236 aa2.43□□□□□ -2.02
UPF3A-207ENST00000481131 TCTAP57738 103 aa2.43□□□□□ -2.02
UPF3A-207ENST00000481131 RPS20P60866 119 aaKnown RBP2.43□□□□□ -2.02
UPF3A-207ENST00000481131 ZNF56Q15929 161 aa2.43□□□□□ -2.02
UPF3A-207ENST00000481131 SPANXN1Q5VSR9 72 aa2.43□□□□□ -2.02
UPF3A-207ENST00000481131 WFDC10BQ8IUB3 73 aa2.43□□□□□ -2.02
UPF3A-207ENST00000481131 BOD1L2Q8IYS8 172 aa2.43□□□□□ -2.02
UPF3A-207ENST00000481131 ZNRF2Q8NHG8 242 aa2.43□□□□□ -2.02
UPF3A-207ENST00000481131 DEFB104AQ8WTQ1 72 aa2.43□□□□□ -2.02
UPF3A-207ENST00000481131 PTH2Q96A98 100 aa2.43□□□□□ -2.02
UPF3A-207ENST00000481131 OSTCQ9NRP0 149 aa2.43□□□□□ -2.02
UPF3A-207ENST00000481131 LY96Q9Y6Y9 160 aa2.43□□□□□ -2.02
UPF3A-207ENST00000481131 DNAH10Q8IVF4 4471 aa2.42□□□□□ -2.02
UPF3A-207ENST00000481131 TRBV6-4A0A1B0GX49 114 aa2.42□□□□□ -2.02
UPF3A-207ENST00000481131 LINC00862A6NCI5 91 aa2.42□□□□□ -2.02
UPF3A-207ENST00000481131 HIGD1CA8MV81 97 aa2.42□□□□□ -2.02
UPF3A-207ENST00000481131 H3BNG1 76 aa2.42□□□□□ -2.02
UPF3A-207ENST00000481131 SRIP30626 198 aa2.42□□□□□ -2.02
UPF3A-207ENST00000481131 RHOHQ15669 191 aa2.42□□□□□ -2.02
UPF3A-207ENST00000481131 LYPD5Q6UWN5 251 aa2.42□□□□□ -2.02
UPF3A-207ENST00000481131 NUP35Q8NFH5 326 aa2.42□□□□□ -2.02
UPF3A-207ENST00000481131 TSKUQ8WUA8 353 aa2.42□□□□□ -2.02
UPF3A-207ENST00000481131 AP1S3Q96PC3 154 aa2.42□□□□□ -2.02
UPF3A-207ENST00000481131 BIN3Q9NQY0 253 aa2.42□□□□□ -2.02
UPF3A-207ENST00000481131 MRPS16Q9Y3D3 137 aaKnown RBP2.42□□□□□ -2.02
UPF3A-207ENST00000481131 DNAH2Q9P225 4427 aa2.41□□□□□ -2.02
UPF3A-207ENST00000481131 HECTD4Q9Y4D8 3996 aa2.41□□□□□ -2.02
UPF3A-207ENST00000481131 SMIM27A0A1W2PRY6 76 aa2.41□□□□□ -2.02
UPF3A-207ENST00000481131 TMEM218A2RU14 115 aa2.41□□□□□ -2.02
UPF3A-207ENST00000481131 F2Z2F3 143 aa2.41□□□□□ -2.02
UPF3A-207ENST00000481131 F8W036 122 aa2.41□□□□□ -2.02
UPF3A-207ENST00000481131 NCR2O95944 276 aa2.41□□□□□ -2.02
UPF3A-207ENST00000481131 CCL18P55774 89 aa2.41□□□□□ -2.02
UPF3A-207ENST00000481131 RAB4BP61018 213 aa2.41□□□□□ -2.02
UPF3A-207ENST00000481131 UBE2D3P61077 147 aa2.41□□□□□ -2.02
UPF3A-207ENST00000481131 UBE2D2P62837 147 aa2.41□□□□□ -2.02
UPF3A-207ENST00000481131 MRPL54Q6P161 138 aaKnown RBP2.41□□□□□ -2.02
UPF3A-207ENST00000481131 ATP6V0E2Q8NHE4 81 aa2.41□□□□□ -2.02
UPF3A-207ENST00000481131 RPL39LQ96EH5 51 aaKnown RBP2.41□□□□□ -2.02
UPF3A-207ENST00000481131 PRADC1Q9BSG0 188 aa2.41□□□□□ -2.02
UPF3A-207ENST00000481131 CNFNQ9BYD5 112 aa2.41□□□□□ -2.02
UPF3A-207ENST00000481131 DPH3P1Q9H4G8 78 aa2.41□□□□□ -2.02
UPF3A-207ENST00000481131 SMDT1Q9H4I9 107 aa2.41□□□□□ -2.02
UPF3A-207ENST00000481131 FAT2Q9NYQ8 4349 aa2.41□□□□□ -2.02
UPF3A-207ENST00000481131 DNAH17Q9UFH2 4485 aa2.4□□□□□ -2.02
UPF3A-207ENST00000481131 IGLV10-54A0A075B6I4 117 aa2.4□□□□□ -2.03
UPF3A-207ENST00000481131 NBDYA0A0U1RRE5 68 aa2.4□□□□□ -2.03
UPF3A-207ENST00000481131 A0A1B0GUT8 65 aa2.4□□□□□ -2.03
UPF3A-207ENST00000481131 M0QY20 66 aa2.4□□□□□ -2.03
UPF3A-207ENST00000481131 LECT2O14960 151 aa2.4□□□□□ -2.03
UPF3A-207ENST00000481131 IGHV3-30P01768 117 aa2.4□□□□□ -2.03
UPF3A-207ENST00000481131 IGHV3-33P01772 117 aa2.4□□□□□ -2.03
UPF3A-207ENST00000481131 TRGC1P0CF51 173 aa2.4□□□□□ -2.03
UPF3A-207ENST00000481131 SMIM17P0DL12 118 aa2.4□□□□□ -2.03
UPF3A-207ENST00000481131 IGHV3-30-3P0DP02 117 aa2.4□□□□□ -2.03
UPF3A-207ENST00000481131 IGHV3-30-5P0DP03 117 aa2.4□□□□□ -2.03
UPF3A-207ENST00000481131 DNAJC30Q96LL9 226 aa2.4□□□□□ -2.03
UPF3A-207ENST00000481131 UPK3BQ9BT76 320 aa2.4□□□□□ -2.03
UPF3A-207ENST00000481131 GTSF1LQ9H1H1 148 aa2.4□□□□□ -2.03
UPF3A-207ENST00000481131 NAT8BQ9UHF3 227 aa2.4□□□□□ -2.03
UPF3A-207ENST00000481131 EPPK1P58107 5090 aaKnown RBP2.4□□□□□ -2.03
UPF3A-207ENST00000481131 PKD1P98161 4303 aa2.39□□□□□ -2.03
UPF3A-207ENST00000481131 PKHD1P08F94 4074 aa2.39□□□□□ -2.03
UPF3A-207ENST00000481131 TRBV7-3A0A075B6L6 115 aa2.39□□□□□ -2.03
UPF3A-207ENST00000481131 TRBV24-1A0A075B6N3 115 aa2.39□□□□□ -2.03
UPF3A-207ENST00000481131 TRBV10-1A0A0K0K1A3 114 aa2.39□□□□□ -2.03
UPF3A-207ENST00000481131 FUSP35637 526 aaKnown RBP eCLIP2.39□□□□□ -2.03
UPF3A-207ENST00000481131 MRPL51Q4U2R6 128 aaKnown RBP2.39□□□□□ -2.03
UPF3A-207ENST00000481131 C10orf91Q5T1B1 145 aa2.39□□□□□ -2.03
UPF3A-207ENST00000481131 LELP1Q5T871 98 aa2.39□□□□□ -2.03
UPF3A-207ENST00000481131 RASL11AQ6T310 242 aa2.39□□□□□ -2.03
UPF3A-207ENST00000481131 BORCS7Q96B45 105 aa2.39□□□□□ -2.03
UPF3A-207ENST00000481131 SEC11CQ9BY50 192 aa2.39□□□□□ -2.03
UPF3A-207ENST00000481131 TMEM191AQ9H0A3 160 aa2.39□□□□□ -2.03
UPF3A-207ENST00000481131 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.38□□□□□ -2.03
UPF3A-207ENST00000481131 TRBV6-8A0A0A6YYG3 113 aa2.38□□□□□ -2.03
UPF3A-207ENST00000481131 A0A1W2PNM2 257 aa2.38□□□□□ -2.03
UPF3A-207ENST00000481131 IGKV2-29A2NJV5 120 aaPredicted RBP2.38□□□□□ -2.03
UPF3A-207ENST00000481131 C7orf77A4D0Y5 90 aa2.38□□□□□ -2.03
UPF3A-207ENST00000481131 SDHAF1A6NFY7 115 aa2.38□□□□□ -2.03
UPF3A-207ENST00000481131 D6R8Y8 96 aa2.38□□□□□ -2.03
UPF3A-207ENST00000481131 NPYP01303 97 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 101.4 ms