RNA–Protein interactions for RNA: ENST00000479080.1

CHD3-210, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-210ENST00000479080 PCP2Q8IVA1 136 aa8.52□□□□□ -1.05
CHD3-210ENST00000479080 Q8N814 137 aa8.52□□□□□ -1.05
CHD3-210ENST00000479080 PAM16Q9Y3D7 125 aa8.52□□□□□ -1.05
CHD3-210ENST00000479080 LRP1BQ9NZR2 4599 aa8.52□□□□□ -1.05
CHD3-210ENST00000479080 CFAP161Q6P656 301 aa8.51□□□□□ -1.05
CHD3-210ENST00000479080 UNQ6190/PRO20217Q6UXQ8 127 aa8.51□□□□□ -1.05
CHD3-210ENST00000479080 PLEKHB2Q96CS7 222 aa8.51□□□□□ -1.05
CHD3-210ENST00000479080 C2orf48Q96LS8 159 aa8.51□□□□□ -1.05
CHD3-210ENST00000479080 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.5□□□□□ -1.05
CHD3-210ENST00000479080 A0A1B0GVY2 172 aa8.5□□□□□ -1.05
CHD3-210ENST00000479080 KRTAP10-2P60368 255 aa8.5□□□□□ -1.05
CHD3-210ENST00000479080 SPATA45Q537H7 98 aa8.5□□□□□ -1.05
CHD3-210ENST00000479080 VAMP8Q9BV40 100 aa8.5□□□□□ -1.05
CHD3-210ENST00000479080 C6orf48Q9UBA6 75 aa8.5□□□□□ -1.05
CHD3-210ENST00000479080 NDUFA1O15239 70 aa8.49□□□□□ -1.05
CHD3-210ENST00000479080 NMUP48645 174 aa8.49□□□□□ -1.05
CHD3-210ENST00000479080 NDUFA12Q9UI09 145 aa8.49□□□□□ -1.05
CHD3-210ENST00000479080 PKHD1P08F94 4074 aa8.49□□□□□ -1.05
CHD3-210ENST00000479080 ZNF561-AS1K7EIQ3 104 aa8.48□□□□□ -1.05
CHD3-210ENST00000479080 CNBPP62633 177 aaKnown RBP8.48□□□□□ -1.05
CHD3-210ENST00000479080 C9orf116Q5BN46 136 aaPredicted RBP8.48□□□□□ -1.05
CHD3-210ENST00000479080 C6orf226Q5I0X4 101 aa8.48□□□□□ -1.05
CHD3-210ENST00000479080 PRSS2P07478 247 aa8.47□□□□□ -1.05
CHD3-210ENST00000479080 LGALS3P17931 250 aaKnown RBP8.47□□□□□ -1.05
CHD3-210ENST00000479080 SYCNQ0VAF6 134 aa8.47□□□□□ -1.05
CHD3-210ENST00000479080 C14orf177Q52M58 125 aa8.47□□□□□ -1.05
CHD3-210ENST00000479080 LINC00518Q8N0U6 118 aa8.47□□□□□ -1.05
CHD3-210ENST00000479080 CAMK2N2Q96S95 79 aa8.47□□□□□ -1.05
CHD3-210ENST00000479080 HSBP1L1C9JCN9 74 aa8.46□□□□□ -1.06
CHD3-210ENST00000479080 LINC01620Q4KN68 170 aa8.46□□□□□ -1.06
CHD3-210ENST00000479080 LINC00336Q6ZUF6 198 aa8.46□□□□□ -1.06
CHD3-210ENST00000479080 C12orf57Q99622 126 aa8.46□□□□□ -1.06
CHD3-210ENST00000479080 A0A0J9YXY3 114 aa8.45□□□□□ -1.06
CHD3-210ENST00000479080 ZNF815PA8K554 130 aa8.45□□□□□ -1.06
CHD3-210ENST00000479080 COX8AP10176 69 aa8.45□□□□□ -1.06
CHD3-210ENST00000479080 CXCL5P42830 114 aa8.45□□□□□ -1.06
CHD3-210ENST00000479080 BOD1L2Q8IYS8 172 aa8.45□□□□□ -1.06
CHD3-210ENST00000479080 C14orf144Q96I85 54 aa8.45□□□□□ -1.06
CHD3-210ENST00000479080 CARD19Q96LW7 228 aa8.45□□□□□ -1.06
CHD3-210ENST00000479080 LITAFQ99732 161 aa8.45□□□□□ -1.06
CHD3-210ENST00000479080 APOBP04114 4563 aaKnown RBP8.45□□□□□ -1.06
CHD3-210ENST00000479080 MYMXA0A1B0GTQ4 84 aa8.44□□□□□ -1.06
CHD3-210ENST00000479080 F8WDY8 70 aa8.44□□□□□ -1.06
CHD3-210ENST00000479080 CKS1BP61024 79 aa8.44□□□□□ -1.06
CHD3-210ENST00000479080 TRBV30A0A0K0K1B3 111 aa8.43□□□□□ -1.06
CHD3-210ENST00000479080 C9orf163Q8N9P6 203 aa8.43□□□□□ -1.06
CHD3-210ENST00000479080 RNF151Q2KHN1 245 aa8.42□□□□□ -1.06
CHD3-210ENST00000479080 C2orf91Q6ZV80 131 aa8.42□□□□□ -1.06
CHD3-210ENST00000479080 PRO1933Q9H354 126 aa8.42□□□□□ -1.06
CHD3-210ENST00000479080 DLEU1O43261 78 aa8.41□□□□□ -1.06
CHD3-210ENST00000479080 SMIM13P0DJ93 91 aa8.41□□□□□ -1.06
CHD3-210ENST00000479080 HERV-K104P63124 156 aa8.41□□□□□ -1.06
CHD3-210ENST00000479080 ADAMTSL4-AS1Q5T5F5 129 aa8.41□□□□□ -1.06
CHD3-210ENST00000479080 ERG28Q9UKR5 140 aa8.41□□□□□ -1.06
CHD3-210ENST00000479080 A0A0U1RRA0 63 aa8.4□□□□□ -1.06
CHD3-210ENST00000479080 PANO1I0J062 215 aa8.4□□□□□ -1.06
CHD3-210ENST00000479080 EIF4EBP3O60516 100 aaPredicted RBP8.4□□□□□ -1.06
CHD3-210ENST00000479080 TLX1NBP0CAT3 122 aa8.4□□□□□ -1.06
CHD3-210ENST00000479080 S100A12P80511 92 aa8.4□□□□□ -1.06
CHD3-210ENST00000479080 Q6ZRP5 223 aa8.4□□□□□ -1.06
CHD3-210ENST00000479080 IGLV5-52A0A0A0MRZ9 124 aa8.39□□□□□ -1.07
CHD3-210ENST00000479080 EREGO14944 169 aa8.39□□□□□ -1.07
CHD3-210ENST00000479080 PFN2P35080 140 aa8.39□□□□□ -1.07
CHD3-210ENST00000479080 SFTA2Q6UW10 78 aa8.39□□□□□ -1.07
CHD3-210ENST00000479080 SDIM1Q6ZPB5 146 aa8.39□□□□□ -1.07
CHD3-210ENST00000479080 DAND5Q8N907 189 aa8.39□□□□□ -1.07
CHD3-210ENST00000479080 A0A096LNI7 61 aa8.38□□□□□ -1.07
CHD3-210ENST00000479080 SLC25A34Q6PIV7 304 aa8.38□□□□□ -1.07
CHD3-210ENST00000479080 SOSTDC1Q6X4U4 206 aa8.38□□□□□ -1.07
CHD3-210ENST00000479080 Q8NDZ9 215 aa8.38□□□□□ -1.07
CHD3-210ENST00000479080 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.37□□□□□ -1.07
CHD3-210ENST00000479080 NDUFC2-KCTD14E9PQ53 114 aa8.37□□□□□ -1.07
CHD3-210ENST00000479080 TIMM17BO60830 172 aa8.37□□□□□ -1.07
CHD3-210ENST00000479080 CHTF8P0CG12 524 aa8.37□□□□□ -1.07
CHD3-210ENST00000479080 KRTAP10-1P60331 282 aa8.37□□□□□ -1.07
CHD3-210ENST00000479080 MEIG1Q5JSS6 88 aa8.37□□□□□ -1.07
CHD3-210ENST00000479080 RYR1P21817 5038 aa8.36□□□□□ -1.07
CHD3-210ENST00000479080 C9orf129Q5T035 196 aaKnown RBP8.36□□□□□ -1.07
CHD3-210ENST00000479080 KRTAP7-1Q8IUC3 87 aa8.36□□□□□ -1.07
CHD3-210ENST00000479080 MIR7-3HGQ8N6C7 128 aa8.36□□□□□ -1.07
CHD3-210ENST00000479080 PGPEP1Q9NXJ5 209 aa8.36□□□□□ -1.07
CHD3-210ENST00000479080 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.36□□□□□ -1.07
CHD3-210ENST00000479080 LOC107984640A0A0U1RRK4 108 aa8.35□□□□□ -1.07
CHD3-210ENST00000479080 LINC00158P58513 81 aa8.35□□□□□ -1.07
CHD3-210ENST00000479080 RPL18AQ02543 176 aaKnown RBP8.35□□□□□ -1.07
CHD3-210ENST00000479080 SCGB1D4Q6XE38 83 aa8.35□□□□□ -1.07
CHD3-210ENST00000479080 FAM30AQ9NZY2 134 aa8.35□□□□□ -1.07
CHD3-210ENST00000479080 PTTG1IPP53801 180 aa8.34□□□□□ -1.07
CHD3-210ENST00000479080 COX17Q14061 63 aa8.34□□□□□ -1.07
CHD3-210ENST00000479080 GAGE2EQ4V326 116 aa8.34□□□□□ -1.07
CHD3-210ENST00000479080 SPANXDQ9BXN6 97 aa8.34□□□□□ -1.07
CHD3-210ENST00000479080 SND1-IT1Q9HBX3 110 aa8.34□□□□□ -1.07
CHD3-210ENST00000479080 XAGE1AQ9HD64 81 aa8.34□□□□□ -1.07
CHD3-210ENST00000479080 SPANXB1Q9NS25 103 aaPredicted RBP8.34□□□□□ -1.07
CHD3-210ENST00000479080 SPANXCQ9NY87 97 aa8.34□□□□□ -1.07
CHD3-210ENST00000479080 HIGD1BQ9P298 99 aa8.34□□□□□ -1.07
CHD3-210ENST00000479080 UQCR10Q9UDW1 63 aa8.34□□□□□ -1.07
CHD3-210ENST00000479080 GAGE2DQ9UEU5 116 aa8.34□□□□□ -1.07
CHD3-210ENST00000479080 C16orf90A8MZG2 172 aa8.33□□□□□ -1.08
CHD3-210ENST00000479080 GCSHP23434 173 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms