RNA–Protein interactions for RNA: ENST00000468844.1

RPL39-202, Transcript of ribosomal protein L39, humanhuman

TSL 1 (best)

Gene RPL39, Length 1,915 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-202ENST00000468844 IGHV3-64A0A075B6Q5 118 aa11.64□□□□□ -0.55
RPL39-202ENST00000468844 COX7A2LO14548 114 aa11.64□□□□□ -0.55
RPL39-202ENST00000468844 TAL2Q16559 108 aa11.64□□□□□ -0.55
RPL39-202ENST00000468844 CEND1Q8N111 149 aa11.64□□□□□ -0.55
RPL39-202ENST00000468844 RMI2Q96E14 147 aa11.64□□□□□ -0.55
RPL39-202ENST00000468844 K7EP34 96 aa11.63□□□□□ -0.55
RPL39-202ENST00000468844 NAA38Q9BRA0 125 aaKnown RBP11.63□□□□□ -0.55
RPL39-202ENST00000468844 A0A1W2PPM0 123 aa11.62□□□□□ -0.55
RPL39-202ENST00000468844 IGHV1-58A0A0C4DH39 117 aa11.61□□□□□ -0.55
RPL39-202ENST00000468844 IGLV5-39A0A0G2JS06 123 aa11.61□□□□□ -0.55
RPL39-202ENST00000468844 E9PLD3 99 aa11.6□□□□□ -0.55
RPL39-202ENST00000468844 MALP21145 153 aa11.6□□□□□ -0.55
RPL39-202ENST00000468844 HERVK_113P61574 105 aa11.6□□□□□ -0.55
RPL39-202ENST00000468844 OCIAD2Q56VL3 154 aa11.6□□□□□ -0.55
RPL39-202ENST00000468844 Q6ZRN7 208 aaPredicted RBP11.6□□□□□ -0.55
RPL39-202ENST00000468844 MYMXA0A1B0GTQ4 84 aa11.6□□□□□ -0.55
RPL39-202ENST00000468844 LINC01561Q8N1V8 128 aa11.6□□□□□ -0.55
RPL39-202ENST00000468844 LCE6AA0A183 80 aa11.59□□□□□ -0.55
RPL39-202ENST00000468844 FABP2P12104 132 aa11.58□□□□□ -0.55
RPL39-202ENST00000468844 TSPEAR-AS2P59090 65 aa11.58□□□□□ -0.55
RPL39-202ENST00000468844 NHP2Q9NX24 153 aaKnown RBP11.58□□□□□ -0.55
RPL39-202ENST00000468844 C6orf223Q8N319 242 aa11.58□□□□□ -0.56
RPL39-202ENST00000468844 C15orf56Q8N910 161 aa11.58□□□□□ -0.56
RPL39-202ENST00000468844 SPCS1Q9Y6A9 102 aa11.58□□□□□ -0.56
RPL39-202ENST00000468844 DNAH11Q96DT5 4516 aa11.58□□□□□ -0.56
RPL39-202ENST00000468844 K7ERJ3 54 aa11.57□□□□□ -0.56
RPL39-202ENST00000468844 HIST1H4GQ99525 98 aa11.57□□□□□ -0.56
RPL39-202ENST00000468844 RYR3Q15413 4870 aa11.57□□□□□ -0.56
RPL39-202ENST00000468844 LEPROTO15243 131 aa11.56□□□□□ -0.56
RPL39-202ENST00000468844 PSCAO43653 123 aa11.56□□□□□ -0.56
RPL39-202ENST00000468844 APOMO95445 188 aa11.56□□□□□ -0.56
RPL39-202ENST00000468844 TOMM7Q9P0U1 55 aa11.56□□□□□ -0.56
RPL39-202ENST00000468844 J3QQQ9 107 aa11.55□□□□□ -0.56
RPL39-202ENST00000468844 KIAA0087Q14695 138 aa11.54□□□□□ -0.56
RPL39-202ENST00000468844 COX7B2Q8TF08 81 aa11.54□□□□□ -0.56
RPL39-202ENST00000468844 PKD1P98161 4303 aa11.54□□□□□ -0.56
RPL39-202ENST00000468844 LECT2O14960 151 aa11.54□□□□□ -0.56
RPL39-202ENST00000468844 WFDC2Q14508 124 aa11.54□□□□□ -0.56
RPL39-202ENST00000468844 RNF151Q2KHN1 245 aa11.54□□□□□ -0.56
RPL39-202ENST00000468844 Q8IZM0 81 aa11.54□□□□□ -0.56
RPL39-202ENST00000468844 PLEKHB2Q96CS7 222 aa11.54□□□□□ -0.56
RPL39-202ENST00000468844 DNAH5Q8TE73 4624 aa11.54□□□□□ -0.56
RPL39-202ENST00000468844 USP17L23D6RBM5 183 aa11.53□□□□□ -0.56
RPL39-202ENST00000468844 K7ERU9 68 aa11.53□□□□□ -0.56
RPL39-202ENST00000468844 C1orf134Q5TEV5 83 aa11.53□□□□□ -0.56
RPL39-202ENST00000468844 LINC00526Q96FQ7 95 aa11.53□□□□□ -0.56
RPL39-202ENST00000468844 SPAG11BQ08648 103 aa11.52□□□□□ -0.56
RPL39-202ENST00000468844 HIGD2BQ4VC39 106 aa11.52□□□□□ -0.56
RPL39-202ENST00000468844 A0A1B0GWB2 263 aa11.52□□□□□ -0.57
RPL39-202ENST00000468844 ZNF815PA8K554 130 aa11.52□□□□□ -0.57
RPL39-202ENST00000468844 GVQW2A0A096LPI5 108 aaPredicted RBP11.51□□□□□ -0.57
RPL39-202ENST00000468844 LGALS3P17931 250 aaKnown RBP11.51□□□□□ -0.57
RPL39-202ENST00000468844 LRCOL1A6NCL2 159 aa11.5□□□□□ -0.57
RPL39-202ENST00000468844 PRSS2P07478 247 aa11.5□□□□□ -0.57
RPL39-202ENST00000468844 C6orf226Q5I0X4 101 aa11.5□□□□□ -0.57
RPL39-202ENST00000468844 CFAP161Q6P656 301 aa11.5□□□□□ -0.57
RPL39-202ENST00000468844 NDUFA12Q9UI09 145 aa11.5□□□□□ -0.57
RPL39-202ENST00000468844 ZNF561-AS1K7EIQ3 104 aa11.49□□□□□ -0.57
RPL39-202ENST00000468844 PCP4P48539 62 aa11.49□□□□□ -0.57
RPL39-202ENST00000468844 C2orf82Q6UX34 121 aa11.49□□□□□ -0.57
RPL39-202ENST00000468844 ZNF625Q96I27 306 aaPredicted RBP11.49□□□□□ -0.57
RPL39-202ENST00000468844 SCGB1D4Q6XE38 83 aa11.48□□□□□ -0.57
RPL39-202ENST00000468844 NTN5Q8WTR8 489 aaPredicted RBP11.48□□□□□ -0.57
RPL39-202ENST00000468844 VPS25Q9BRG1 176 aa11.48□□□□□ -0.57
RPL39-202ENST00000468844 NDUFA1O15239 70 aa11.47□□□□□ -0.57
RPL39-202ENST00000468844 RTL8CO15255 209 aa11.47□□□□□ -0.57
RPL39-202ENST00000468844 CXCL5P42830 114 aa11.46□□□□□ -0.58
RPL39-202ENST00000468844 CKS1BP61024 79 aa11.46□□□□□ -0.58
RPL39-202ENST00000468844 SRSF9Q13242 221 aaKnown RBP eCLIP11.45□□□□□ -0.58
RPL39-202ENST00000468844 C10orf25Q5T742 122 aa11.45□□□□□ -0.58
RPL39-202ENST00000468844 PKHD1P08F94 4074 aa11.45□□□□□ -0.58
RPL39-202ENST00000468844 TMEM238LA0A1B0GVL6 79 aa11.45□□□□□ -0.58
RPL39-202ENST00000468844 A6NJY4 79 aa11.45□□□□□ -0.58
RPL39-202ENST00000468844 SLPIP03973 132 aa11.45□□□□□ -0.58
RPL39-202ENST00000468844 UNQ6190/PRO20217Q6UXQ8 127 aa11.45□□□□□ -0.58
RPL39-202ENST00000468844 C2orf48Q96LS8 159 aa11.45□□□□□ -0.58
RPL39-202ENST00000468844 A0A087WTM6 91 aa11.44□□□□□ -0.58
RPL39-202ENST00000468844 CAMK2N2Q96S95 79 aa11.44□□□□□ -0.58
RPL39-202ENST00000468844 A0A0J9YXY3 114 aa11.43□□□□□ -0.58
RPL39-202ENST00000468844 SFTA2Q6UW10 78 aa11.43□□□□□ -0.58
RPL39-202ENST00000468844 SPANXB1Q9NS25 103 aaPredicted RBP11.43□□□□□ -0.58
RPL39-202ENST00000468844 F8W1H4 67 aa11.42□□□□□ -0.58
RPL39-202ENST00000468844 TNP2Q05952 138 aa11.42□□□□□ -0.58
RPL39-202ENST00000468844 C14orf177Q52M58 125 aa11.42□□□□□ -0.58
RPL39-202ENST00000468844 Q6ZRU5 148 aa11.42□□□□□ -0.58
RPL39-202ENST00000468844 Q8N814 137 aa11.41□□□□□ -0.58
RPL39-202ENST00000468844 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.41□□□□□ -0.58
RPL39-202ENST00000468844 HERV-K104P63124 156 aa11.41□□□□□ -0.58
RPL39-202ENST00000468844 C9orf116Q5BN46 136 aaPredicted RBP11.41□□□□□ -0.58
RPL39-202ENST00000468844 C6orf48Q9UBA6 75 aa11.41□□□□□ -0.58
RPL39-202ENST00000468844 H3BMG7 143 aa11.4□□□□□ -0.58
RPL39-202ENST00000468844 SYCNQ0VAF6 134 aa11.4□□□□□ -0.58
RPL39-202ENST00000468844 C21orf62-AS1Q17RA5 79 aa11.4□□□□□ -0.58
RPL39-202ENST00000468844 PGPEP1Q9NXJ5 209 aa11.4□□□□□ -0.58
RPL39-202ENST00000468844 F8WDY8 70 aa11.39□□□□□ -0.59
RPL39-202ENST00000468844 TRBV30A0A0K0K1B3 111 aa11.38□□□□□ -0.59
RPL39-202ENST00000468844 CNBPP62633 177 aaKnown RBP11.38□□□□□ -0.59
RPL39-202ENST00000468844 MEIG1Q5JSS6 88 aa11.38□□□□□ -0.59
RPL39-202ENST00000468844 CARD19Q96LW7 228 aa11.38□□□□□ -0.59
RPL39-202ENST00000468844 RPL24P83731 157 aaKnown RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms