RNA–Protein interactions for RNA: ENST00000467663.5

CTNS-205, Transcript of cystinosin, lysosomal cystine transporter, human

TSL 3

Gene CTNS, Length 590 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNS-205	ENST00000467663	SPINK8	P0C7L1	97 aa		8	□□□□□ -1.13
CTNS-205	ENST00000467663	CXCL5	P42830	114 aa		8	□□□□□ -1.13
CTNS-205	ENST00000467663	CFAP161	Q6P656	301 aa		8	□□□□□ -1.13
CTNS-205	ENST00000467663		Q8IZM0	81 aa		8	□□□□□ -1.13
CTNS-205	ENST00000467663	MAPKAPK5-AS1	Q8N8E1	139 aa		8	□□□□□ -1.13
CTNS-205	ENST00000467663	C14orf144	Q96I85	54 aa		8	□□□□□ -1.13
CTNS-205	ENST00000467663	IGHV3-64	A0A075B6Q5	118 aa		7.99	□□□□□ -1.13
CTNS-205	ENST00000467663	LINC00587	B1AMM8	73 aa		7.99	□□□□□ -1.13
CTNS-205	ENST00000467663	HERV-K104	P63124	156 aa		7.99	□□□□□ -1.13
CTNS-205	ENST00000467663	C5orf38	Q86SI9	138 aa		7.99	□□□□□ -1.13
CTNS-205	ENST00000467663	PRO1933	Q9H354	126 aa		7.99	□□□□□ -1.13
CTNS-205	ENST00000467663	HIGD1B	Q9P298	99 aa		7.99	□□□□□ -1.13
CTNS-205	ENST00000467663	HSPG2	P98160	4391 aa		7.98	□□□□□ -1.13
CTNS-205	ENST00000467663	IGLV10-54	A0A075B6I4	117 aa		7.98	□□□□□ -1.13
CTNS-205	ENST00000467663	IGKV2D-24	A0A075B6R9	120 aa		7.98	□□□□□ -1.13
CTNS-205	ENST00000467663	ZNF815P	A8K554	130 aa		7.98	□□□□□ -1.13
CTNS-205	ENST00000467663	PRSS2	P07478	247 aa		7.98	□□□□□ -1.13
CTNS-205	ENST00000467663	KRTAP26-1	Q6PEX3	210 aa		7.98	□□□□□ -1.13
CTNS-205	ENST00000467663		Q8N1X5	172 aa		7.98	□□□□□ -1.13
CTNS-205	ENST00000467663	COX7B2	Q8TF08	81 aa		7.98	□□□□□ -1.13
CTNS-205	ENST00000467663	NDUFA1	O15239	70 aa		7.97	□□□□□ -1.13
CTNS-205	ENST00000467663	GCSH	P23434	173 aa		7.97	□□□□□ -1.13
CTNS-205	ENST00000467663	DDT	P30046	118 aa		7.97	□□□□□ -1.13
CTNS-205	ENST00000467663	FUS	P35637	526 aa	Known RBP eCLIP	7.97	□□□□□ -1.13
CTNS-205	ENST00000467663	HNRNPA3	P51991	378 aa	Known RBP	7.97	□□□□□ -1.13
CTNS-205	ENST00000467663	PCP2	Q8IVA1	136 aa		7.97	□□□□□ -1.13
CTNS-205	ENST00000467663	NDUFA12	Q9UI09	145 aa		7.97	□□□□□ -1.13
CTNS-205	ENST00000467663	LRCOL1	A6NCL2	159 aa		7.96	□□□□□ -1.14
CTNS-205	ENST00000467663	C6orf226	Q5I0X4	101 aa		7.96	□□□□□ -1.14
CTNS-205	ENST00000467663	ABCA13	Q86UQ4	5058 aa		7.96	□□□□□ -1.14
CTNS-205	ENST00000467663	DNAH5	Q8TE73	4624 aa		7.96	□□□□□ -1.14
CTNS-205	ENST00000467663	PSCA	O43653	123 aa		7.95	□□□□□ -1.14
CTNS-205	ENST00000467663	TIMM17B	O60830	172 aa		7.95	□□□□□ -1.14
CTNS-205	ENST00000467663	CIRBP	Q14011	172 aa	Known RBP	7.95	□□□□□ -1.14
CTNS-205	ENST00000467663	TAL2	Q16559	108 aa		7.95	□□□□□ -1.14
CTNS-205	ENST00000467663	SCGB1D4	Q6XE38	83 aa		7.95	□□□□□ -1.14
CTNS-205	ENST00000467663		Q6ZVH6	145 aa		7.95	□□□□□ -1.14
CTNS-205	ENST00000467663	ORAOV1	Q8WV07	137 aa		7.95	□□□□□ -1.14
CTNS-205	ENST00000467663	TSPEAR-AS2	P59090	65 aa		7.94	□□□□□ -1.14
CTNS-205	ENST00000467663	KRTAP10-1	P60331	282 aa		7.94	□□□□□ -1.14
CTNS-205	ENST00000467663	C2orf48	Q96LS8	159 aa		7.94	□□□□□ -1.14
CTNS-205	ENST00000467663		Q9HAA7	133 aa		7.94	□□□□□ -1.14
CTNS-205	ENST00000467663	TOMM7	Q9P0U1	55 aa		7.94	□□□□□ -1.14
CTNS-205	ENST00000467663	APOB	P04114	4563 aa	Known RBP	7.94	□□□□□ -1.14
CTNS-205	ENST00000467663	TMEM238	C9JI98	176 aa		7.93	□□□□□ -1.14
CTNS-205	ENST00000467663	XG	P55808	180 aa		7.93	□□□□□ -1.14
CTNS-205	ENST00000467663	CKS1B	P61024	79 aa		7.93	□□□□□ -1.14
CTNS-205	ENST00000467663	KIAA0087	Q14695	138 aa		7.93	□□□□□ -1.14
CTNS-205	ENST00000467663	NTN5	Q8WTR8	489 aa	Predicted RBP	7.93	□□□□□ -1.14
CTNS-205	ENST00000467663	COPS9	Q8WXC6	57 aa		7.93	□□□□□ -1.14
CTNS-205	ENST00000467663	ZNF625	Q96I27	306 aa	Predicted RBP	7.93	□□□□□ -1.14
CTNS-205	ENST00000467663	SPANXB1	Q9NS25	103 aa	Predicted RBP	7.93	□□□□□ -1.14
CTNS-205	ENST00000467663		A0A0J9YXY3	114 aa		7.92	□□□□□ -1.14
CTNS-205	ENST00000467663	ZNF561-AS1	K7EIQ3	104 aa		7.92	□□□□□ -1.14
CTNS-205	ENST00000467663	SPAG11B	Q08648	103 aa		7.92	□□□□□ -1.14
CTNS-205	ENST00000467663	C14orf177	Q52M58	125 aa		7.92	□□□□□ -1.14
CTNS-205	ENST00000467663		Q8N814	137 aa		7.92	□□□□□ -1.14
CTNS-205	ENST00000467663	PPDPF	Q9H3Y8	114 aa		7.92	□□□□□ -1.14
CTNS-205	ENST00000467663	GVQW2	A0A096LPI5	108 aa	Predicted RBP	7.91	□□□□□ -1.14
CTNS-205	ENST00000467663	HSD52	Q0P140	79 aa		7.91	□□□□□ -1.14
CTNS-205	ENST00000467663	COX17	Q14061	63 aa		7.91	□□□□□ -1.14
CTNS-205	ENST00000467663	C2orf91	Q6ZV80	131 aa		7.91	□□□□□ -1.14
CTNS-205	ENST00000467663	TTTY13	Q9BZ97	58 aa		7.91	□□□□□ -1.14
CTNS-205	ENST00000467663	IGLV5-52	A0A0A0MRZ9	124 aa		7.9	□□□□□ -1.14
CTNS-205	ENST00000467663	PCP4L1	A6NKN8	68 aa		7.9	□□□□□ -1.14
CTNS-205	ENST00000467663		M0R143	59 aa		7.9	□□□□□ -1.14
CTNS-205	ENST00000467663	TP73-AS1	Q9UF72	201 aa		7.9	□□□□□ -1.14
CTNS-205	ENST00000467663	TRBV30	A0A0K0K1B3	111 aa		7.89	□□□□□ -1.15
CTNS-205	ENST00000467663	IFITM1	P13164	125 aa		7.89	□□□□□ -1.15
CTNS-205	ENST00000467663	PTTG1IP	P53801	180 aa		7.89	□□□□□ -1.15
CTNS-205	ENST00000467663	C15orf56	Q8N910	161 aa		7.89	□□□□□ -1.15
CTNS-205	ENST00000467663	SPANXD	Q9BXN6	97 aa		7.89	□□□□□ -1.15
CTNS-205	ENST00000467663	SPANXC	Q9NY87	97 aa		7.89	□□□□□ -1.15
CTNS-205	ENST00000467663	CTAG1A	P78358	180 aa		7.88	□□□□□ -1.15
CTNS-205	ENST00000467663	SRSF9	Q13242	221 aa	Known RBP eCLIP	7.88	□□□□□ -1.15
CTNS-205	ENST00000467663	RNF151	Q2KHN1	245 aa		7.88	□□□□□ -1.15
CTNS-205	ENST00000467663	MEIG1	Q5JSS6	88 aa		7.88	□□□□□ -1.15
CTNS-205	ENST00000467663	EPM2A	B3EWF7	344 aa		7.87	□□□□□ -1.15
CTNS-205	ENST00000467663	USP17L23	D6RBM5	183 aa		7.87	□□□□□ -1.15
CTNS-205	ENST00000467663	WFDC2	Q14508	124 aa		7.87	□□□□□ -1.15
CTNS-205	ENST00000467663	CAMK2N2	Q96S95	79 aa		7.87	□□□□□ -1.15
CTNS-205	ENST00000467663	HIST1H4G	Q99525	98 aa		7.87	□□□□□ -1.15
CTNS-205	ENST00000467663	TMEM238L	A0A1B0GVL6	79 aa		7.86	□□□□□ -1.15
CTNS-205	ENST00000467663		A6NJY4	79 aa		7.86	□□□□□ -1.15
CTNS-205	ENST00000467663	ERG28	Q9UKR5	140 aa		7.86	□□□□□ -1.15
CTNS-205	ENST00000467663	PKIG	Q9Y2B9	76 aa		7.86	□□□□□ -1.15
CTNS-205	ENST00000467663	RPL24	P83731	157 aa	Known RBP	7.85	□□□□□ -1.15
CTNS-205	ENST00000467663	SYCN	Q0VAF6	134 aa		7.85	□□□□□ -1.15
CTNS-205	ENST00000467663	CEND1	Q8N111	149 aa		7.85	□□□□□ -1.15
CTNS-205	ENST00000467663	LITAF	Q99732	161 aa		7.85	□□□□□ -1.15
CTNS-205	ENST00000467663	LBH	Q53QV2	105 aa	Predicted RBP	7.84	□□□□□ -1.15
CTNS-205	ENST00000467663	C2orf82	Q6UX34	121 aa		7.84	□□□□□ -1.15
CTNS-205	ENST00000467663	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	7.83	□□□□□ -1.16
CTNS-205	ENST00000467663	LECT2	O14960	151 aa		7.83	□□□□□ -1.16
CTNS-205	ENST00000467663	LINC00158	P58513	81 aa		7.83	□□□□□ -1.16
CTNS-205	ENST00000467663	HIGD2B	Q4VC39	106 aa		7.83	□□□□□ -1.16
CTNS-205	ENST00000467663		Q5VSD8	79 aa		7.83	□□□□□ -1.16
CTNS-205	ENST00000467663	UNQ6190/PRO20217	Q6UXQ8	127 aa		7.83	□□□□□ -1.16
CTNS-205	ENST00000467663	FAM30A	Q9NZY2	134 aa		7.83	□□□□□ -1.16
CTNS-205	ENST00000467663	LOC107984156	A0A0G2JMH3	177 aa		7.82	□□□□□ -1.16

Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms