RNA–Protein interactions for RNA: ENST00000462730.5

HDAC6-213, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-213ENST00000462730 A0A0J9YWU9 116 aa10.02□□□□□ -0.81
HDAC6-213ENST00000462730 Q1RN00 199 aa10.02□□□□□ -0.81
HDAC6-213ENST00000462730 LITAFQ99732 161 aa10.02□□□□□ -0.81
HDAC6-213ENST00000462730 TRBV10-2A0A0K0K1G8 114 aa10.01□□□□□ -0.81
HDAC6-213ENST00000462730 FAM240AA0A1B0GVK7 77 aa10.01□□□□□ -0.81
HDAC6-213ENST00000462730 NHLRC4P0CG21 123 aaPredicted RBP10.01□□□□□ -0.81
HDAC6-213ENST00000462730 TM2D3Q9BRN9 247 aa10.01□□□□□ -0.81
HDAC6-213ENST00000462730 ICOSQ9Y6W8 199 aa10.01□□□□□ -0.81
HDAC6-213ENST00000462730 IGLV5-39A0A0G2JS06 123 aa10.01□□□□□ -0.81
HDAC6-213ENST00000462730 H3BT86 120 aa10.01□□□□□ -0.81
HDAC6-213ENST00000462730 SMIM1B2RUZ4 78 aa10□□□□□ -0.81
HDAC6-213ENST00000462730 LINC01620Q4KN68 170 aa10□□□□□ -0.81
HDAC6-213ENST00000462730 C5orf47Q569G3 176 aa10□□□□□ -0.81
HDAC6-213ENST00000462730 HUWE1Q7Z6Z7 4374 aaKnown RBP10□□□□□ -0.81
HDAC6-213ENST00000462730 DNHD1Q96M86 4753 aa9.99□□□□□ -0.81
HDAC6-213ENST00000462730 A0A1B0GUV1 79 aa9.99□□□□□ -0.81
HDAC6-213ENST00000462730 COX6CP09669 75 aa9.99□□□□□ -0.81
HDAC6-213ENST00000462730 IFITM1P13164 125 aa9.99□□□□□ -0.81
HDAC6-213ENST00000462730 NDUFV3P56181 108 aaKnown RBP9.99□□□□□ -0.81
HDAC6-213ENST00000462730 TTC32Q5I0X7 151 aa9.99□□□□□ -0.81
HDAC6-213ENST00000462730 Q6ZTC4 211 aa9.99□□□□□ -0.81
HDAC6-213ENST00000462730 TRAV8-4A0A0B4J246 113 aa9.98□□□□□ -0.81
HDAC6-213ENST00000462730 TRIAP1O43715 76 aa9.98□□□□□ -0.81
HDAC6-213ENST00000462730 SPANXCQ9NY87 97 aa9.98□□□□□ -0.81
HDAC6-213ENST00000462730 NDUFA1O15239 70 aa9.97□□□□□ -0.81
HDAC6-213ENST00000462730 PRSS2P07478 247 aa9.97□□□□□ -0.81
HDAC6-213ENST00000462730 ADAMTSL4-AS1Q5T5F5 129 aa9.97□□□□□ -0.81
HDAC6-213ENST00000462730 TMEM126AQ9H061 195 aa9.97□□□□□ -0.81
HDAC6-213ENST00000462730 LINC00959A0A1B0GUT2 108 aa9.97□□□□□ -0.81
HDAC6-213ENST00000462730 UBE2WQ96B02 151 aa9.97□□□□□ -0.81
HDAC6-213ENST00000462730 NANOS2P60321 138 aaKnown RBP9.96□□□□□ -0.81
HDAC6-213ENST00000462730 MIAQ16674 131 aa9.96□□□□□ -0.81
HDAC6-213ENST00000462730 CLPSL2Q6UWE3 100 aa9.96□□□□□ -0.81
HDAC6-213ENST00000462730 C11orf45Q8TAV5 145 aa9.96□□□□□ -0.81
HDAC6-213ENST00000462730 NTN5Q8WTR8 489 aaPredicted RBP9.96□□□□□ -0.81
HDAC6-213ENST00000462730 LELP1Q5T871 98 aa9.95□□□□□ -0.82
HDAC6-213ENST00000462730 TIMM17BO60830 172 aa9.95□□□□□ -0.82
HDAC6-213ENST00000462730 Q8N3U1 123 aa9.95□□□□□ -0.82
HDAC6-213ENST00000462730 Q9H8V8 135 aa9.95□□□□□ -0.82
HDAC6-213ENST00000462730 IGHV3OR16-9A0A0B4J2B5 98 aa9.94□□□□□ -0.82
HDAC6-213ENST00000462730 ACYP1P07311 99 aa9.94□□□□□ -0.82
HDAC6-213ENST00000462730 SS18Q15532 418 aa9.94□□□□□ -0.82
HDAC6-213ENST00000462730 TEX49A0A1B0GTD5 131 aa9.92□□□□□ -0.82
HDAC6-213ENST00000462730 ANGP03950 147 aaKnown RBP9.92□□□□□ -0.82
HDAC6-213ENST00000462730 XCL1P47992 114 aa9.92□□□□□ -0.82
HDAC6-213ENST00000462730 NPC2P61916 151 aa9.92□□□□□ -0.82
HDAC6-213ENST00000462730 C5orf38Q86SI9 138 aa9.92□□□□□ -0.82
HDAC6-213ENST00000462730 LINC00269Q8N2A0 174 aa9.92□□□□□ -0.82
HDAC6-213ENST00000462730 A0A087WZ39 114 aa9.92□□□□□ -0.82
HDAC6-213ENST00000462730 H3BNG1 76 aa9.92□□□□□ -0.82
HDAC6-213ENST00000462730 COX7B2Q8TF08 81 aa9.92□□□□□ -0.82
HDAC6-213ENST00000462730 COPS9Q8WXC6 57 aa9.92□□□□□ -0.82
HDAC6-213ENST00000462730 IMUPQ9GZP8 106 aa9.92□□□□□ -0.82
HDAC6-213ENST00000462730 DNAH9Q9NYC9 4486 aa9.91□□□□□ -0.82
HDAC6-213ENST00000462730 CCDC179H3BU77 68 aa9.91□□□□□ -0.82
HDAC6-213ENST00000462730 LYPD5Q6UWN5 251 aa9.91□□□□□ -0.82
HDAC6-213ENST00000462730 C2orf82Q6UX34 121 aa9.91□□□□□ -0.82
HDAC6-213ENST00000462730 ZNF625Q96I27 306 aaPredicted RBP9.91□□□□□ -0.82
HDAC6-213ENST00000462730 DEFB131BA0A096LNP1 70 aa9.9□□□□□ -0.82
HDAC6-213ENST00000462730 TOMM7Q9P0U1 55 aa9.9□□□□□ -0.82
HDAC6-213ENST00000462730 TRBV7-7A0A0K0K1E9 115 aa9.9□□□□□ -0.83
HDAC6-213ENST00000462730 C15orf53Q8NAA6 179 aa9.9□□□□□ -0.83
HDAC6-213ENST00000462730 REG3AQ06141 175 aa9.89□□□□□ -0.83
HDAC6-213ENST00000462730 CIRBPQ14011 172 aaKnown RBP9.89□□□□□ -0.83
HDAC6-213ENST00000462730 DAND5Q8N907 189 aa9.88□□□□□ -0.83
HDAC6-213ENST00000462730 PPDPFQ9H3Y8 114 aa9.88□□□□□ -0.83
HDAC6-213ENST00000462730 LST1O00453 97 aa9.88□□□□□ -0.83
HDAC6-213ENST00000462730 MEIG1Q5JSS6 88 aa9.88□□□□□ -0.83
HDAC6-213ENST00000462730 CLEC2BQ92478 149 aa9.88□□□□□ -0.83
HDAC6-213ENST00000462730 B9D2Q9BPU9 175 aa9.88□□□□□ -0.83
HDAC6-213ENST00000462730 A0A0U1RRA0 63 aa9.87□□□□□ -0.83
HDAC6-213ENST00000462730 CHCHD10Q8WYQ3 142 aaPredicted RBP9.87□□□□□ -0.83
HDAC6-213ENST00000462730 IGLV10-54A0A075B6I4 117 aa9.86□□□□□ -0.83
HDAC6-213ENST00000462730 KRTAP21-3Q3LHN1 58 aa9.86□□□□□ -0.83
HDAC6-213ENST00000462730 CD164L2Q6UWJ8 174 aa9.86□□□□□ -0.83
HDAC6-213ENST00000462730 TRAV10A0A0B4J240 114 aa9.85□□□□□ -0.83
HDAC6-213ENST00000462730 LINC01561Q8N1V8 128 aa9.85□□□□□ -0.83
HDAC6-213ENST00000462730 KLK12Q9UKR0 248 aa9.85□□□□□ -0.83
HDAC6-213ENST00000462730 WFDC10BQ8IUB3 73 aa9.84□□□□□ -0.83
HDAC6-213ENST00000462730 COX7A2LO14548 114 aa9.84□□□□□ -0.83
HDAC6-213ENST00000462730 COL7A1Q02388 2944 aa9.84□□□□□ -0.83
HDAC6-213ENST00000462730 LINC00308Q8TCZ7 52 aa9.83□□□□□ -0.84
HDAC6-213ENST00000462730 ESRGQ1W209 222 aa9.83□□□□□ -0.84
HDAC6-213ENST00000462730 C6orf226Q5I0X4 101 aa9.82□□□□□ -0.84
HDAC6-213ENST00000462730 PRR34Q9NV39 138 aa9.82□□□□□ -0.84
HDAC6-213ENST00000462730 Q8IZM0 81 aa9.81□□□□□ -0.84
HDAC6-213ENST00000462730 MALP21145 153 aa9.81□□□□□ -0.84
HDAC6-213ENST00000462730 ENHOQ6UWT2 76 aa9.81□□□□□ -0.84
HDAC6-213ENST00000462730 SOSTDC1Q6X4U4 206 aa9.81□□□□□ -0.84
HDAC6-213ENST00000462730 PRKDCP78527 4128 aaKnown RBP9.8□□□□□ -0.84
HDAC6-213ENST00000462730 CRPP02741 224 aa9.8□□□□□ -0.84
HDAC6-213ENST00000462730 STAB2Q8WWQ8 2551 aa9.79□□□□□ -0.84
HDAC6-213ENST00000462730 A0A1B0GX51 115 aa9.79□□□□□ -0.84
HDAC6-213ENST00000462730 LINC00158P58513 81 aa9.79□□□□□ -0.84
HDAC6-213ENST00000462730 LINC00643Q86TS7 51 aa9.79□□□□□ -0.84
HDAC6-213ENST00000462730 IBA57-AS1B1ANH7 110 aa9.78□□□□□ -0.84
HDAC6-213ENST00000462730 TRACP01848 142 aa9.78□□□□□ -0.84
HDAC6-213ENST00000462730 CXCL5P42830 114 aa9.78□□□□□ -0.84
HDAC6-213ENST00000462730 MIR7-3HGQ8N6C7 128 aa9.78□□□□□ -0.84
HDAC6-213ENST00000462730 KIAA0087Q14695 138 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms