RNA–Protein interactions for RNA: ENST00000457642.1

HMGN1P18-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 18, humanhuman

BASIC

Gene HMGN1P18, Length 277 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P18-201ENST00000457642 SLPIP03973 132 aa2.31□□□□□ -2.04
HMGN1P18-201ENST00000457642 MIFP14174 115 aa2.31□□□□□ -2.04
HMGN1P18-201ENST00000457642 RBM3P98179 157 aaKnown RBP2.31□□□□□ -2.04
HMGN1P18-201ENST00000457642 REG3AQ06141 175 aa2.31□□□□□ -2.04
HMGN1P18-201ENST00000457642 SPAG11BQ08648 103 aa2.31□□□□□ -2.04
HMGN1P18-201ENST00000457642 CLPSL2Q6UWE3 100 aa2.31□□□□□ -2.04
HMGN1P18-201ENST00000457642 LINC00269Q8N2A0 174 aa2.31□□□□□ -2.04
HMGN1P18-201ENST00000457642 BBC3Q96PG8 261 aaPredicted RBP2.31□□□□□ -2.04
HMGN1P18-201ENST00000457642 DSCR8Q96T75 97 aa2.31□□□□□ -2.04
HMGN1P18-201ENST00000457642 LINC00846Q9NV44 126 aa2.31□□□□□ -2.04
HMGN1P18-201ENST00000457642 LAMTOR3Q9UHA4 124 aa2.31□□□□□ -2.04
HMGN1P18-201ENST00000457642 C22orf24Q9Y442 160 aa2.31□□□□□ -2.04
HMGN1P18-201ENST00000457642 MYO9AB2RTY4 2548 aa2.31□□□□□ -2.04
HMGN1P18-201ENST00000457642 USP9YO00507 2555 aaPredicted RBP2.31□□□□□ -2.04
HMGN1P18-201ENST00000457642 LAMA5O15230 3695 aa2.3□□□□□ -2.04
HMGN1P18-201ENST00000457642 WNK1Q9H4A3 2382 aa2.3□□□□□ -2.04
HMGN1P18-201ENST00000457642 MYO18BQ8IUG5 2567 aa2.3□□□□□ -2.04
HMGN1P18-201ENST00000457642 USP9XQ93008 2570 aaPredicted RBP2.3□□□□□ -2.04
HMGN1P18-201ENST00000457642 LOC110117498A0A087WWA1 95 aa2.3□□□□□ -2.04
HMGN1P18-201ENST00000457642 A0A096LPF7 62 aa2.3□□□□□ -2.04
HMGN1P18-201ENST00000457642 NDUFC2-KCTD14E9PQ53 114 aa2.3□□□□□ -2.04
HMGN1P18-201ENST00000457642 SPART-AS1P0CW21 52 aa2.3□□□□□ -2.04
HMGN1P18-201ENST00000457642 C6orf99Q4VX62 202 aa2.3□□□□□ -2.04
HMGN1P18-201ENST00000457642 LELP1Q5T871 98 aa2.3□□□□□ -2.04
HMGN1P18-201ENST00000457642 LINC00575Q6W349 94 aa2.3□□□□□ -2.04
HMGN1P18-201ENST00000457642 C3orf56Q8N813 242 aa2.3□□□□□ -2.04
HMGN1P18-201ENST00000457642 LINC00482Q8N8I6 264 aa2.3□□□□□ -2.04
HMGN1P18-201ENST00000457642 DIRC1Q969H9 104 aa2.3□□□□□ -2.04
HMGN1P18-201ENST00000457642 X6R8D5 127 aa2.3□□□□□ -2.04
HMGN1P18-201ENST00000457642 CACNA1AO00555 2505 aa2.3□□□□□ -2.04
HMGN1P18-201ENST00000457642 PIEZO1Q92508 2521 aa2.29□□□□□ -2.04
HMGN1P18-201ENST00000457642 IGLV10-54A0A075B6I4 117 aa2.29□□□□□ -2.04
HMGN1P18-201ENST00000457642 TRAV23DV6A0A075B6W5 121 aa2.29□□□□□ -2.04
HMGN1P18-201ENST00000457642 GVQW2A0A096LPI5 108 aaPredicted RBP2.29□□□□□ -2.04
HMGN1P18-201ENST00000457642 HTN3P15516 51 aa2.29□□□□□ -2.04
HMGN1P18-201ENST00000457642 COX7BP24311 80 aa2.29□□□□□ -2.04
HMGN1P18-201ENST00000457642 RPS28P62857 69 aaKnown RBP2.29□□□□□ -2.04
HMGN1P18-201ENST00000457642 KIAA0087Q14695 138 aa2.29□□□□□ -2.04
HMGN1P18-201ENST00000457642 DEFB135Q30KP9 77 aa2.29□□□□□ -2.04
HMGN1P18-201ENST00000457642 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.29□□□□□ -2.04
HMGN1P18-201ENST00000457642 C6orf223Q8N319 242 aa2.29□□□□□ -2.04
HMGN1P18-201ENST00000457642 UPK3BQ9BT76 320 aa2.29□□□□□ -2.04
HMGN1P18-201ENST00000457642 PTPN13Q12923 2485 aa2.28□□□□□ -2.04
HMGN1P18-201ENST00000457642 A0A087WVE0 104 aa2.28□□□□□ -2.04
HMGN1P18-201ENST00000457642 A0A0J9YWU9 116 aa2.28□□□□□ -2.04
HMGN1P18-201ENST00000457642 TRBV7-6A0A0J9YX20 115 aa2.28□□□□□ -2.04
HMGN1P18-201ENST00000457642 F8WDY8 70 aa2.28□□□□□ -2.04
HMGN1P18-201ENST00000457642 IGHV4-30-4P0DP06 118 aa2.28□□□□□ -2.04
HMGN1P18-201ENST00000457642 PLA2G2AP14555 144 aa2.28□□□□□ -2.04
HMGN1P18-201ENST00000457642 CXCL6P80162 114 aa2.28□□□□□ -2.04
HMGN1P18-201ENST00000457642 ENHOQ6UWT2 76 aa2.28□□□□□ -2.04
HMGN1P18-201ENST00000457642 Q6ZQT0 140 aa2.28□□□□□ -2.04
HMGN1P18-201ENST00000457642 C2orf48Q96LS8 159 aa2.28□□□□□ -2.04
HMGN1P18-201ENST00000457642 CAMK2N2Q96S95 79 aa2.28□□□□□ -2.04
HMGN1P18-201ENST00000457642 LRRK2Q5S007 2527 aa2.28□□□□□ -2.04
HMGN1P18-201ENST00000457642 NOTCH3Q9UM47 2321 aa2.28□□□□□ -2.05
HMGN1P18-201ENST00000457642 DCHS1Q96JQ0 3298 aa2.27□□□□□ -2.05
HMGN1P18-201ENST00000457642 ZNF462Q96JM2 2506 aa2.27□□□□□ -2.05
HMGN1P18-201ENST00000457642 C2CD3Q4AC94 2353 aa2.27□□□□□ -2.05
HMGN1P18-201ENST00000457642 TRAV7A0A075B6U4 112 aa2.27□□□□□ -2.05
HMGN1P18-201ENST00000457642 LOC107984640A0A0U1RRK4 108 aa2.27□□□□□ -2.05
HMGN1P18-201ENST00000457642 FAM236DA0A1B0GTK5 79 aa2.27□□□□□ -2.05
HMGN1P18-201ENST00000457642 CYSRT1A8MQ03 144 aa2.27□□□□□ -2.05
HMGN1P18-201ENST00000457642 J3QKU1 62 aa2.27□□□□□ -2.05
HMGN1P18-201ENST00000457642 M0R378 163 aa2.27□□□□□ -2.05
HMGN1P18-201ENST00000457642 DEFB4AO15263 64 aa2.27□□□□□ -2.05
HMGN1P18-201ENST00000457642 ZNF73O43830 326 aaPredicted RBP2.27□□□□□ -2.05
HMGN1P18-201ENST00000457642 IGLV6-57P01721 117 aa2.27□□□□□ -2.05
HMGN1P18-201ENST00000457642 FAM236CP0DP71 79 aa2.27□□□□□ -2.05
HMGN1P18-201ENST00000457642 NANOS2P60321 138 aaKnown RBP2.27□□□□□ -2.05
HMGN1P18-201ENST00000457642 PRR3P79522 188 aaKnown RBP2.27□□□□□ -2.05
HMGN1P18-201ENST00000457642 HAMPP81172 84 aa2.27□□□□□ -2.05
HMGN1P18-201ENST00000457642 KRTAP1-1Q07627 177 aa2.27□□□□□ -2.05
HMGN1P18-201ENST00000457642 EGFEM1PQ0D2K5 195 aa2.27□□□□□ -2.05
HMGN1P18-201ENST00000457642 C9orf116Q5BN46 136 aaPredicted RBP2.27□□□□□ -2.05
HMGN1P18-201ENST00000457642 C9orf129Q5T035 196 aaKnown RBP2.27□□□□□ -2.05
HMGN1P18-201ENST00000457642 LYPD5Q6UWN5 251 aa2.27□□□□□ -2.05
HMGN1P18-201ENST00000457642 UNQ6190/PRO20217Q6UXQ8 127 aa2.27□□□□□ -2.05
HMGN1P18-201ENST00000457642 Q6ZQY7 126 aa2.27□□□□□ -2.05
HMGN1P18-201ENST00000457642 KLK12Q9UKR0 248 aa2.27□□□□□ -2.05
HMGN1P18-201ENST00000457642 ITPR1Q14643 2758 aa2.27□□□□□ -2.05
HMGN1P18-201ENST00000457642 POLQO75417 2590 aa2.27□□□□□ -2.05
HMGN1P18-201ENST00000457642 TLN2Q9Y4G6 2542 aa2.27□□□□□ -2.05
HMGN1P18-201ENST00000457642 IGSF10Q6WRI0 2623 aa2.26□□□□□ -2.05
HMGN1P18-201ENST00000457642 CSMD1Q96PZ7 3565 aa2.26□□□□□ -2.05
HMGN1P18-201ENST00000457642 H3BNG1 76 aa2.26□□□□□ -2.05
HMGN1P18-201ENST00000457642 NDUFC1O43677 76 aa2.26□□□□□ -2.05
HMGN1P18-201ENST00000457642 ATP5EP56381 51 aaPredicted RBP2.26□□□□□ -2.05
HMGN1P18-201ENST00000457642 LINC01547P58512 204 aaPredicted RBP2.26□□□□□ -2.05
HMGN1P18-201ENST00000457642 ELOF1P60002 83 aaKnown RBP2.26□□□□□ -2.05
HMGN1P18-201ENST00000457642 C5orf47Q569G3 176 aa2.26□□□□□ -2.05
HMGN1P18-201ENST00000457642 Q6ZVQ6 151 aa2.26□□□□□ -2.05
HMGN1P18-201ENST00000457642 NKAPP1Q8N9T2 125 aa2.26□□□□□ -2.05
HMGN1P18-201ENST00000457642 Q8NAQ8 132 aa2.26□□□□□ -2.05
HMGN1P18-201ENST00000457642 DPH3Q96FX2 82 aa2.26□□□□□ -2.05
HMGN1P18-201ENST00000457642 C1orf43Q9BWL3 253 aa2.26□□□□□ -2.05
HMGN1P18-201ENST00000457642 PRR34Q9NV39 138 aa2.26□□□□□ -2.05
HMGN1P18-201ENST00000457642 SONP18583 2426 aaKnown RBP2.26□□□□□ -2.05
HMGN1P18-201ENST00000457642 FLNCQ14315 2725 aa2.25□□□□□ -2.05
HMGN1P18-201ENST00000457642 CFAP46Q8IYW2 2715 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms