RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 BAALC-AS2P0C853 105 aa8.69□□□□□ -1.02
LINC00959-201ENST00000456581 PFN2P35080 140 aa8.69□□□□□ -1.02
LINC00959-201ENST00000456581 TRGV4A0A0C4DH28 118 aa8.68□□□□□ -1.02
LINC00959-201ENST00000456581 ANK2Q01484 3957 aa8.68□□□□□ -1.02
LINC00959-201ENST00000456581 IGKV2-28A0A075B6P5 120 aa8.68□□□□□ -1.02
LINC00959-201ENST00000456581 IGKV2D-28P01615 120 aa8.68□□□□□ -1.02
LINC00959-201ENST00000456581 C5orf38Q86SI9 138 aa8.68□□□□□ -1.02
LINC00959-201ENST00000456581 KLK5Q9Y337 293 aaPredicted RBP8.68□□□□□ -1.02
LINC00959-201ENST00000456581 CLPSL2Q6UWE3 100 aa8.67□□□□□ -1.02
LINC00959-201ENST00000456581 A0A087WYN8 130 aa8.67□□□□□ -1.02
LINC00959-201ENST00000456581 TRBV10-1A0A0K0K1A3 114 aa8.67□□□□□ -1.02
LINC00959-201ENST00000456581 DEFB121Q5J5C9 76 aa8.67□□□□□ -1.02
LINC00959-201ENST00000456581 TMEM243Q9BU79 118 aa8.67□□□□□ -1.02
LINC00959-201ENST00000456581 SLPIP03973 132 aa8.67□□□□□ -1.02
LINC00959-201ENST00000456581 TENM3Q9P273 2699 aa8.66□□□□□ -1.02
LINC00959-201ENST00000456581 A0A096LPF7 62 aa8.66□□□□□ -1.02
LINC00959-201ENST00000456581 LINC00158P58513 81 aa8.66□□□□□ -1.02
LINC00959-201ENST00000456581 DEFB135Q30KP9 77 aa8.66□□□□□ -1.02
LINC00959-201ENST00000456581 NBEAL1Q6ZS30 2694 aa8.65□□□□□ -1.02
LINC00959-201ENST00000456581 GAGE2AQ6NT46 116 aa8.65□□□□□ -1.02
LINC00959-201ENST00000456581 OVOL2Q9BRP0 275 aa8.65□□□□□ -1.02
LINC00959-201ENST00000456581 COX7B2Q8TF08 81 aa8.65□□□□□ -1.03
LINC00959-201ENST00000456581 SND1-IT1Q9HBX3 110 aa8.65□□□□□ -1.03
LINC00959-201ENST00000456581 C9orf66Q5T8R8 295 aa8.64□□□□□ -1.03
LINC00959-201ENST00000456581 X6R8D5 127 aa8.64□□□□□ -1.03
LINC00959-201ENST00000456581 FHL2Q14192 279 aa8.64□□□□□ -1.03
LINC00959-201ENST00000456581 CYSTM1Q9H1C7 97 aa8.64□□□□□ -1.03
LINC00959-201ENST00000456581 CSDC2Q9Y534 153 aaKnown RBP8.64□□□□□ -1.03
LINC00959-201ENST00000456581 PRR3P79522 188 aaKnown RBP8.63□□□□□ -1.03
LINC00959-201ENST00000456581 MRPL23Q16540 153 aaKnown RBP8.63□□□□□ -1.03
LINC00959-201ENST00000456581 SMIM11BQ8TCY0 68 aa8.63□□□□□ -1.03
LINC00959-201ENST00000456581 FAM240AA0A1B0GVK7 77 aa8.63□□□□□ -1.03
LINC00959-201ENST00000456581 CRPP02741 224 aa8.63□□□□□ -1.03
LINC00959-201ENST00000456581 CCL18P55774 89 aa8.62□□□□□ -1.03
LINC00959-201ENST00000456581 FAM19A3Q7Z5A8 133 aa8.62□□□□□ -1.03
LINC00959-201ENST00000456581 C14orf132Q9NPU4 83 aa8.62□□□□□ -1.03
LINC00959-201ENST00000456581 TRBV6-4A0A1B0GX49 114 aa8.62□□□□□ -1.03
LINC00959-201ENST00000456581 SDIM1Q6ZPB5 146 aa8.62□□□□□ -1.03
LINC00959-201ENST00000456581 TRBV7-7A0A0K0K1E9 115 aa8.61□□□□□ -1.03
LINC00959-201ENST00000456581 XCL1P47992 114 aa8.61□□□□□ -1.03
LINC00959-201ENST00000456581 Q8N3U1 123 aa8.61□□□□□ -1.03
LINC00959-201ENST00000456581 OR13C6PQ8NH95 151 aa8.61□□□□□ -1.03
LINC00959-201ENST00000456581 A0A087WVE0 104 aa8.6□□□□□ -1.03
LINC00959-201ENST00000456581 IGKV3D-7A0A0C4DH55 119 aa8.6□□□□□ -1.03
LINC00959-201ENST00000456581 OXLD1Q5BKU9 147 aa8.6□□□□□ -1.03
LINC00959-201ENST00000456581 IGHV3OR16-9A0A0B4J2B5 98 aa8.6□□□□□ -1.03
LINC00959-201ENST00000456581 TRACP01848 142 aa8.6□□□□□ -1.03
LINC00959-201ENST00000456581 MALP21145 153 aa8.6□□□□□ -1.03
LINC00959-201ENST00000456581 FAM222AQ5U5X8 452 aa8.6□□□□□ -1.03
LINC00959-201ENST00000456581 LOC107984640A0A0U1RRK4 108 aa8.59□□□□□ -1.03
LINC00959-201ENST00000456581 NCR3O14931 201 aa8.59□□□□□ -1.03
LINC00959-201ENST00000456581 PAX4O43316 350 aa8.59□□□□□ -1.03
LINC00959-201ENST00000456581 PPDPFQ9H3Y8 114 aa8.59□□□□□ -1.03
LINC00959-201ENST00000456581 TRBV6-8A0A0A6YYG3 113 aa8.59□□□□□ -1.03
LINC00959-201ENST00000456581 LECT2O14960 151 aa8.59□□□□□ -1.03
LINC00959-201ENST00000456581 CMYA5Q8N3K9 4069 aa8.59□□□□□ -1.04
LINC00959-201ENST00000456581 TMEM126AQ9H061 195 aa8.58□□□□□ -1.04
LINC00959-201ENST00000456581 MGAM2Q2M2H8 2515 aa8.58□□□□□ -1.04
LINC00959-201ENST00000456581 RPL28P46779 137 aaKnown RBP8.58□□□□□ -1.04
LINC00959-201ENST00000456581 KRTAP24-1Q3LI83 254 aa8.58□□□□□ -1.04
LINC00959-201ENST00000456581 TRAV13-2A0A0B4J235 113 aa8.57□□□□□ -1.04
LINC00959-201ENST00000456581 GYPEP15421 78 aa8.57□□□□□ -1.04
LINC00959-201ENST00000456581 CELA1Q9UNI1 258 aa8.57□□□□□ -1.04
LINC00959-201ENST00000456581 KIR2DL5BQ8NHK3 375 aa8.57□□□□□ -1.04
LINC00959-201ENST00000456581 IGHV4-28A0A0C4DH34 117 aa8.56□□□□□ -1.04
LINC00959-201ENST00000456581 DNAL4O96015 105 aa8.56□□□□□ -1.04
LINC00959-201ENST00000456581 COPS9Q8WXC6 57 aa8.56□□□□□ -1.04
LINC00959-201ENST00000456581 IGLV10-54A0A075B6I4 117 aa8.56□□□□□ -1.04
LINC00959-201ENST00000456581 IGHV4-30-4P0DP06 118 aa8.56□□□□□ -1.04
LINC00959-201ENST00000456581 C9orf153Q5TBE3 101 aa8.56□□□□□ -1.04
LINC00959-201ENST00000456581 WFDC9Q8NEX5 89 aa8.56□□□□□ -1.04
LINC00959-201ENST00000456581 LINC00846Q9NV44 126 aa8.56□□□□□ -1.04
LINC00959-201ENST00000456581 LINC00959A0A1B0GUT2 108 aa8.55□□□□□ -1.04
LINC00959-201ENST00000456581 C9orf116Q5BN46 136 aaPredicted RBP8.55□□□□□ -1.04
LINC00959-201ENST00000456581 C6orf226Q5I0X4 101 aa8.55□□□□□ -1.04
LINC00959-201ENST00000456581 LINC00643Q86TS7 51 aa8.55□□□□□ -1.04
LINC00959-201ENST00000456581 LINC00612Q8N6U2 182 aa8.55□□□□□ -1.04
LINC00959-201ENST00000456581 A0A087WZ39 114 aa8.54□□□□□ -1.04
LINC00959-201ENST00000456581 SMIM9A6NGZ8 99 aa8.53□□□□□ -1.04
LINC00959-201ENST00000456581 ACYP1P07311 99 aa8.53□□□□□ -1.04
LINC00959-201ENST00000456581 HTN3P15516 51 aa8.53□□□□□ -1.04
LINC00959-201ENST00000456581 KRTAP10-11P60412 298 aa8.53□□□□□ -1.04
LINC00959-201ENST00000456581 LINC00526Q96FQ7 95 aa8.53□□□□□ -1.04
LINC00959-201ENST00000456581 APOC4P55056 127 aa8.52□□□□□ -1.05
LINC00959-201ENST00000456581 SS18Q15532 418 aa8.52□□□□□ -1.05
LINC00959-201ENST00000456581 Q8NDZ9 215 aa8.52□□□□□ -1.05
LINC00959-201ENST00000456581 IMUPQ9GZP8 106 aa8.52□□□□□ -1.05
LINC00959-201ENST00000456581 RETNQ9HD89 108 aa8.52□□□□□ -1.05
LINC00959-201ENST00000456581 PRO0255Q9UI72 69 aa8.52□□□□□ -1.05
LINC00959-201ENST00000456581 Q8NAQ8 132 aa8.52□□□□□ -1.05
LINC00959-201ENST00000456581 C2orf48Q96LS8 159 aa8.52□□□□□ -1.05
LINC00959-201ENST00000456581 hADV29S1A0JD25 119 aa8.51□□□□□ -1.05
LINC00959-201ENST00000456581 IBA57-AS1B1ANH7 110 aa8.5□□□□□ -1.05
LINC00959-201ENST00000456581 DAD1P61803 113 aa8.5□□□□□ -1.05
LINC00959-201ENST00000456581 INAFM2P0DMQ5 153 aa8.5□□□□□ -1.05
LINC00959-201ENST00000456581 CXCL5P42830 114 aa8.5□□□□□ -1.05
LINC00959-201ENST00000456581 C3orf22Q8N5N4 141 aa8.5□□□□□ -1.05
LINC00959-201ENST00000456581 LYRM9A8MSI8 78 aa8.49□□□□□ -1.05
LINC00959-201ENST00000456581 LINC00269Q8N2A0 174 aa8.49□□□□□ -1.05
LINC00959-201ENST00000456581 NANOS2P60321 138 aaKnown RBP8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms