RNA–Protein interactions for RNA: ENST00000455554.2

LINC02540-201, Transcript of long intergenic non-protein coding RNA 2540, humanhuman

TSL 3 BASIC

Gene LINC02540, Length 570 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02540-201ENST00000455554 TFF1P04155 84 aa1.23□□□□□ -2.21
LINC02540-201ENST00000455554 C10orf128Q5T292 105 aa1.23□□□□□ -2.21
LINC02540-201ENST00000455554 LYPD1Q8N2G4 141 aa1.23□□□□□ -2.21
LINC02540-201ENST00000455554 FDCSPQ8NFU4 85 aa1.23□□□□□ -2.21
LINC02540-201ENST00000455554 RETNLBQ9BQ08 111 aa1.23□□□□□ -2.21
LINC02540-201ENST00000455554 MRPL36Q9P0J6 103 aaKnown RBP1.23□□□□□ -2.21
LINC02540-201ENST00000455554 F5P12259 2224 aa1.23□□□□□ -2.21
LINC02540-201ENST00000455554 SORL1Q92673 2214 aa1.23□□□□□ -2.21
LINC02540-201ENST00000455554 COL4A5P29400 1685 aa1.23□□□□□ -2.21
LINC02540-201ENST00000455554 PTPRQQ9UMZ3 2332 aa1.22□□□□□ -2.21
LINC02540-201ENST00000455554 SDK1Q7Z5N4 2213 aa1.22□□□□□ -2.21
LINC02540-201ENST00000455554 IGKV1D-37A0A075B6S9 117 aa1.22□□□□□ -2.21
LINC02540-201ENST00000455554 LCE6AA0A183 80 aa1.22□□□□□ -2.21
LINC02540-201ENST00000455554 CXorf51AA0A1B0GTR3 108 aa1.22□□□□□ -2.21
LINC02540-201ENST00000455554 A0A1B0GW54 56 aa1.22□□□□□ -2.21
LINC02540-201ENST00000455554 NCR3O14931 201 aa1.22□□□□□ -2.21
LINC02540-201ENST00000455554 IGHV1-69P01742 117 aa1.22□□□□□ -2.21
LINC02540-201ENST00000455554 SAA2P0DJI9 122 aaPredicted RBP1.22□□□□□ -2.21
LINC02540-201ENST00000455554 IGHV3-30-3P0DP02 117 aa1.22□□□□□ -2.21
LINC02540-201ENST00000455554 CCL5P13501 91 aa1.22□□□□□ -2.21
LINC02540-201ENST00000455554 RPL27AP46776 148 aaKnown RBP1.22□□□□□ -2.21
LINC02540-201ENST00000455554 LINC00315P59091 139 aa1.22□□□□□ -2.21
LINC02540-201ENST00000455554 ELOF1P60002 83 aaKnown RBP1.22□□□□□ -2.21
LINC02540-201ENST00000455554 PRCDQ00LT1 54 aa1.22□□□□□ -2.21
LINC02540-201ENST00000455554 PDE6HQ13956 83 aa1.22□□□□□ -2.21
LINC02540-201ENST00000455554 DEFB134Q4QY38 66 aa1.22□□□□□ -2.21
LINC02540-201ENST00000455554 CASC2Q6XLA1 102 aa1.22□□□□□ -2.21
LINC02540-201ENST00000455554 MIR7-3HGQ8N6C7 128 aa1.22□□□□□ -2.21
LINC02540-201ENST00000455554 Q8N814 137 aa1.22□□□□□ -2.21
LINC02540-201ENST00000455554 LINC00308Q8TCZ7 52 aa1.22□□□□□ -2.21
LINC02540-201ENST00000455554 ZCCHC13Q8WW36 166 aaKnown RBP1.22□□□□□ -2.21
LINC02540-201ENST00000455554 PRR15LQ9BU68 103 aa1.22□□□□□ -2.21
LINC02540-201ENST00000455554 HIGD2AQ9BW72 106 aa1.22□□□□□ -2.21
LINC02540-201ENST00000455554 ORMDL1Q9P0S3 153 aa1.22□□□□□ -2.21
LINC02540-201ENST00000455554 S4R3C0 116 aa1.22□□□□□ -2.21
LINC02540-201ENST00000455554 KNL1Q8NG31 2342 aa1.22□□□□□ -2.21
LINC02540-201ENST00000455554 TNRC6BQ9UPQ9 1833 aaKnown RBP1.22□□□□□ -2.21
LINC02540-201ENST00000455554 LOC110117498A0A087WWA1 95 aa1.21□□□□□ -2.22
LINC02540-201ENST00000455554 TRBV10-1A0A0K0K1A3 114 aa1.21□□□□□ -2.22
LINC02540-201ENST00000455554 TRBV6-5A0A0K0K1A5 114 aa1.21□□□□□ -2.22
LINC02540-201ENST00000455554 IGKV2-29A2NJV5 120 aaPredicted RBP1.21□□□□□ -2.22
LINC02540-201ENST00000455554 HAMPP81172 84 aa1.21□□□□□ -2.22
LINC02540-201ENST00000455554 ERHP84090 104 aaKnown RBP1.21□□□□□ -2.22
LINC02540-201ENST00000455554 NNATQ16517 81 aa1.21□□□□□ -2.22
LINC02540-201ENST00000455554 C1orf134Q5TEV5 83 aa1.21□□□□□ -2.22
LINC02540-201ENST00000455554 FAM27BQ5VT28 67 aa1.21□□□□□ -2.22
LINC02540-201ENST00000455554 ADM2Q7Z4H4 148 aa1.21□□□□□ -2.22
LINC02540-201ENST00000455554 TMEM105Q8N8V8 129 aa1.21□□□□□ -2.22
LINC02540-201ENST00000455554 SPANXA2-OT1Q8N9U9 137 aa1.21□□□□□ -2.22
LINC02540-201ENST00000455554 B9D2Q9BPU9 175 aa1.21□□□□□ -2.22
LINC02540-201ENST00000455554 Q9BRP9 147 aa1.21□□□□□ -2.22
LINC02540-201ENST00000455554 NDUFA4L2Q9NRX3 87 aa1.21□□□□□ -2.22
LINC02540-201ENST00000455554 RP1P56715 2156 aa1.21□□□□□ -2.22
LINC02540-201ENST00000455554 MALRD1Q5VYJ5 2156 aa1.21□□□□□ -2.22
LINC02540-201ENST00000455554 MUC22E2RYF6 1773 aaPredicted RBP1.21□□□□□ -2.22
LINC02540-201ENST00000455554 URB1O60287 2271 aaKnown RBP1.2□□□□□ -2.22
LINC02540-201ENST00000455554 ABCA4P78363 2273 aa1.2□□□□□ -2.22
LINC02540-201ENST00000455554 IGHV3-64A0A075B6Q5 118 aa1.2□□□□□ -2.22
LINC02540-201ENST00000455554 IGHV3OR16-8A0A075B7F1 116 aa1.2□□□□□ -2.22
LINC02540-201ENST00000455554 IGHV1-18A0A0C4DH31 117 aa1.2□□□□□ -2.22
LINC02540-201ENST00000455554 NDUFA1O15239 70 aa1.2□□□□□ -2.22
LINC02540-201ENST00000455554 IGHV1-46P01743 117 aa1.2□□□□□ -2.22
LINC02540-201ENST00000455554 CLPSP04118 112 aa1.2□□□□□ -2.22
LINC02540-201ENST00000455554 CCL3P10147 92 aa1.2□□□□□ -2.22
LINC02540-201ENST00000455554 PDE6GP18545 87 aa1.2□□□□□ -2.22
LINC02540-201ENST00000455554 POLR2KP53803 58 aaKnown RBP1.2□□□□□ -2.22
LINC02540-201ENST00000455554 ROMO1P60602 79 aa1.2□□□□□ -2.22
LINC02540-201ENST00000455554 RPL39P62891 51 aaKnown RBP1.2□□□□□ -2.22
LINC02540-201ENST00000455554 FAM74A4Q5TZK3 123 aa1.2□□□□□ -2.22
LINC02540-201ENST00000455554 Q6ZQT0 140 aa1.2□□□□□ -2.22
LINC02540-201ENST00000455554 Q6ZTI0 123 aa1.2□□□□□ -2.22
LINC02540-201ENST00000455554 Q8NAQ8 132 aa1.2□□□□□ -2.22
LINC02540-201ENST00000455554 RPL39LQ96EH5 51 aaKnown RBP1.2□□□□□ -2.22
LINC02540-201ENST00000455554 PLAC8Q9NZF1 115 aa1.2□□□□□ -2.22
LINC02540-201ENST00000455554 LINC01558Q9Y6Z2 57 aa1.2□□□□□ -2.22
LINC02540-201ENST00000455554 ASCC3Q8N3C0 2202 aaKnown RBP1.2□□□□□ -2.22
LINC02540-201ENST00000455554 SEC16AO15027 2179 aa1.2□□□□□ -2.22
LINC02540-201ENST00000455554 ABCA1O95477 2261 aa1.19□□□□□ -2.22
LINC02540-201ENST00000455554 IGKV2D-24A0A075B6R9 120 aa1.19□□□□□ -2.22
LINC02540-201ENST00000455554 IGHV3-73A0A0B4J1V6 119 aa1.19□□□□□ -2.22
LINC02540-201ENST00000455554 IGHV3-43A0A0B4J1X8 118 aa1.19□□□□□ -2.22
LINC02540-201ENST00000455554 A0A1W2PNM2 257 aa1.19□□□□□ -2.22
LINC02540-201ENST00000455554 CLPSL1A2RUU4 121 aa1.19□□□□□ -2.22
LINC02540-201ENST00000455554 H0YGG7 62 aa1.19□□□□□ -2.22
LINC02540-201ENST00000455554 H3BRN7 92 aa1.19□□□□□ -2.22
LINC02540-201ENST00000455554 K7ERS5 55 aa1.19□□□□□ -2.22
LINC02540-201ENST00000455554 LECT2O14960 151 aa1.19□□□□□ -2.22
LINC02540-201ENST00000455554 NDUFB1O75438 58 aa1.19□□□□□ -2.22
LINC02540-201ENST00000455554 CRPP02741 224 aa1.19□□□□□ -2.22
LINC02540-201ENST00000455554 IGKV4-1P06312 121 aa1.19□□□□□ -2.22
LINC02540-201ENST00000455554 CGB3P0DN86 165 aa1.19□□□□□ -2.22
LINC02540-201ENST00000455554 CGB7P0DN87 165 aa1.19□□□□□ -2.22
LINC02540-201ENST00000455554 CNBPP62633 177 aaKnown RBP1.19□□□□□ -2.22
LINC02540-201ENST00000455554 RPL39P5Q59GN2 51 aa1.19□□□□□ -2.22
LINC02540-201ENST00000455554 SMIM11BQ8TCY0 68 aa1.19□□□□□ -2.22
LINC02540-201ENST00000455554 COX14Q96I36 57 aa1.19□□□□□ -2.22
LINC02540-201ENST00000455554 LINC00208Q96KT6 92 aa1.19□□□□□ -2.22
LINC02540-201ENST00000455554 XAGE1AQ9HD64 81 aa1.19□□□□□ -2.22
LINC02540-201ENST00000455554 KLK9Q9UKQ9 250 aa1.19□□□□□ -2.22
LINC02540-201ENST00000455554 CR1P17927 2039 aa1.18□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 128.9 ms