RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 NBDYA0A0U1RRE5 68 aa5.11□□□□□ -1.59
CDC42BPA-208ENST00000442054 LECT2O14960 151 aa5.11□□□□□ -1.59
CDC42BPA-208ENST00000442054 ESRGQ1W209 222 aa5.11□□□□□ -1.59
CDC42BPA-208ENST00000442054 IGHV1-58A0A0C4DH39 117 aa5.11□□□□□ -1.59
CDC42BPA-208ENST00000442054 RS1O15537 224 aa5.11□□□□□ -1.59
CDC42BPA-208ENST00000442054 PPDPFLQ8WWR9 84 aa5.11□□□□□ -1.59
CDC42BPA-208ENST00000442054 PPDPFQ9H3Y8 114 aa5.11□□□□□ -1.59
CDC42BPA-208ENST00000442054 TIMM17BO60830 172 aa5.1□□□□□ -1.59
CDC42BPA-208ENST00000442054 PSMB2P49721 201 aa5.1□□□□□ -1.59
CDC42BPA-208ENST00000442054 HERVK_113P61574 105 aa5.1□□□□□ -1.59
CDC42BPA-208ENST00000442054 FHL2Q14192 279 aa5.1□□□□□ -1.59
CDC42BPA-208ENST00000442054 TRBV10-1A0A0K0K1A3 114 aa5.1□□□□□ -1.59
CDC42BPA-208ENST00000442054 TRIAP1O43715 76 aa5.1□□□□□ -1.59
CDC42BPA-208ENST00000442054 HERV-K104P63124 156 aa5.1□□□□□ -1.59
CDC42BPA-208ENST00000442054 TMEM170BQ5T4T1 132 aa5.1□□□□□ -1.59
CDC42BPA-208ENST00000442054 SCGB1D4Q6XE38 83 aa5.1□□□□□ -1.59
CDC42BPA-208ENST00000442054 SDIM1Q6ZPB5 146 aa5.1□□□□□ -1.59
CDC42BPA-208ENST00000442054 LINC00588Q9Y4M8 146 aa5.1□□□□□ -1.59
CDC42BPA-208ENST00000442054 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.09□□□□□ -1.59
CDC42BPA-208ENST00000442054 PLAC8L1A1L4L8 177 aa5.09□□□□□ -1.59
CDC42BPA-208ENST00000442054 ZNF561-AS1K7EIQ3 104 aa5.09□□□□□ -1.59
CDC42BPA-208ENST00000442054 COX6A2Q02221 97 aa5.09□□□□□ -1.59
CDC42BPA-208ENST00000442054 LELP1Q5T871 98 aa5.09□□□□□ -1.59
CDC42BPA-208ENST00000442054 LINC00336Q6ZUF6 198 aa5.09□□□□□ -1.59
CDC42BPA-208ENST00000442054 TIMM21Q9BVV7 248 aa5.09□□□□□ -1.59
CDC42BPA-208ENST00000442054 SRSF9Q13242 221 aaKnown RBP eCLIP5.09□□□□□ -1.59
CDC42BPA-208ENST00000442054 LYPD5Q6UWN5 251 aa5.09□□□□□ -1.59
CDC42BPA-208ENST00000442054 ERG28Q9UKR5 140 aa5.09□□□□□ -1.59
CDC42BPA-208ENST00000442054 MIAQ16674 131 aa5.09□□□□□ -1.6
CDC42BPA-208ENST00000442054 DAZ4Q86SG3 579 aaKnown RBP5.09□□□□□ -1.6
CDC42BPA-208ENST00000442054 DAZ3Q9NR90 486 aaKnown RBP5.09□□□□□ -1.6
CDC42BPA-208ENST00000442054 TRRAPQ9Y4A5 3859 aa5.08□□□□□ -1.6
CDC42BPA-208ENST00000442054 CKS1BP61024 79 aa5.08□□□□□ -1.6
CDC42BPA-208ENST00000442054 SS18Q15532 418 aa5.08□□□□□ -1.6
CDC42BPA-208ENST00000442054 NTM-AS1Q6ZSK4 140 aa5.08□□□□□ -1.6
CDC42BPA-208ENST00000442054 WFDC10BQ8IUB3 73 aa5.08□□□□□ -1.6
CDC42BPA-208ENST00000442054 SPANXA1Q9NS26 97 aa5.08□□□□□ -1.6
CDC42BPA-208ENST00000442054 DNHD1Q96M86 4753 aa5.08□□□□□ -1.6
CDC42BPA-208ENST00000442054 SFTA2Q6UW10 78 aa5.08□□□□□ -1.6
CDC42BPA-208ENST00000442054 TOMM7Q9P0U1 55 aa5.08□□□□□ -1.6
CDC42BPA-208ENST00000442054 TRAV13-1A0A0B4J241 112 aa5.08□□□□□ -1.6
CDC42BPA-208ENST00000442054 LINC00694P0DN24 101 aa5.08□□□□□ -1.6
CDC42BPA-208ENST00000442054 ZNF625Q96I27 306 aaPredicted RBP5.08□□□□□ -1.6
CDC42BPA-208ENST00000442054 DNAJC30Q96LL9 226 aa5.08□□□□□ -1.6
CDC42BPA-208ENST00000442054 H7C423 109 aa5.07□□□□□ -1.6
CDC42BPA-208ENST00000442054 SOSTDC1Q6X4U4 206 aa5.07□□□□□ -1.6
CDC42BPA-208ENST00000442054 CSDC2Q9Y534 153 aaKnown RBP5.07□□□□□ -1.6
CDC42BPA-208ENST00000442054 NDUFA1O15239 70 aa5.07□□□□□ -1.6
CDC42BPA-208ENST00000442054 SLC25A20O43772 301 aa5.07□□□□□ -1.6
CDC42BPA-208ENST00000442054 LGALS3P17931 250 aaKnown RBP5.07□□□□□ -1.6
CDC42BPA-208ENST00000442054 C14orf177Q52M58 125 aa5.07□□□□□ -1.6
CDC42BPA-208ENST00000442054 GEMIN7Q9H840 131 aaKnown RBP5.07□□□□□ -1.6
CDC42BPA-208ENST00000442054 IGLV5-52A0A0A0MRZ9 124 aa5.06□□□□□ -1.6
CDC42BPA-208ENST00000442054 LINC01620Q4KN68 170 aa5.06□□□□□ -1.6
CDC42BPA-208ENST00000442054 LINC00242Q5T6M2 205 aa5.06□□□□□ -1.6
CDC42BPA-208ENST00000442054 LOC107984156A0A0G2JMH3 177 aa5.06□□□□□ -1.6
CDC42BPA-208ENST00000442054 H3BNG1 76 aa5.06□□□□□ -1.6
CDC42BPA-208ENST00000442054 J3QR89 54 aa5.06□□□□□ -1.6
CDC42BPA-208ENST00000442054 PRSS2P07478 247 aa5.06□□□□□ -1.6
CDC42BPA-208ENST00000442054 ARL17AQ8IVW1 177 aa5.06□□□□□ -1.6
CDC42BPA-208ENST00000442054 IGHV3-64A0A075B6Q5 118 aa5.06□□□□□ -1.6
CDC42BPA-208ENST00000442054 TRBV10-2A0A0K0K1G8 114 aa5.06□□□□□ -1.6
CDC42BPA-208ENST00000442054 LST1O00453 97 aa5.06□□□□□ -1.6
CDC42BPA-208ENST00000442054 CDKN2A-AS1Q9UH64 79 aa5.06□□□□□ -1.6
CDC42BPA-208ENST00000442054 RNASE13Q5GAN3 156 aaKnown RBP5.05□□□□□ -1.6
CDC42BPA-208ENST00000442054 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.05□□□□□ -1.6
CDC42BPA-208ENST00000442054 IGKV2-29A2NJV5 120 aaPredicted RBP5.05□□□□□ -1.6
CDC42BPA-208ENST00000442054 SMIM1B2RUZ4 78 aa5.05□□□□□ -1.6
CDC42BPA-208ENST00000442054 XCL1P47992 114 aa5.05□□□□□ -1.6
CDC42BPA-208ENST00000442054 LINC00269Q8N2A0 174 aa5.05□□□□□ -1.6
CDC42BPA-208ENST00000442054 TRBV6-8A0A0A6YYG3 113 aa5.04□□□□□ -1.6
CDC42BPA-208ENST00000442054 LYRM7Q5U5X0 104 aa5.04□□□□□ -1.6
CDC42BPA-208ENST00000442054 NDUFA12Q9UI09 145 aa5.04□□□□□ -1.6
CDC42BPA-208ENST00000442054 TEX49A0A1B0GTD5 131 aa5.04□□□□□ -1.6
CDC42BPA-208ENST00000442054 SPINK8P0C7L1 97 aa5.04□□□□□ -1.6
CDC42BPA-208ENST00000442054 Q6Q795 121 aa5.04□□□□□ -1.6
CDC42BPA-208ENST00000442054 C9JAW5 83 aa5.03□□□□□ -1.6
CDC42BPA-208ENST00000442054 TNP2Q05952 138 aa5.03□□□□□ -1.6
CDC42BPA-208ENST00000442054 ATXN8Q156A1 80 aa5.03□□□□□ -1.6
CDC42BPA-208ENST00000442054 IFITM1P13164 125 aa5.03□□□□□ -1.6
CDC42BPA-208ENST00000442054 REG3AQ06141 175 aa5.03□□□□□ -1.6
CDC42BPA-208ENST00000442054 LINC00308Q8TCZ7 52 aa5.03□□□□□ -1.6
CDC42BPA-208ENST00000442054 CDC42SE2Q9NRR3 84 aa5.03□□□□□ -1.6
CDC42BPA-208ENST00000442054 FAM240AA0A1B0GVK7 77 aa5.02□□□□□ -1.61
CDC42BPA-208ENST00000442054 H3BT86 120 aa5.02□□□□□ -1.61
CDC42BPA-208ENST00000442054 NTN5Q8WTR8 489 aaPredicted RBP5.02□□□□□ -1.61
CDC42BPA-208ENST00000442054 IGKV2-24A0A0C4DH68 120 aa5.01□□□□□ -1.61
CDC42BPA-208ENST00000442054 SS18L2Q9UHA2 77 aa5.01□□□□□ -1.61
CDC42BPA-208ENST00000442054 CLEC2BQ92478 149 aa5.01□□□□□ -1.61
CDC42BPA-208ENST00000442054 IGKV2-28A0A075B6P5 120 aa5□□□□□ -1.61
CDC42BPA-208ENST00000442054 IGKV2D-28P01615 120 aa5□□□□□ -1.61
CDC42BPA-208ENST00000442054 FAM218AQ96MZ4 157 aa5□□□□□ -1.61
CDC42BPA-208ENST00000442054 MEGF8Q7Z7M0 2845 aa5□□□□□ -1.61
CDC42BPA-208ENST00000442054 HIGD2BQ4VC39 106 aa5□□□□□ -1.61
CDC42BPA-208ENST00000442054 LINC01556Q5JQF7 62 aa5□□□□□ -1.61
CDC42BPA-208ENST00000442054 C5orf38Q86SI9 138 aa5□□□□□ -1.61
CDC42BPA-208ENST00000442054 DAND5Q8N907 189 aa5□□□□□ -1.61
CDC42BPA-208ENST00000442054 C5orf47Q569G3 176 aa5□□□□□ -1.61
CDC42BPA-208ENST00000442054 C6orf226Q5I0X4 101 aa5□□□□□ -1.61
CDC42BPA-208ENST00000442054 LINC00612Q8N6U2 182 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms