RNA–Protein interactions for RNA: ENST00000417268.3

SCAF8-203, Transcript of SR-related CTD associated factor 8, humanhuman

TSL 2 BASIC

Gene SCAF8, Length 4,944 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-203ENST00000417268 Q6ZQY7 126 aa9.19□□□□□ -0.94
SCAF8-203ENST00000417268 CSDC2Q9Y534 153 aaKnown RBP9.19□□□□□ -0.94
SCAF8-203ENST00000417268 COL27A1Q8IZC6 1860 aaPredicted RBP9.19□□□□□ -0.94
SCAF8-203ENST00000417268 LOC100131303A0A0U1RQF7 123 aa9.18□□□□□ -0.94
SCAF8-203ENST00000417268 BEAN1Q3B7T3 259 aa9.18□□□□□ -0.94
SCAF8-203ENST00000417268 NDUFB1O75438 58 aa9.18□□□□□ -0.94
SCAF8-203ENST00000417268 LINC00242Q5T6M2 205 aa9.18□□□□□ -0.94
SCAF8-203ENST00000417268 RETNQ9HD89 108 aa9.18□□□□□ -0.94
SCAF8-203ENST00000417268 MRPL55Q7Z7F7 128 aaKnown RBP9.18□□□□□ -0.94
SCAF8-203ENST00000417268 CCKP06307 115 aa9.17□□□□□ -0.94
SCAF8-203ENST00000417268 XAGE1AQ9HD64 81 aa9.17□□□□□ -0.94
SCAF8-203ENST00000417268 C1orf195Q5TG92 126 aa9.17□□□□□ -0.94
SCAF8-203ENST00000417268 FAM19A3Q7Z5A8 133 aa9.17□□□□□ -0.94
SCAF8-203ENST00000417268 CENPEQ02224 2701 aa9.16□□□□□ -0.94
SCAF8-203ENST00000417268 TRBV7-7A0A0K0K1E9 115 aa9.15□□□□□ -0.94
SCAF8-203ENST00000417268 CFAP46Q8IYW2 2715 aa9.15□□□□□ -0.94
SCAF8-203ENST00000417268 RPL28P46779 137 aaKnown RBP9.15□□□□□ -0.94
SCAF8-203ENST00000417268 SERP1Q9Y6X1 66 aa9.15□□□□□ -0.94
SCAF8-203ENST00000417268 SMIM1B2RUZ4 78 aa9.15□□□□□ -0.95
SCAF8-203ENST00000417268 KLK9Q2XQG4 91 aa9.15□□□□□ -0.95
SCAF8-203ENST00000417268 C3orf84H3BNL1 204 aa9.14□□□□□ -0.95
SCAF8-203ENST00000417268 USP24Q9UPU5 2620 aa9.14□□□□□ -0.95
SCAF8-203ENST00000417268 TRAV7A0A075B6U4 112 aa9.14□□□□□ -0.95
SCAF8-203ENST00000417268 CDC42SE2Q9NRR3 84 aa9.14□□□□□ -0.95
SCAF8-203ENST00000417268 A0A087WYN8 130 aa9.14□□□□□ -0.95
SCAF8-203ENST00000417268 AMELXQ99217 191 aa9.13□□□□□ -0.95
SCAF8-203ENST00000417268 UNC80Q8N2C7 3258 aa9.13□□□□□ -0.95
SCAF8-203ENST00000417268 CHKB-CPT1BH3BT56 60 aa9.13□□□□□ -0.95
SCAF8-203ENST00000417268 NUPR2A6NF83 97 aa9.13□□□□□ -0.95
SCAF8-203ENST00000417268 COX6A2Q02221 97 aa9.13□□□□□ -0.95
SCAF8-203ENST00000417268 LINC01546A6NGU7 62 aa9.12□□□□□ -0.95
SCAF8-203ENST00000417268 PRR4Q16378 134 aa9.12□□□□□ -0.95
SCAF8-203ENST00000417268 CD164L2Q6UWJ8 174 aa9.12□□□□□ -0.95
SCAF8-203ENST00000417268 NTM-AS1Q6ZSK4 140 aa9.12□□□□□ -0.95
SCAF8-203ENST00000417268 Q6ZTC4 211 aa9.12□□□□□ -0.95
SCAF8-203ENST00000417268 CHCHD7Q9BUK0 85 aa9.11□□□□□ -0.95
SCAF8-203ENST00000417268 MGAQ8IWI9 3026 aa9.11□□□□□ -0.95
SCAF8-203ENST00000417268 FLNAP21333 2647 aaKnown RBP9.11□□□□□ -0.95
SCAF8-203ENST00000417268 LINC00959A0A1B0GUT2 108 aa9.11□□□□□ -0.95
SCAF8-203ENST00000417268 SOSTDC1Q6X4U4 206 aa9.11□□□□□ -0.95
SCAF8-203ENST00000417268 TRIOO75962 3097 aa9.11□□□□□ -0.95
SCAF8-203ENST00000417268 H0Y9J4 135 aa9.1□□□□□ -0.95
SCAF8-203ENST00000417268 FHL2Q14192 279 aa9.1□□□□□ -0.95
SCAF8-203ENST00000417268 LINC00846Q9NV44 126 aa9.1□□□□□ -0.95
SCAF8-203ENST00000417268 IGKV2-24A0A0C4DH68 120 aa9.1□□□□□ -0.95
SCAF8-203ENST00000417268 NHLRC4P0CG21 123 aaPredicted RBP9.1□□□□□ -0.95
SCAF8-203ENST00000417268 ITPR3Q14573 2671 aa9.09□□□□□ -0.95
SCAF8-203ENST00000417268 SYCNQ0VAF6 134 aa9.09□□□□□ -0.95
SCAF8-203ENST00000417268 FAM19A1Q7Z5A9 133 aa9.08□□□□□ -0.96
SCAF8-203ENST00000417268 Q8N814 137 aa9.08□□□□□ -0.96
SCAF8-203ENST00000417268 LY6G6CO95867 125 aa9.08□□□□□ -0.96
SCAF8-203ENST00000417268 UBE2AP49459 152 aa9.07□□□□□ -0.96
SCAF8-203ENST00000417268 KRTAP1-3Q8IUG1 177 aa9.07□□□□□ -0.96
SCAF8-203ENST00000417268 CDH23Q9H251 3354 aa9.06□□□□□ -0.96
SCAF8-203ENST00000417268 LRCOL1A6NCL2 159 aa9.06□□□□□ -0.96
SCAF8-203ENST00000417268 WFDC10BQ8IUB3 73 aa9.06□□□□□ -0.96
SCAF8-203ENST00000417268 SBSPONQ8IVN8 264 aa9.06□□□□□ -0.96
SCAF8-203ENST00000417268 KIF25-AS1Q9Y6Z4 181 aa9.06□□□□□ -0.96
SCAF8-203ENST00000417268 PRR3P79522 188 aaKnown RBP9.05□□□□□ -0.96
SCAF8-203ENST00000417268 HIGD2AQ9BW72 106 aa9.05□□□□□ -0.96
SCAF8-203ENST00000417268 WDFY4Q6ZS81 3184 aa9.05□□□□□ -0.96
SCAF8-203ENST00000417268 M0R2N4 97 aa9.05□□□□□ -0.96
SCAF8-203ENST00000417268 Q8IZM0 81 aa9.05□□□□□ -0.96
SCAF8-203ENST00000417268 Q8N3U1 123 aa9.05□□□□□ -0.96
SCAF8-203ENST00000417268 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.05□□□□□ -0.96
SCAF8-203ENST00000417268 CELA1Q9UNI1 258 aa9.05□□□□□ -0.96
SCAF8-203ENST00000417268 FAM19A4Q96LR4 140 aa9.04□□□□□ -0.96
SCAF8-203ENST00000417268 BPTFQ12830 3046 aa9.04□□□□□ -0.96
SCAF8-203ENST00000417268 CRYGAP11844 174 aa9.04□□□□□ -0.96
SCAF8-203ENST00000417268 C11orf72Q8NBR9 251 aa9.04□□□□□ -0.96
SCAF8-203ENST00000417268 ZNF73O43830 326 aaPredicted RBP9.03□□□□□ -0.96
SCAF8-203ENST00000417268 FAM30AQ9NZY2 134 aa9.03□□□□□ -0.96
SCAF8-203ENST00000417268 COX17Q14061 63 aa9.03□□□□□ -0.96
SCAF8-203ENST00000417268 IGKV4-1P06312 121 aa9.03□□□□□ -0.96
SCAF8-203ENST00000417268 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.03□□□□□ -0.96
SCAF8-203ENST00000417268 WFDC13Q8IUB5 93 aa9.02□□□□□ -0.96
SCAF8-203ENST00000417268 IGKV2-28A0A075B6P5 120 aa9.02□□□□□ -0.97
SCAF8-203ENST00000417268 IGKV2D-28P01615 120 aa9.02□□□□□ -0.97
SCAF8-203ENST00000417268 Q6ZSN1 163 aa9.02□□□□□ -0.97
SCAF8-203ENST00000417268 A0A096LNI7 61 aa9.02□□□□□ -0.97
SCAF8-203ENST00000417268 A6NED7 52 aa9.02□□□□□ -0.97
SCAF8-203ENST00000417268 LINC00337Q8N6G1 96 aa9.02□□□□□ -0.97
SCAF8-203ENST00000417268 DSPP15924 2871 aaKnown RBP9.01□□□□□ -0.97
SCAF8-203ENST00000417268 AKAP13Q12802 2813 aa9.01□□□□□ -0.97
SCAF8-203ENST00000417268 ATRQ13535 2644 aa9.01□□□□□ -0.97
SCAF8-203ENST00000417268 A0A087WZ39 114 aa9.01□□□□□ -0.97
SCAF8-203ENST00000417268 C9orf116Q5BN46 136 aaPredicted RBP9.01□□□□□ -0.97
SCAF8-203ENST00000417268 IGLV4-60A0A075B6I1 120 aa9□□□□□ -0.97
SCAF8-203ENST00000417268 M0R378 163 aa9□□□□□ -0.97
SCAF8-203ENST00000417268 LINC00315P59091 139 aa9□□□□□ -0.97
SCAF8-203ENST00000417268 PRYO14603 147 aa8.99□□□□□ -0.97
SCAF8-203ENST00000417268 RPS28P62857 69 aaKnown RBP8.99□□□□□ -0.97
SCAF8-203ENST00000417268 C4orf26Q17RF5 130 aa8.99□□□□□ -0.97
SCAF8-203ENST00000417268 KRTAP1-1Q07627 177 aa8.98□□□□□ -0.97
SCAF8-203ENST00000417268 MGAM2Q2M2H8 2515 aa8.98□□□□□ -0.97
SCAF8-203ENST00000417268 CYSRT1A8MQ03 144 aa8.98□□□□□ -0.97
SCAF8-203ENST00000417268 UNQ6190/PRO20217Q6UXQ8 127 aa8.98□□□□□ -0.97
SCAF8-203ENST00000417268 PRO0628Q9UI54 55 aa8.98□□□□□ -0.97
SCAF8-203ENST00000417268 LYPD5Q6UWN5 251 aa8.98□□□□□ -0.97
SCAF8-203ENST00000417268 A0A1B0GUV1 79 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms