RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 UBR4Q5T4S7 5183 aa1.14□□□□□ -2.23
HMGB3P31-201ENST00000413333 SSC5DA1L4H1 1573 aa1.14□□□□□ -2.23
HMGB3P31-201ENST00000413333 COL6A5A8TX70 2615 aa1.14□□□□□ -2.23
HMGB3P31-201ENST00000413333 NCOA2Q15596 1464 aa1.14□□□□□ -2.23
HMGB3P31-201ENST00000413333 LRRC9Q6ZRR7 1453 aa1.14□□□□□ -2.23
HMGB3P31-201ENST00000413333 ZNF815PA8K554 130 aa1.14□□□□□ -2.23
HMGB3P31-201ENST00000413333 F8WEM9 126 aa1.14□□□□□ -2.23
HMGB3P31-201ENST00000413333 ACYP2P14621 99 aa1.14□□□□□ -2.23
HMGB3P31-201ENST00000413333 SNRPFP62306 86 aaKnown RBP1.14□□□□□ -2.23
HMGB3P31-201ENST00000413333 ADIRFQ15847 76 aa1.14□□□□□ -2.23
HMGB3P31-201ENST00000413333 CFAP126Q5VTH2 177 aa1.14□□□□□ -2.23
HMGB3P31-201ENST00000413333 SPRR4Q96PI1 79 aa1.14□□□□□ -2.23
HMGB3P31-201ENST00000413333 LRRC37A2A6NM11 1700 aa1.14□□□□□ -2.23
HMGB3P31-201ENST00000413333 IQGAP3Q86VI3 1631 aa1.14□□□□□ -2.23
HMGB3P31-201ENST00000413333 VCANP13611 3396 aa1.14□□□□□ -2.23
HMGB3P31-201ENST00000413333 ZNF292O60281 2723 aa1.14□□□□□ -2.23
HMGB3P31-201ENST00000413333 VWFP04275 2813 aa1.13□□□□□ -2.23
HMGB3P31-201ENST00000413333 FLNCQ14315 2725 aa1.13□□□□□ -2.23
HMGB3P31-201ENST00000413333 MYO5CQ9NQX4 1742 aa1.13□□□□□ -2.23
HMGB3P31-201ENST00000413333 CTXND1A0A1B0GTU2 59 aa1.13□□□□□ -2.23
HMGB3P31-201ENST00000413333 K7EIL1 84 aa1.13□□□□□ -2.23
HMGB3P31-201ENST00000413333 HMGN2P05204 90 aaKnown RBP1.13□□□□□ -2.23
HMGB3P31-201ENST00000413333 IGLC2P0DOY2 106 aa1.13□□□□□ -2.23
HMGB3P31-201ENST00000413333 IGLC3P0DOY3 106 aa1.13□□□□□ -2.23
HMGB3P31-201ENST00000413333 SMIM11AP58511 58 aa1.13□□□□□ -2.23
HMGB3P31-201ENST00000413333 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.13□□□□□ -2.23
HMGB3P31-201ENST00000413333 PLAC4Q8WY50 150 aa1.13□□□□□ -2.23
HMGB3P31-201ENST00000413333 LINC00472Q9H8W2 130 aa1.13□□□□□ -2.23
HMGB3P31-201ENST00000413333 ALKQ9UM73 1620 aa1.13□□□□□ -2.23
HMGB3P31-201ENST00000413333 STAB1Q9NY15 2570 aa1.13□□□□□ -2.23
HMGB3P31-201ENST00000413333 CUX1P39880 1505 aa1.13□□□□□ -2.23
HMGB3P31-201ENST00000413333 LAMA2P24043 3122 aaKnown RBP1.13□□□□□ -2.23
HMGB3P31-201ENST00000413333 FAM208BQ5VWN6 2430 aa1.13□□□□□ -2.23
HMGB3P31-201ENST00000413333 PLXNB2O15031 1838 aa1.12□□□□□ -2.23
HMGB3P31-201ENST00000413333 NHSL1Q5SYE7 1610 aa1.12□□□□□ -2.23
HMGB3P31-201ENST00000413333 PIEZO2Q9H5I5 2752 aa1.12□□□□□ -2.23
HMGB3P31-201ENST00000413333 ARFGEF2Q9Y6D5 1785 aa1.12□□□□□ -2.23
HMGB3P31-201ENST00000413333 ABCC1P33527 1531 aa1.12□□□□□ -2.23
HMGB3P31-201ENST00000413333 MGPP08493 103 aa1.12□□□□□ -2.23
HMGB3P31-201ENST00000413333 ARMS2P0C7Q2 107 aa1.12□□□□□ -2.23
HMGB3P31-201ENST00000413333 RPL37P61927 97 aaKnown RBP1.12□□□□□ -2.23
HMGB3P31-201ENST00000413333 COX17Q14061 63 aa1.12□□□□□ -2.23
HMGB3P31-201ENST00000413333 HMGN3Q15651 99 aa1.12□□□□□ -2.23
HMGB3P31-201ENST00000413333 SPINK13Q1W4C9 94 aa1.12□□□□□ -2.23
HMGB3P31-201ENST00000413333 BVES-AS1Q5T3Y7 98 aa1.12□□□□□ -2.23
HMGB3P31-201ENST00000413333 LINC00643Q86TS7 51 aa1.12□□□□□ -2.23
HMGB3P31-201ENST00000413333 PRR15LQ9BU68 103 aa1.12□□□□□ -2.23
HMGB3P31-201ENST00000413333 PSENENQ9NZ42 101 aa1.12□□□□□ -2.23
HMGB3P31-201ENST00000413333 SPG11Q96JI7 2443 aa1.12□□□□□ -2.23
HMGB3P31-201ENST00000413333 ANKARQ7Z5J8 1434 aa1.12□□□□□ -2.23
HMGB3P31-201ENST00000413333 ATRQ13535 2644 aa1.12□□□□□ -2.23
HMGB3P31-201ENST00000413333 SETBP1Q9Y6X0 1596 aa1.12□□□□□ -2.23
HMGB3P31-201ENST00000413333 KNDC1Q76NI1 1749 aa1.12□□□□□ -2.23
HMGB3P31-201ENST00000413333 NCOR1O75376 2440 aa1.11□□□□□ -2.23
HMGB3P31-201ENST00000413333 CEP250Q9BV73 2442 aa1.11□□□□□ -2.23
HMGB3P31-201ENST00000413333 TARBP1Q13395 1621 aaKnown RBP1.11□□□□□ -2.23
HMGB3P31-201ENST00000413333 PAPPA2Q9BXP8 1791 aa1.11□□□□□ -2.23
HMGB3P31-201ENST00000413333 SZT2Q5T011 3432 aa1.11□□□□□ -2.23
HMGB3P31-201ENST00000413333 BPTFQ12830 3046 aa1.11□□□□□ -2.23
HMGB3P31-201ENST00000413333 WDFY4Q6ZS81 3184 aa1.11□□□□□ -2.23
HMGB3P31-201ENST00000413333 C5P01031 1676 aa1.11□□□□□ -2.23
HMGB3P31-201ENST00000413333 GVQW2A0A096LPI5 108 aaPredicted RBP1.11□□□□□ -2.23
HMGB3P31-201ENST00000413333 A0A1B0GWA3 101 aa1.11□□□□□ -2.23
HMGB3P31-201ENST00000413333 KANTRA0A1W2PQU2 76 aa1.11□□□□□ -2.23
HMGB3P31-201ENST00000413333 C7orf77A4D0Y5 90 aa1.11□□□□□ -2.23
HMGB3P31-201ENST00000413333 M0R3E3 92 aa1.11□□□□□ -2.23
HMGB3P31-201ENST00000413333 LY6G6CO95867 125 aa1.11□□□□□ -2.23
HMGB3P31-201ENST00000413333 ACYP1P07311 99 aa1.11□□□□□ -2.23
HMGB3P31-201ENST00000413333 SPINK9Q5DT21 86 aa1.11□□□□□ -2.23
HMGB3P31-201ENST00000413333 SMIM11BQ8TCY0 68 aa1.11□□□□□ -2.23
HMGB3P31-201ENST00000413333 SMIM4Q8WVI0 70 aa1.11□□□□□ -2.23
HMGB3P31-201ENST00000413333 LINC00846Q9NV44 126 aa1.11□□□□□ -2.23
HMGB3P31-201ENST00000413333 SCN11AQ9UI33 1791 aa1.11□□□□□ -2.23
HMGB3P31-201ENST00000413333 CFAP46Q8IYW2 2715 aa1.1□□□□□ -2.23
HMGB3P31-201ENST00000413333 UGGT2Q9NYU1 1516 aa1.1□□□□□ -2.23
HMGB3P31-201ENST00000413333 TPRP12270 2363 aaKnown RBP1.1□□□□□ -2.23
HMGB3P31-201ENST00000413333 CLIP1P30622 1438 aa1.1□□□□□ -2.23
HMGB3P31-201ENST00000413333 G3V318 75 aa1.1□□□□□ -2.23
HMGB3P31-201ENST00000413333 PLAC8Q9NZF1 115 aa1.1□□□□□ -2.23
HMGB3P31-201ENST00000413333 POLQO75417 2590 aa1.1□□□□□ -2.23
HMGB3P31-201ENST00000413333 CEP295Q9C0D2 2601 aa1.1□□□□□ -2.23
HMGB3P31-201ENST00000413333 SPTAN1Q13813 2472 aaKnown RBP1.1□□□□□ -2.23
HMGB3P31-201ENST00000413333 TTC28Q96AY4 2481 aa1.1□□□□□ -2.23
HMGB3P31-201ENST00000413333 NBEAL2Q6ZNJ1 2754 aa1.09□□□□□ -2.23
HMGB3P31-201ENST00000413333 EYSQ5T1H1 3165 aa1.09□□□□□ -2.23
HMGB3P31-201ENST00000413333 A0A087WVE0 104 aa1.09□□□□□ -2.23
HMGB3P31-201ENST00000413333 IQCF6A8MYZ5 107 aa1.09□□□□□ -2.23
HMGB3P31-201ENST00000413333 FXYD6P3P58550 94 aa1.09□□□□□ -2.23
HMGB3P31-201ENST00000413333 Q6ZRX8 168 aa1.09□□□□□ -2.23
HMGB3P31-201ENST00000413333 SMCO4Q9NRQ5 59 aa1.09□□□□□ -2.23
HMGB3P31-201ENST00000413333 CFAP47Q6ZTR5 3102 aa1.09□□□□□ -2.24
HMGB3P31-201ENST00000413333 CELSR3Q9NYQ7 3312 aa1.09□□□□□ -2.24
HMGB3P31-201ENST00000413333 FCGBPQ9Y6R7 5405 aaPredicted RBP1.09□□□□□ -2.24
HMGB3P31-201ENST00000413333 XRN1Q8IZH2 1706 aaKnown RBP1.09□□□□□ -2.24
HMGB3P31-201ENST00000413333 C1orf167Q5SNV9 1468 aa1.08□□□□□ -2.24
HMGB3P31-201ENST00000413333 H3BUT2 72 aa1.08□□□□□ -2.24
HMGB3P31-201ENST00000413333 C18orf32Q8TCD1 76 aa1.08□□□□□ -2.24
HMGB3P31-201ENST00000413333 PKD1L3Q7Z443 1732 aa1.08□□□□□ -2.24
HMGB3P31-201ENST00000413333 DNAH12Q6ZR08 3092 aa1.07□□□□□ -2.24
HMGB3P31-201ENST00000413333 ITSN1Q15811 1721 aa1.07□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms