RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 UBR4Q5T4S7 5183 aa1.14□□□□□ -2.23
HMGB3P31-201ENST00000413333 SSC5DA1L4H1 1573 aa1.14□□□□□ -2.23
HMGB3P31-201ENST00000413333 COL6A5A8TX70 2615 aa1.14□□□□□ -2.23
HMGB3P31-201ENST00000413333 NCOA2Q15596 1464 aa1.14□□□□□ -2.23
HMGB3P31-201ENST00000413333 LRRC9Q6ZRR7 1453 aa1.14□□□□□ -2.23
HMGB3P31-201ENST00000413333 ZNF815PA8K554 130 aa1.14□□□□□ -2.23
HMGB3P31-201ENST00000413333 F8WEM9 126 aa1.14□□□□□ -2.23
HMGB3P31-201ENST00000413333 ACYP2P14621 99 aa1.14□□□□□ -2.23
HMGB3P31-201ENST00000413333 SNRPFP62306 86 aaKnown RBP1.14□□□□□ -2.23
HMGB3P31-201ENST00000413333 ADIRFQ15847 76 aa1.14□□□□□ -2.23
HMGB3P31-201ENST00000413333 CFAP126Q5VTH2 177 aa1.14□□□□□ -2.23
HMGB3P31-201ENST00000413333 SPRR4Q96PI1 79 aa1.14□□□□□ -2.23
HMGB3P31-201ENST00000413333 LRRC37A2A6NM11 1700 aa1.14□□□□□ -2.23
HMGB3P31-201ENST00000413333 IQGAP3Q86VI3 1631 aa1.14□□□□□ -2.23
HMGB3P31-201ENST00000413333 VCANP13611 3396 aa1.14□□□□□ -2.23
HMGB3P31-201ENST00000413333 ZNF292O60281 2723 aa1.14□□□□□ -2.23
HMGB3P31-201ENST00000413333 VWFP04275 2813 aa1.13□□□□□ -2.23
HMGB3P31-201ENST00000413333 FLNCQ14315 2725 aa1.13□□□□□ -2.23
HMGB3P31-201ENST00000413333 MYO5CQ9NQX4 1742 aa1.13□□□□□ -2.23
HMGB3P31-201ENST00000413333 CTXND1A0A1B0GTU2 59 aa1.13□□□□□ -2.23
HMGB3P31-201ENST00000413333 K7EIL1 84 aa1.13□□□□□ -2.23
HMGB3P31-201ENST00000413333 HMGN2P05204 90 aaKnown RBP1.13□□□□□ -2.23
HMGB3P31-201ENST00000413333 IGLC2P0DOY2 106 aa1.13□□□□□ -2.23
HMGB3P31-201ENST00000413333 IGLC3P0DOY3 106 aa1.13□□□□□ -2.23
HMGB3P31-201ENST00000413333 SMIM11AP58511 58 aa1.13□□□□□ -2.23
HMGB3P31-201ENST00000413333 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.13□□□□□ -2.23
HMGB3P31-201ENST00000413333 PLAC4Q8WY50 150 aa1.13□□□□□ -2.23
HMGB3P31-201ENST00000413333 LINC00472Q9H8W2 130 aa1.13□□□□□ -2.23
HMGB3P31-201ENST00000413333 ALKQ9UM73 1620 aa1.13□□□□□ -2.23
HMGB3P31-201ENST00000413333 STAB1Q9NY15 2570 aa1.13□□□□□ -2.23
HMGB3P31-201ENST00000413333 CUX1P39880 1505 aa1.13□□□□□ -2.23
HMGB3P31-201ENST00000413333 LAMA2P24043 3122 aaKnown RBP1.13□□□□□ -2.23
HMGB3P31-201ENST00000413333 FAM208BQ5VWN6 2430 aa1.13□□□□□ -2.23
HMGB3P31-201ENST00000413333 PLXNB2O15031 1838 aa1.12□□□□□ -2.23
HMGB3P31-201ENST00000413333 NHSL1Q5SYE7 1610 aa1.12□□□□□ -2.23
HMGB3P31-201ENST00000413333 PIEZO2Q9H5I5 2752 aa1.12□□□□□ -2.23
HMGB3P31-201ENST00000413333 ARFGEF2Q9Y6D5 1785 aa1.12□□□□□ -2.23
HMGB3P31-201ENST00000413333 ABCC1P33527 1531 aa1.12□□□□□ -2.23
HMGB3P31-201ENST00000413333 MGPP08493 103 aa1.12□□□□□ -2.23
HMGB3P31-201ENST00000413333 ARMS2P0C7Q2 107 aa1.12□□□□□ -2.23
HMGB3P31-201ENST00000413333 RPL37P61927 97 aaKnown RBP1.12□□□□□ -2.23
HMGB3P31-201ENST00000413333 COX17Q14061 63 aa1.12□□□□□ -2.23
HMGB3P31-201ENST00000413333 HMGN3Q15651 99 aa1.12□□□□□ -2.23
HMGB3P31-201ENST00000413333 SPINK13Q1W4C9 94 aa1.12□□□□□ -2.23
HMGB3P31-201ENST00000413333 BVES-AS1Q5T3Y7 98 aa1.12□□□□□ -2.23
HMGB3P31-201ENST00000413333 LINC00643Q86TS7 51 aa1.12□□□□□ -2.23
HMGB3P31-201ENST00000413333 PRR15LQ9BU68 103 aa1.12□□□□□ -2.23
HMGB3P31-201ENST00000413333 PSENENQ9NZ42 101 aa1.12□□□□□ -2.23
HMGB3P31-201ENST00000413333 SPG11Q96JI7 2443 aa1.12□□□□□ -2.23
HMGB3P31-201ENST00000413333 ANKARQ7Z5J8 1434 aa1.12□□□□□ -2.23
HMGB3P31-201ENST00000413333 ATRQ13535 2644 aa1.12□□□□□ -2.23
HMGB3P31-201ENST00000413333 SETBP1Q9Y6X0 1596 aa1.12□□□□□ -2.23
HMGB3P31-201ENST00000413333 KNDC1Q76NI1 1749 aa1.12□□□□□ -2.23
HMGB3P31-201ENST00000413333 NCOR1O75376 2440 aa1.11□□□□□ -2.23
HMGB3P31-201ENST00000413333 CEP250Q9BV73 2442 aa1.11□□□□□ -2.23
HMGB3P31-201ENST00000413333 TARBP1Q13395 1621 aaKnown RBP1.11□□□□□ -2.23
HMGB3P31-201ENST00000413333 PAPPA2Q9BXP8 1791 aa1.11□□□□□ -2.23
HMGB3P31-201ENST00000413333 SZT2Q5T011 3432 aa1.11□□□□□ -2.23
HMGB3P31-201ENST00000413333 BPTFQ12830 3046 aa1.11□□□□□ -2.23
HMGB3P31-201ENST00000413333 WDFY4Q6ZS81 3184 aa1.11□□□□□ -2.23
HMGB3P31-201ENST00000413333 C5P01031 1676 aa1.11□□□□□ -2.23
HMGB3P31-201ENST00000413333 GVQW2A0A096LPI5 108 aaPredicted RBP1.11□□□□□ -2.23
HMGB3P31-201ENST00000413333 A0A1B0GWA3 101 aa1.11□□□□□ -2.23
HMGB3P31-201ENST00000413333 KANTRA0A1W2PQU2 76 aa1.11□□□□□ -2.23
HMGB3P31-201ENST00000413333 C7orf77A4D0Y5 90 aa1.11□□□□□ -2.23
HMGB3P31-201ENST00000413333 M0R3E3 92 aa1.11□□□□□ -2.23
HMGB3P31-201ENST00000413333 LY6G6CO95867 125 aa1.11□□□□□ -2.23
HMGB3P31-201ENST00000413333 ACYP1P07311 99 aa1.11□□□□□ -2.23
HMGB3P31-201ENST00000413333 SPINK9Q5DT21 86 aa1.11□□□□□ -2.23
HMGB3P31-201ENST00000413333 SMIM11BQ8TCY0 68 aa1.11□□□□□ -2.23
HMGB3P31-201ENST00000413333 SMIM4Q8WVI0 70 aa1.11□□□□□ -2.23
HMGB3P31-201ENST00000413333 LINC00846Q9NV44 126 aa1.11□□□□□ -2.23
HMGB3P31-201ENST00000413333 SCN11AQ9UI33 1791 aa1.11□□□□□ -2.23
HMGB3P31-201ENST00000413333 CFAP46Q8IYW2 2715 aa1.1□□□□□ -2.23
HMGB3P31-201ENST00000413333 UGGT2Q9NYU1 1516 aa1.1□□□□□ -2.23
HMGB3P31-201ENST00000413333 TPRP12270 2363 aaKnown RBP1.1□□□□□ -2.23
HMGB3P31-201ENST00000413333 CLIP1P30622 1438 aa1.1□□□□□ -2.23
HMGB3P31-201ENST00000413333 G3V318 75 aa1.1□□□□□ -2.23
HMGB3P31-201ENST00000413333 PLAC8Q9NZF1 115 aa1.1□□□□□ -2.23
HMGB3P31-201ENST00000413333 POLQO75417 2590 aa1.1□□□□□ -2.23
HMGB3P31-201ENST00000413333 CEP295Q9C0D2 2601 aa1.1□□□□□ -2.23
HMGB3P31-201ENST00000413333 SPTAN1Q13813 2472 aaKnown RBP1.1□□□□□ -2.23
HMGB3P31-201ENST00000413333 TTC28Q96AY4 2481 aa1.1□□□□□ -2.23
HMGB3P31-201ENST00000413333 NBEAL2Q6ZNJ1 2754 aa1.09□□□□□ -2.23
HMGB3P31-201ENST00000413333 EYSQ5T1H1 3165 aa1.09□□□□□ -2.23
HMGB3P31-201ENST00000413333 A0A087WVE0 104 aa1.09□□□□□ -2.23
HMGB3P31-201ENST00000413333 IQCF6A8MYZ5 107 aa1.09□□□□□ -2.23
HMGB3P31-201ENST00000413333 FXYD6P3P58550 94 aa1.09□□□□□ -2.23
HMGB3P31-201ENST00000413333 Q6ZRX8 168 aa1.09□□□□□ -2.23
HMGB3P31-201ENST00000413333 SMCO4Q9NRQ5 59 aa1.09□□□□□ -2.23
HMGB3P31-201ENST00000413333 CFAP47Q6ZTR5 3102 aa1.09□□□□□ -2.24
HMGB3P31-201ENST00000413333 CELSR3Q9NYQ7 3312 aa1.09□□□□□ -2.24
HMGB3P31-201ENST00000413333 FCGBPQ9Y6R7 5405 aaPredicted RBP1.09□□□□□ -2.24
HMGB3P31-201ENST00000413333 XRN1Q8IZH2 1706 aaKnown RBP1.09□□□□□ -2.24
HMGB3P31-201ENST00000413333 C1orf167Q5SNV9 1468 aa1.08□□□□□ -2.24
HMGB3P31-201ENST00000413333 H3BUT2 72 aa1.08□□□□□ -2.24
HMGB3P31-201ENST00000413333 C18orf32Q8TCD1 76 aa1.08□□□□□ -2.24
HMGB3P31-201ENST00000413333 PKD1L3Q7Z443 1732 aa1.08□□□□□ -2.24
HMGB3P31-201ENST00000413333 DNAH12Q6ZR08 3092 aa1.07□□□□□ -2.24
HMGB3P31-201ENST00000413333 ITSN1Q15811 1721 aa1.07□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms