RNA–Protein interactions for RNA: ENST00000405925.2

LIG4-202, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-202ENST00000405925 LINC00308Q8TCZ7 52 aa6.38□□□□□ -1.39
LIG4-202ENST00000405925 DMDP11532 3685 aa6.38□□□□□ -1.39
LIG4-202ENST00000405925 COX6A2Q02221 97 aa6.37□□□□□ -1.39
LIG4-202ENST00000405925 GAGE2AQ6NT46 116 aa6.37□□□□□ -1.39
LIG4-202ENST00000405925 AMELXQ99217 191 aa6.37□□□□□ -1.39
LIG4-202ENST00000405925 SMIM1B2RUZ4 78 aa6.37□□□□□ -1.39
LIG4-202ENST00000405925 TAX1BP3O14907 124 aa6.37□□□□□ -1.39
LIG4-202ENST00000405925 SPATA3Q8NHX4 192 aa6.37□□□□□ -1.39
LIG4-202ENST00000405925 H0YGX0 51 aa6.36□□□□□ -1.39
LIG4-202ENST00000405925 A0A1B0GUV1 79 aa6.36□□□□□ -1.39
LIG4-202ENST00000405925 CYSRT1A8MQ03 144 aa6.36□□□□□ -1.39
LIG4-202ENST00000405925 CSNK1G2-AS1Q8NCQ2 148 aa6.36□□□□□ -1.39
LIG4-202ENST00000405925 K7EIL1 84 aa6.36□□□□□ -1.39
LIG4-202ENST00000405925 GIG44P09565 113 aaPredicted RBP6.36□□□□□ -1.39
LIG4-202ENST00000405925 DIRC1Q969H9 104 aa6.36□□□□□ -1.39
LIG4-202ENST00000405925 MDFIQ99750 246 aa6.36□□□□□ -1.39
LIG4-202ENST00000405925 NSD1Q96L73 2696 aaPredicted RBP6.36□□□□□ -1.39
LIG4-202ENST00000405925 A0A087WZ39 114 aa6.35□□□□□ -1.39
LIG4-202ENST00000405925 UNQ6190/PRO20217Q6UXQ8 127 aa6.35□□□□□ -1.39
LIG4-202ENST00000405925 INAFM2P0DMQ5 153 aa6.35□□□□□ -1.39
LIG4-202ENST00000405925 NTN5Q8WTR8 489 aaPredicted RBP6.35□□□□□ -1.39
LIG4-202ENST00000405925 BAALC-AS2P0C853 105 aa6.35□□□□□ -1.39
LIG4-202ENST00000405925 C2orf91Q6ZV80 131 aa6.35□□□□□ -1.39
LIG4-202ENST00000405925 Q8IZM0 81 aa6.35□□□□□ -1.39
LIG4-202ENST00000405925 F8W1H4 67 aa6.35□□□□□ -1.39
LIG4-202ENST00000405925 CLEC2BQ92478 149 aa6.35□□□□□ -1.39
LIG4-202ENST00000405925 SPANXB1Q9NS25 103 aaPredicted RBP6.35□□□□□ -1.39
LIG4-202ENST00000405925 ORMDL1Q9P0S3 153 aa6.35□□□□□ -1.39
LIG4-202ENST00000405925 LAMA5O15230 3695 aa6.34□□□□□ -1.39
LIG4-202ENST00000405925 UBE2AP49459 152 aa6.34□□□□□ -1.39
LIG4-202ENST00000405925 ESRGQ1W209 222 aa6.34□□□□□ -1.39
LIG4-202ENST00000405925 FAM19A5Q7Z5A7 132 aaPredicted RBP6.34□□□□□ -1.39
LIG4-202ENST00000405925 CELSR2Q9HCU4 2923 aa6.34□□□□□ -1.39
LIG4-202ENST00000405925 TSPEAR-AS2P59090 65 aa6.34□□□□□ -1.39
LIG4-202ENST00000405925 RELNP78509 3460 aa6.33□□□□□ -1.4
LIG4-202ENST00000405925 LINC01620Q4KN68 170 aa6.33□□□□□ -1.4
LIG4-202ENST00000405925 C9orf116Q5BN46 136 aaPredicted RBP6.33□□□□□ -1.4
LIG4-202ENST00000405925 A0A0B4J2C4 111 aa6.33□□□□□ -1.4
LIG4-202ENST00000405925 PPDPFLQ8WWR9 84 aa6.33□□□□□ -1.4
LIG4-202ENST00000405925 NBEAL2Q6ZNJ1 2754 aa6.33□□□□□ -1.4
LIG4-202ENST00000405925 HRNRQ86YZ3 2850 aaPredicted RBP6.32□□□□□ -1.4
LIG4-202ENST00000405925 OCIAD2Q56VL3 154 aa6.32□□□□□ -1.4
LIG4-202ENST00000405925 HIGD2AQ9BW72 106 aa6.32□□□□□ -1.4
LIG4-202ENST00000405925 USP17L23D6RBM5 183 aa6.32□□□□□ -1.4
LIG4-202ENST00000405925 B9D2Q9BPU9 175 aa6.32□□□□□ -1.4
LIG4-202ENST00000405925 TIMM17BO60830 172 aa6.32□□□□□ -1.4
LIG4-202ENST00000405925 DSCR8Q96T75 97 aa6.32□□□□□ -1.4
LIG4-202ENST00000405925 ASPMQ8IZT6 3477 aa6.32□□□□□ -1.4
LIG4-202ENST00000405925 SPANXDQ9BXN6 97 aa6.31□□□□□ -1.4
LIG4-202ENST00000405925 ANKRD29Q8N6D5 301 aa6.31□□□□□ -1.4
LIG4-202ENST00000405925 Q8N3U1 123 aa6.3□□□□□ -1.4
LIG4-202ENST00000405925 IGKV2-28A0A075B6P5 120 aa6.3□□□□□ -1.4
LIG4-202ENST00000405925 IGKV2D-28P01615 120 aa6.3□□□□□ -1.4
LIG4-202ENST00000405925 COX7BP24311 80 aa6.3□□□□□ -1.4
LIG4-202ENST00000405925 HIST1H4AP62805 103 aaKnown RBP6.3□□□□□ -1.4
LIG4-202ENST00000405925 C6orf99Q4VX62 202 aa6.3□□□□□ -1.4
LIG4-202ENST00000405925 C6orf223Q8N319 242 aa6.3□□□□□ -1.4
LIG4-202ENST00000405925 WFDC2Q14508 124 aa6.29□□□□□ -1.4
LIG4-202ENST00000405925 H3BNG1 76 aa6.29□□□□□ -1.4
LIG4-202ENST00000405925 LINC01556Q5JQF7 62 aa6.29□□□□□ -1.4
LIG4-202ENST00000405925 IGHV3OR16-9A0A0B4J2B5 98 aa6.29□□□□□ -1.4
LIG4-202ENST00000405925 PLAC8L1A1L4L8 177 aa6.29□□□□□ -1.4
LIG4-202ENST00000405925 EGFEM1PQ0D2K5 195 aa6.29□□□□□ -1.4
LIG4-202ENST00000405925 C21orf62-AS1Q17RA5 79 aa6.29□□□□□ -1.4
LIG4-202ENST00000405925 LINC01546A6NGU7 62 aa6.28□□□□□ -1.4
LIG4-202ENST00000405925 DCHS2Q6V1P9 2916 aa6.28□□□□□ -1.4
LIG4-202ENST00000405925 LOC107984640A0A0U1RRK4 108 aa6.28□□□□□ -1.4
LIG4-202ENST00000405925 CDK2AP2O75956 126 aa6.28□□□□□ -1.4
LIG4-202ENST00000405925 HAMPP81172 84 aa6.28□□□□□ -1.4
LIG4-202ENST00000405925 TCL1BO95988 128 aa6.28□□□□□ -1.4
LIG4-202ENST00000405925 WDFY3Q8IZQ1 3526 aa6.28□□□□□ -1.4
LIG4-202ENST00000405925 TRIAP1O43715 76 aa6.27□□□□□ -1.41
LIG4-202ENST00000405925 FAM19A1Q7Z5A9 133 aa6.27□□□□□ -1.41
LIG4-202ENST00000405925 SIGMAR1Q99720 223 aa6.27□□□□□ -1.41
LIG4-202ENST00000405925 UBL5Q9BZL1 73 aa6.27□□□□□ -1.41
LIG4-202ENST00000405925 COX17Q14061 63 aa6.27□□□□□ -1.41
LIG4-202ENST00000405925 ADAMTSL4-AS1Q5T5F5 129 aa6.26□□□□□ -1.41
LIG4-202ENST00000405925 TRBV30A0A0K0K1B3 111 aa6.26□□□□□ -1.41
LIG4-202ENST00000405925 NF1P21359 2839 aa6.26□□□□□ -1.41
LIG4-202ENST00000405925 TRBV10-2A0A0K0K1G8 114 aa6.25□□□□□ -1.41
LIG4-202ENST00000405925 RPL37AP8A6NKH3 93 aa6.25□□□□□ -1.41
LIG4-202ENST00000405925 hADV29S1A0JD25 119 aa6.25□□□□□ -1.41
LIG4-202ENST00000405925 LRCOL1A6NCL2 159 aa6.25□□□□□ -1.41
LIG4-202ENST00000405925 C1orf134Q5TEV5 83 aa6.25□□□□□ -1.41
LIG4-202ENST00000405925 LINC00588Q9Y4M8 146 aa6.25□□□□□ -1.41
LIG4-202ENST00000405925 NIPBLQ6KC79 2804 aaeCLIP6.25□□□□□ -1.41
LIG4-202ENST00000405925 TRAV23DV6A0A075B6W5 121 aa6.25□□□□□ -1.41
LIG4-202ENST00000405925 M0R378 163 aa6.25□□□□□ -1.41
LIG4-202ENST00000405925 PRR3P79522 188 aaKnown RBP6.25□□□□□ -1.41
LIG4-202ENST00000405925 TEN1Q86WV5 123 aa6.25□□□□□ -1.41
LIG4-202ENST00000405925 H3BT86 120 aa6.25□□□□□ -1.41
LIG4-202ENST00000405925 SLPIP03973 132 aa6.25□□□□□ -1.41
LIG4-202ENST00000405925 Q6ZRU5 148 aa6.24□□□□□ -1.41
LIG4-202ENST00000405925 A0A096LNI7 61 aa6.24□□□□□ -1.41
LIG4-202ENST00000405925 MUC7Q8TAX7 377 aa6.24□□□□□ -1.41
LIG4-202ENST00000405925 FUSP35637 526 aaKnown RBP eCLIP6.24□□□□□ -1.41
LIG4-202ENST00000405925 IGLV5-39A0A0G2JS06 123 aa6.23□□□□□ -1.41
LIG4-202ENST00000405925 SMIM11BQ8TCY0 68 aa6.23□□□□□ -1.41
LIG4-202ENST00000405925 NDUFC2-KCTD14E9PQ53 114 aa6.23□□□□□ -1.41
LIG4-202ENST00000405925 TM2D3Q9BRN9 247 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 173.7 ms