RNA–Protein interactions for RNA: ENST00000404377.3

TNFSF18-201, Transcript of TNF superfamily member 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF18, Length 2,008 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF18-201ENST00000404377 C10orf113Q5VZT2 155 aa3.44□□□□□ -1.86
TNFSF18-201ENST00000404377 GAFA1Q96PS6 74 aa3.44□□□□□ -1.86
TNFSF18-201ENST00000404377 IGKV3-20P01619 116 aa3.44□□□□□ -1.86
TNFSF18-201ENST00000404377 ERHP84090 104 aaKnown RBP3.44□□□□□ -1.86
TNFSF18-201ENST00000404377 DMAC1Q96GE9 116 aa3.44□□□□□ -1.86
TNFSF18-201ENST00000404377 COL4A4P53420 1690 aaPredicted RBP3.43□□□□□ -1.86
TNFSF18-201ENST00000404377 A0A087WYN8 130 aa3.43□□□□□ -1.86
TNFSF18-201ENST00000404377 IGHV3-64DA0A0J9YX35 117 aa3.43□□□□□ -1.86
TNFSF18-201ENST00000404377 IGKV2-29A2NJV5 120 aaPredicted RBP3.43□□□□□ -1.86
TNFSF18-201ENST00000404377 IGLV3-1P01715 115 aa3.43□□□□□ -1.86
TNFSF18-201ENST00000404377 Q8NBF4 154 aa3.43□□□□□ -1.86
TNFSF18-201ENST00000404377 LINC00308Q8TCZ7 52 aa3.43□□□□□ -1.86
TNFSF18-201ENST00000404377 MINOS1-NBL1R4GNA1 71 aa3.43□□□□□ -1.86
TNFSF18-201ENST00000404377 IGKV3-15P01624 115 aa3.43□□□□□ -1.86
TNFSF18-201ENST00000404377 CRIP1P50238 77 aa3.43□□□□□ -1.86
TNFSF18-201ENST00000404377 CCL18P55774 89 aa3.43□□□□□ -1.86
TNFSF18-201ENST00000404377 C9orf47Q6ZRZ4 202 aa3.43□□□□□ -1.86
TNFSF18-201ENST00000404377 COL4A3Q01955 1670 aa3.42□□□□□ -1.86
TNFSF18-201ENST00000404377 F5P12259 2224 aa3.42□□□□□ -1.86
TNFSF18-201ENST00000404377 INSP01308 110 aa3.42□□□□□ -1.86
TNFSF18-201ENST00000404377 Q6ZTI0 123 aa3.42□□□□□ -1.86
TNFSF18-201ENST00000404377 KMT2BQ9UMN6 2715 aaPredicted RBP3.41□□□□□ -1.86
TNFSF18-201ENST00000404377 NUPR2A6NF83 97 aa3.41□□□□□ -1.86
TNFSF18-201ENST00000404377 PANO1I0J062 215 aa3.41□□□□□ -1.86
TNFSF18-201ENST00000404377 IGKV4-1P06312 121 aa3.41□□□□□ -1.86
TNFSF18-201ENST00000404377 PIGYQ3MUY2 71 aa3.41□□□□□ -1.86
TNFSF18-201ENST00000404377 SPINK9Q5DT21 86 aa3.41□□□□□ -1.86
TNFSF18-201ENST00000404377 Q6YL49 198 aa3.41□□□□□ -1.86
TNFSF18-201ENST00000404377 MED13LQ71F56 2210 aa3.41□□□□□ -1.86
TNFSF18-201ENST00000404377 IGKV3-7A0A075B6H7 116 aa3.41□□□□□ -1.86
TNFSF18-201ENST00000404377 MGPP08493 103 aa3.41□□□□□ -1.86
TNFSF18-201ENST00000404377 DEFB112Q30KQ8 113 aa3.41□□□□□ -1.86
TNFSF18-201ENST00000404377 SPATA8Q6RVD6 105 aa3.41□□□□□ -1.86
TNFSF18-201ENST00000404377 COA5Q86WW8 74 aa3.41□□□□□ -1.86
TNFSF18-201ENST00000404377 SPRR4Q96PI1 79 aa3.41□□□□□ -1.86
TNFSF18-201ENST00000404377 USF3Q68DE3 2245 aa3.41□□□□□ -1.86
TNFSF18-201ENST00000404377 SORL1Q92673 2214 aa3.41□□□□□ -1.86
TNFSF18-201ENST00000404377 PTPRQQ9UMZ3 2332 aa3.4□□□□□ -1.86
TNFSF18-201ENST00000404377 IGLV4-60A0A075B6I1 120 aa3.4□□□□□ -1.87
TNFSF18-201ENST00000404377 ETDCA0A1B0GVM5 59 aa3.4□□□□□ -1.87
TNFSF18-201ENST00000404377 DEFB126Q9BYW3 111 aa3.4□□□□□ -1.87
TNFSF18-201ENST00000404377 COL4A5P29400 1685 aa3.4□□□□□ -1.87
TNFSF18-201ENST00000404377 COL4A2P08572 1712 aa3.4□□□□□ -1.87
TNFSF18-201ENST00000404377 TRGV2A0A075B6R0 118 aa3.39□□□□□ -1.87
TNFSF18-201ENST00000404377 H3BQ85 93 aa3.39□□□□□ -1.87
TNFSF18-201ENST00000404377 NDUFA1O15239 70 aa3.39□□□□□ -1.87
TNFSF18-201ENST00000404377 LINC01565O15544 149 aa3.39□□□□□ -1.87
TNFSF18-201ENST00000404377 RNASE3P12724 160 aaKnown RBP3.39□□□□□ -1.87
TNFSF18-201ENST00000404377 SLURP1P55000 103 aa3.39□□□□□ -1.87
TNFSF18-201ENST00000404377 KRTAP3-1Q9BYR8 98 aa3.39□□□□□ -1.87
TNFSF18-201ENST00000404377 KCNQ1DNQ9H478 68 aa3.39□□□□□ -1.87
TNFSF18-201ENST00000404377 LINC00959A0A1B0GUT2 108 aa3.39□□□□□ -1.87
TNFSF18-201ENST00000404377 UQCR11O14957 56 aa3.39□□□□□ -1.87
TNFSF18-201ENST00000404377 CCL3L1P16619 93 aa3.39□□□□□ -1.87
TNFSF18-201ENST00000404377 C9orf163Q8N9P6 203 aa3.39□□□□□ -1.87
TNFSF18-201ENST00000404377 ANKRD17O75179 2603 aaKnown RBP3.38□□□□□ -1.87
TNFSF18-201ENST00000404377 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.38□□□□□ -1.87
TNFSF18-201ENST00000404377 TRGV4A0A0C4DH28 118 aa3.38□□□□□ -1.87
TNFSF18-201ENST00000404377 ZNF861PO60384 105 aa3.38□□□□□ -1.87
TNFSF18-201ENST00000404377 PRB1P04280 392 aa3.38□□□□□ -1.87
TNFSF18-201ENST00000404377 KRTAP5-9P26371 169 aa3.38□□□□□ -1.87
TNFSF18-201ENST00000404377 LYZP61626 148 aa3.38□□□□□ -1.87
TNFSF18-201ENST00000404377 IGLV7-46A0A075B6I9 117 aa3.37□□□□□ -1.87
TNFSF18-201ENST00000404377 IGKV3OR2-268A0A0C4DH90 116 aa3.37□□□□□ -1.87
TNFSF18-201ENST00000404377 PRB2P02812 416 aaPredicted RBP3.37□□□□□ -1.87
TNFSF18-201ENST00000404377 SPINK14Q6IE38 97 aa3.37□□□□□ -1.87
TNFSF18-201ENST00000404377 ZNRD1Q9P1U0 126 aa3.37□□□□□ -1.87
TNFSF18-201ENST00000404377 MRPS21P82921 87 aaKnown RBP3.37□□□□□ -1.87
TNFSF18-201ENST00000404377 Q5W150 140 aa3.37□□□□□ -1.87
TNFSF18-201ENST00000404377 IGHV3-64A0A075B6Q5 118 aa3.36□□□□□ -1.87
TNFSF18-201ENST00000404377 KRTAP10-11P60412 298 aa3.36□□□□□ -1.87
TNFSF18-201ENST00000404377 SMIM11BQ8TCY0 68 aa3.36□□□□□ -1.87
TNFSF18-201ENST00000404377 WWC2-AS2Q96NR7 200 aa3.36□□□□□ -1.87
TNFSF18-201ENST00000404377 UNC79Q9P2D8 2635 aa3.35□□□□□ -1.87
TNFSF18-201ENST00000404377 URB1O60287 2271 aaKnown RBP3.35□□□□□ -1.87
TNFSF18-201ENST00000404377 PLCE1Q9P212 2302 aa3.35□□□□□ -1.87
TNFSF18-201ENST00000404377 TRBV6-4A0A1B0GX49 114 aa3.34□□□□□ -1.87
TNFSF18-201ENST00000404377 CNTRLQ7Z7A1 2325 aa3.34□□□□□ -1.87
TNFSF18-201ENST00000404377 A0A1W2PNU3 283 aaPredicted RBP3.34□□□□□ -1.88
TNFSF18-201ENST00000404377 KRTAP15-1Q3LI76 137 aa3.34□□□□□ -1.88
TNFSF18-201ENST00000404377 LINC00612Q8N6U2 182 aa3.34□□□□□ -1.88
TNFSF18-201ENST00000404377 KLK12Q9UKR0 248 aa3.34□□□□□ -1.88
TNFSF18-201ENST00000404377 KNL1Q8NG31 2342 aa3.33□□□□□ -1.88
TNFSF18-201ENST00000404377 PROK1P58294 105 aa3.32□□□□□ -1.88
TNFSF18-201ENST00000404377 PRCDQ00LT1 54 aa3.32□□□□□ -1.88
TNFSF18-201ENST00000404377 POLR2KP53803 58 aaKnown RBP3.31□□□□□ -1.88
TNFSF18-201ENST00000404377 RPL39P62891 51 aaKnown RBP3.31□□□□□ -1.88
TNFSF18-201ENST00000404377 PRB3Q04118 309 aaPredicted RBP3.31□□□□□ -1.88
TNFSF18-201ENST00000404377 ST20-AS1Q8NBB2 130 aa3.31□□□□□ -1.88
TNFSF18-201ENST00000404377 M0R2N4 97 aa3.31□□□□□ -1.88
TNFSF18-201ENST00000404377 A0A087WTM6 91 aa3.3□□□□□ -1.88
TNFSF18-201ENST00000404377 COX7BP24311 80 aa3.3□□□□□ -1.88
TNFSF18-201ENST00000404377 IGFL4Q6B9Z1 124 aa3.3□□□□□ -1.88
TNFSF18-201ENST00000404377 RPL39LQ96EH5 51 aaKnown RBP3.3□□□□□ -1.88
TNFSF18-201ENST00000404377 C16orf74Q96GX8 76 aa3.3□□□□□ -1.88
TNFSF18-201ENST00000404377 ZFHX2Q9C0A1 2572 aaPredicted RBP3.3□□□□□ -1.88
TNFSF18-201ENST00000404377 IGKV2-28A0A075B6P5 120 aa3.29□□□□□ -1.88
TNFSF18-201ENST00000404377 IGKV2D-28P01615 120 aa3.29□□□□□ -1.88
TNFSF18-201ENST00000404377 LINC00158P58513 81 aa3.29□□□□□ -1.88
TNFSF18-201ENST00000404377 SPINT4Q6UDR6 99 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms