RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 NTN5Q8WTR8 489 aaPredicted RBP18.12■□□□□ 0.49
CPNE1-203ENST00000397442 HERV-K104P63124 156 aa18.11■□□□□ 0.49
CPNE1-203ENST00000397442 CTAG1AP78358 180 aa18.11■□□□□ 0.49
CPNE1-203ENST00000397442 CXCL5P42830 114 aa18.1■□□□□ 0.49
CPNE1-203ENST00000397442 CKS1BP61024 79 aa18.1■□□□□ 0.49
CPNE1-203ENST00000397442 LITAFQ99732 161 aa18.1■□□□□ 0.49
CPNE1-203ENST00000397442 DNAH6Q9C0G6 4158 aa18.1■□□□□ 0.49
CPNE1-203ENST00000397442 SFTA2Q6UW10 78 aa18.09■□□□□ 0.49
CPNE1-203ENST00000397442 PSCAO43653 123 aa18.09■□□□□ 0.49
CPNE1-203ENST00000397442 LINC00587B1AMM8 73 aa18.08■□□□□ 0.48
CPNE1-203ENST00000397442 ZNF561-AS1K7EIQ3 104 aa18.08■□□□□ 0.48
CPNE1-203ENST00000397442 WFDC2Q14508 124 aa18.08■□□□□ 0.48
CPNE1-203ENST00000397442 LECT2O14960 151 aa18.07■□□□□ 0.48
CPNE1-203ENST00000397442 C10orf25Q5T742 122 aa18.07■□□□□ 0.48
CPNE1-203ENST00000397442 UNQ6190/PRO20217Q6UXQ8 127 aa18.06■□□□□ 0.48
CPNE1-203ENST00000397442 ADAMTSL4-AS1Q5T5F5 129 aa18.06■□□□□ 0.48
CPNE1-203ENST00000397442 C2orf48Q96LS8 159 aa18.05■□□□□ 0.48
CPNE1-203ENST00000397442 TIMM17BO60830 172 aa18.04■□□□□ 0.48
CPNE1-203ENST00000397442 SPANXB1Q9NS25 103 aaPredicted RBP18.04■□□□□ 0.48
CPNE1-203ENST00000397442 MEIG1Q5JSS6 88 aa18.02■□□□□ 0.47
CPNE1-203ENST00000397442 LRCOL1A6NCL2 159 aa18.01■□□□□ 0.47
CPNE1-203ENST00000397442 TMEM238C9JI98 176 aa18.01■□□□□ 0.47
CPNE1-203ENST00000397442 SMIM13P0DJ93 91 aa18.01■□□□□ 0.47
CPNE1-203ENST00000397442 CAMK2N2Q96S95 79 aa18.01■□□□□ 0.47
CPNE1-203ENST00000397442 A0A0U1RRA0 63 aa18■□□□□ 0.47
CPNE1-203ENST00000397442 HSD52Q0P140 79 aa18■□□□□ 0.47
CPNE1-203ENST00000397442 ERG28Q9UKR5 140 aa18■□□□□ 0.47
CPNE1-203ENST00000397442 SLPIP03973 132 aa17.99■□□□□ 0.47
CPNE1-203ENST00000397442 C9orf116Q5BN46 136 aaPredicted RBP17.99■□□□□ 0.47
CPNE1-203ENST00000397442 Q6ZRU5 148 aa17.99■□□□□ 0.47
CPNE1-203ENST00000397442 HIST1H4GQ99525 98 aa17.99■□□□□ 0.47
CPNE1-203ENST00000397442 C6orf48Q9UBA6 75 aa17.99■□□□□ 0.47
CPNE1-203ENST00000397442 F8WDY8 70 aa17.99■□□□□ 0.47
CPNE1-203ENST00000397442 CIRBPQ14011 172 aaKnown RBP17.99■□□□□ 0.47
CPNE1-203ENST00000397442 C1orf134Q5TEV5 83 aa17.99■□□□□ 0.47
CPNE1-203ENST00000397442 SRSF9Q13242 221 aaKnown RBP eCLIP17.98■□□□□ 0.47
CPNE1-203ENST00000397442 TAL2Q16559 108 aa17.98■□□□□ 0.47
CPNE1-203ENST00000397442 DAND5Q8N907 189 aa17.98■□□□□ 0.47
CPNE1-203ENST00000397442 SPANXDQ9BXN6 97 aa17.97■□□□□ 0.47
CPNE1-203ENST00000397442 SPANXCQ9NY87 97 aa17.97■□□□□ 0.47
CPNE1-203ENST00000397442 DNAH2Q9P225 4427 aa17.97■□□□□ 0.47
CPNE1-203ENST00000397442 PFN2P35080 140 aa17.96■□□□□ 0.47
CPNE1-203ENST00000397442 TRBV30A0A0K0K1B3 111 aa17.95■□□□□ 0.46
CPNE1-203ENST00000397442 HINT1P49773 126 aaPredicted RBP17.95■□□□□ 0.46
CPNE1-203ENST00000397442 SYCNQ0VAF6 134 aa17.95■□□□□ 0.46
CPNE1-203ENST00000397442 LCE6AA0A183 80 aa17.94■□□□□ 0.46
CPNE1-203ENST00000397442 LINC00158P58513 81 aa17.94■□□□□ 0.46
CPNE1-203ENST00000397442 CEND1Q8N111 149 aa17.94■□□□□ 0.46
CPNE1-203ENST00000397442 BVES-AS1Q5T3Y7 98 aa17.93■□□□□ 0.46
CPNE1-203ENST00000397442 COX17Q14061 63 aa17.93■□□□□ 0.46
CPNE1-203ENST00000397442 Q6ZVH6 145 aa17.93■□□□□ 0.46
CPNE1-203ENST00000397442 HYDINQ4G0P3 5121 aa17.93■□□□□ 0.46
CPNE1-203ENST00000397442 EIF4EBP3O60516 100 aaPredicted RBP17.92■□□□□ 0.46
CPNE1-203ENST00000397442 GCSHP23434 173 aa17.92■□□□□ 0.46
CPNE1-203ENST00000397442 MIR7-3HGQ8N6C7 128 aa17.92■□□□□ 0.46
CPNE1-203ENST00000397442 SNHG12Q9BXW3 62 aa17.91■□□□□ 0.46
CPNE1-203ENST00000397442 C14orf177Q52M58 125 aa17.9■□□□□ 0.46
CPNE1-203ENST00000397442 MUSTN1Q8IVN3 82 aa17.9■□□□□ 0.46
CPNE1-203ENST00000397442 CARD19Q96LW7 228 aa17.9■□□□□ 0.46
CPNE1-203ENST00000397442 SACSQ9NZJ4 4579 aa17.9■□□□□ 0.46
CPNE1-203ENST00000397442 FXYD2P54710 66 aa17.9■□□□□ 0.46
CPNE1-203ENST00000397442 NPC2P61916 151 aa17.89■□□□□ 0.45
CPNE1-203ENST00000397442 SOSTDC1Q6X4U4 206 aa17.89■□□□□ 0.45
CPNE1-203ENST00000397442 M0R143 59 aa17.88■□□□□ 0.45
CPNE1-203ENST00000397442 PTTG1IPP53801 180 aa17.88■□□□□ 0.45
CPNE1-203ENST00000397442 A0A087WTM6 91 aa17.87■□□□□ 0.45
CPNE1-203ENST00000397442 EREGO14944 169 aa17.87■□□□□ 0.45
CPNE1-203ENST00000397442 LINC00308Q8TCZ7 52 aa17.87■□□□□ 0.45
CPNE1-203ENST00000397442 CNBPP62633 177 aaKnown RBP17.87■□□□□ 0.45
CPNE1-203ENST00000397442 RNF151Q2KHN1 245 aa17.87■□□□□ 0.45
CPNE1-203ENST00000397442 IFITM1P13164 125 aa17.86■□□□□ 0.45
CPNE1-203ENST00000397442 BATFQ16520 125 aa17.85■□□□□ 0.45
CPNE1-203ENST00000397442 RTL8CO15255 209 aa17.84■□□□□ 0.45
CPNE1-203ENST00000397442 Q8N814 137 aa17.84■□□□□ 0.45
CPNE1-203ENST00000397442 IGLV2-33A0A075B6J2 118 aaPredicted RBP17.83■□□□□ 0.45
CPNE1-203ENST00000397442 PPDPFQ9H3Y8 114 aa17.81■□□□□ 0.44
CPNE1-203ENST00000397442 SND1-IT1Q9HBX3 110 aa17.81■□□□□ 0.44
CPNE1-203ENST00000397442 DNAH17Q9UFH2 4485 aa17.81■□□□□ 0.44
CPNE1-203ENST00000397442 NDUFC2-KCTD14E9PQ53 114 aa17.8■□□□□ 0.44
CPNE1-203ENST00000397442 FRAS1Q86XX4 4008 aa17.8■□□□□ 0.44
CPNE1-203ENST00000397442 A4D1N5 150 aa17.8■□□□□ 0.44
CPNE1-203ENST00000397442 RPL24P83731 157 aaKnown RBP17.8■□□□□ 0.44
CPNE1-203ENST00000397442 LOC107984156A0A0G2JMH3 177 aa17.79■□□□□ 0.44
CPNE1-203ENST00000397442 ARL17AQ8IVW1 177 aa17.79■□□□□ 0.44
CPNE1-203ENST00000397442 TLX1NBP0CAT3 122 aa17.78■□□□□ 0.44
CPNE1-203ENST00000397442 TNP2Q05952 138 aa17.78■□□□□ 0.44
CPNE1-203ENST00000397442 Q6ZRP5 223 aa17.78■□□□□ 0.44
CPNE1-203ENST00000397442 TRAV16A0A0A6YYK6 109 aaPredicted RBP17.77■□□□□ 0.44
CPNE1-203ENST00000397442 COPS9Q8WXC6 57 aa17.77■□□□□ 0.43
CPNE1-203ENST00000397442 TMEM238LA0A1B0GVL6 79 aa17.74■□□□□ 0.43
CPNE1-203ENST00000397442 A6NJY4 79 aa17.74■□□□□ 0.43
CPNE1-203ENST00000397442 NHP2Q9NX24 153 aaKnown RBP17.74■□□□□ 0.43
CPNE1-203ENST00000397442 XAGE1AQ9HD64 81 aa17.74■□□□□ 0.43
CPNE1-203ENST00000397442 A0A1B0GWB2 263 aa17.72■□□□□ 0.43
CPNE1-203ENST00000397442 CFC1BP0CG36 223 aa17.72■□□□□ 0.43
CPNE1-203ENST00000397442 CFC1P0CG37 223 aa17.72■□□□□ 0.43
CPNE1-203ENST00000397442 GAGE2EQ4V326 116 aa17.72■□□□□ 0.43
CPNE1-203ENST00000397442 GAGE2DQ9UEU5 116 aa17.72■□□□□ 0.43
CPNE1-203ENST00000397442 A6NDN8 102 aa17.71■□□□□ 0.43
CPNE1-203ENST00000397442 C9orf163Q8N9P6 203 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms