RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 H3BUX3 64 aa6.15□□□□□ -1.43
NDE1-202ENST00000396355 ATP6V0E1O15342 81 aa6.15□□□□□ -1.43
NDE1-202ENST00000396355 PRR9Q5T870 116 aa6.15□□□□□ -1.43
NDE1-202ENST00000396355 CLPSL2Q6UWE3 100 aa6.15□□□□□ -1.43
NDE1-202ENST00000396355 SMIM11BQ8TCY0 68 aa6.15□□□□□ -1.43
NDE1-202ENST00000396355 FBN3Q75N90 2809 aa6.14□□□□□ -1.43
NDE1-202ENST00000396355 TMEM256-PLSCR3K7ERE1 68 aa6.14□□□□□ -1.43
NDE1-202ENST00000396355 EIF4EBP3O60516 100 aaPredicted RBP6.14□□□□□ -1.43
NDE1-202ENST00000396355 NREPQ16612 68 aa6.14□□□□□ -1.43
NDE1-202ENST00000396355 TRAV10A0A0B4J240 114 aa6.14□□□□□ -1.43
NDE1-202ENST00000396355 NDUFC1O43677 76 aa6.14□□□□□ -1.43
NDE1-202ENST00000396355 IGHV1-69P01742 117 aa6.14□□□□□ -1.43
NDE1-202ENST00000396355 RHPN1-AS1Q9BWJ2 59 aa6.14□□□□□ -1.43
NDE1-202ENST00000396355 CLPSL1A2RUU4 121 aa6.14□□□□□ -1.43
NDE1-202ENST00000396355 PROK1P58294 105 aa6.14□□□□□ -1.43
NDE1-202ENST00000396355 Q8N9L7 120 aa6.14□□□□□ -1.43
NDE1-202ENST00000396355 TMEM254Q8TBM7 123 aa6.13□□□□□ -1.43
NDE1-202ENST00000396355 SMAD5-AS1Q9Y6J3 95 aa6.13□□□□□ -1.43
NDE1-202ENST00000396355 ZNF575Q86XF7 245 aa6.13□□□□□ -1.43
NDE1-202ENST00000396355 DEFB105AQ8NG35 78 aa6.13□□□□□ -1.43
NDE1-202ENST00000396355 CUBNO60494 3623 aa6.13□□□□□ -1.43
NDE1-202ENST00000396355 ODF3BA8MYP8 253 aa6.13□□□□□ -1.43
NDE1-202ENST00000396355 IGLV11-55A0A075B6I3 123 aa6.12□□□□□ -1.43
NDE1-202ENST00000396355 TRGV1A0A0A0MS02 117 aa6.12□□□□□ -1.43
NDE1-202ENST00000396355 APOC4P55056 127 aa6.12□□□□□ -1.43
NDE1-202ENST00000396355 CFHR3Q02985 330 aa6.12□□□□□ -1.43
NDE1-202ENST00000396355 FAM30AQ9NZY2 134 aa6.12□□□□□ -1.43
NDE1-202ENST00000396355 Q9UF83 564 aa6.12□□□□□ -1.43
NDE1-202ENST00000396355 NPBQ8NG41 125 aa6.12□□□□□ -1.43
NDE1-202ENST00000396355 PRR15LQ9BU68 103 aa6.12□□□□□ -1.43
NDE1-202ENST00000396355 TRGV2A0A075B6R0 118 aa6.12□□□□□ -1.43
NDE1-202ENST00000396355 H7BZZ5 65 aa6.12□□□□□ -1.43
NDE1-202ENST00000396355 KRTAP24-1Q3LI83 254 aa6.12□□□□□ -1.43
NDE1-202ENST00000396355 SERTAD4-AS1Q5TG53 156 aa6.12□□□□□ -1.43
NDE1-202ENST00000396355 FAM19A3Q7Z5A8 133 aa6.12□□□□□ -1.43
NDE1-202ENST00000396355 Q8N6K4 173 aa6.12□□□□□ -1.43
NDE1-202ENST00000396355 ZANQ9Y493 2812 aa6.11□□□□□ -1.43
NDE1-202ENST00000396355 ZNF561-AS1K7EIQ3 104 aa6.11□□□□□ -1.43
NDE1-202ENST00000396355 RNF5Q99942 180 aa6.11□□□□□ -1.43
NDE1-202ENST00000396355 TM2D3Q9BRN9 247 aa6.11□□□□□ -1.43
NDE1-202ENST00000396355 PLAC8L1A1L4L8 177 aa6.11□□□□□ -1.43
NDE1-202ENST00000396355 BPY2O14599 106 aa6.11□□□□□ -1.43
NDE1-202ENST00000396355 ATP5EP2Q5VTU8 51 aa6.11□□□□□ -1.43
NDE1-202ENST00000396355 C11orf71Q6IPW1 123 aa6.11□□□□□ -1.43
NDE1-202ENST00000396355 FP248Q71RG6 208 aaPredicted RBP6.11□□□□□ -1.43
NDE1-202ENST00000396355 UBE2E2Q96LR5 201 aa6.11□□□□□ -1.43
NDE1-202ENST00000396355 CNFNQ9BYD5 112 aa6.11□□□□□ -1.43
NDE1-202ENST00000396355 ZFP36P26651 326 aaKnown RBP6.1□□□□□ -1.43
NDE1-202ENST00000396355 POLR2KP53803 58 aaKnown RBP6.1□□□□□ -1.43
NDE1-202ENST00000396355 FAM222AQ5U5X8 452 aa6.1□□□□□ -1.43
NDE1-202ENST00000396355 IGHV4OR15-8A0A075B7B6 117 aa6.1□□□□□ -1.43
NDE1-202ENST00000396355 A0A087WW49 117 aa6.1□□□□□ -1.43
NDE1-202ENST00000396355 ATP5EP56381 51 aaPredicted RBP6.1□□□□□ -1.43
NDE1-202ENST00000396355 UBE2BP63146 152 aa6.1□□□□□ -1.43
NDE1-202ENST00000396355 MUC4Q99102 2169 aa6.1□□□□□ -1.43
NDE1-202ENST00000396355 PRYO14603 147 aa6.09□□□□□ -1.43
NDE1-202ENST00000396355 HIGD2AQ9BW72 106 aa6.09□□□□□ -1.43
NDE1-202ENST00000396355 A8MUN3 132 aa6.09□□□□□ -1.43
NDE1-202ENST00000396355 PRM2P04554 102 aa6.09□□□□□ -1.43
NDE1-202ENST00000396355 C9orf129Q5T035 196 aaKnown RBP6.09□□□□□ -1.43
NDE1-202ENST00000396355 LINC00467Q9BRT7 94 aa6.09□□□□□ -1.43
NDE1-202ENST00000396355 PRR3P79522 188 aaKnown RBP6.09□□□□□ -1.43
NDE1-202ENST00000396355 MINOS1Q5TGZ0 78 aa6.09□□□□□ -1.43
NDE1-202ENST00000396355 GPHB5Q86YW7 130 aa6.09□□□□□ -1.43
NDE1-202ENST00000396355 LINC01356Q8N9X3 169 aa6.09□□□□□ -1.43
NDE1-202ENST00000396355 C11orf45Q8TAV5 145 aa6.09□□□□□ -1.43
NDE1-202ENST00000396355 MINOS1-NBL1R4GNA1 71 aa6.09□□□□□ -1.43
NDE1-202ENST00000396355 A0A0J9YWU9 116 aa6.08□□□□□ -1.44
NDE1-202ENST00000396355 C3orf84H3BNL1 204 aa6.08□□□□□ -1.44
NDE1-202ENST00000396355 BEAN1Q3B7T3 259 aa6.08□□□□□ -1.44
NDE1-202ENST00000396355 IGHV7-81A0A0B4J1V7 117 aa6.08□□□□□ -1.44
NDE1-202ENST00000396355 IGHV4-61A0A0C4DH41 118 aa6.08□□□□□ -1.44
NDE1-202ENST00000396355 TRBV6-5A0A0K0K1A5 114 aa6.08□□□□□ -1.44
NDE1-202ENST00000396355 B4DSR2 109 aa6.08□□□□□ -1.44
NDE1-202ENST00000396355 KRTAP1-3Q8IUG1 177 aa6.08□□□□□ -1.44
NDE1-202ENST00000396355 RNASE3P12724 160 aaKnown RBP6.07□□□□□ -1.44
NDE1-202ENST00000396355 C9orf47Q6ZRZ4 202 aa6.07□□□□□ -1.44
NDE1-202ENST00000396355 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.07□□□□□ -1.44
NDE1-202ENST00000396355 IGHV4-31P0DP07 118 aa6.07□□□□□ -1.44
NDE1-202ENST00000396355 MXRA5Q9NR99 2828 aa6.07□□□□□ -1.44
NDE1-202ENST00000396355 NDUFA1O15239 70 aa6.07□□□□□ -1.44
NDE1-202ENST00000396355 Q8N9W7 124 aa6.07□□□□□ -1.44
NDE1-202ENST00000396355 RBM12B-AS1Q9P1G2 102 aa6.07□□□□□ -1.44
NDE1-202ENST00000396355 M0QY20 66 aa6.06□□□□□ -1.44
NDE1-202ENST00000396355 C6orf99Q4VX62 202 aa6.06□□□□□ -1.44
NDE1-202ENST00000396355 DEFB121Q5J5C9 76 aa6.06□□□□□ -1.44
NDE1-202ENST00000396355 UNQ9165/PRO28630Q6UXU0 137 aa6.06□□□□□ -1.44
NDE1-202ENST00000396355 DNAJC9-AS1A6NH13 148 aa6.06□□□□□ -1.44
NDE1-202ENST00000396355 COX8CQ7Z4L0 72 aa6.06□□□□□ -1.44
NDE1-202ENST00000396355 ZFAND2AQ8N6M9 145 aa6.06□□□□□ -1.44
NDE1-202ENST00000396355 LINC01547P58512 204 aaPredicted RBP6.06□□□□□ -1.44
NDE1-202ENST00000396355 TRGV4A0A0C4DH28 118 aa6.05□□□□□ -1.44
NDE1-202ENST00000396355 A8MTW9 85 aa6.05□□□□□ -1.44
NDE1-202ENST00000396355 A0A096LPF7 62 aa6.05□□□□□ -1.44
NDE1-202ENST00000396355 LINC00337Q8N6G1 96 aa6.05□□□□□ -1.44
NDE1-202ENST00000396355 AMELXQ99217 191 aa6.05□□□□□ -1.44
NDE1-202ENST00000396355 A0A0J9YX75 114 aa6.05□□□□□ -1.44
NDE1-202ENST00000396355 UBE2AP49459 152 aa6.05□□□□□ -1.44
NDE1-202ENST00000396355 CCDC140Q96MF4 163 aa6.05□□□□□ -1.44
NDE1-202ENST00000396355 AKAP9Q99996 3911 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms