RNA–Protein interactions for RNA: ENST00000394961.6

SMARCAD1-203, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

TSL 2

Gene SMARCAD1, Length 3,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-203ENST00000394961 RPL39P62891 51 aaKnown RBP3.68□□□□□ -1.82
SMARCAD1-203ENST00000394961 TOMM6Q96B49 74 aa3.68□□□□□ -1.82
SMARCAD1-203ENST00000394961 MAP1LC3AQ9H492 121 aa3.68□□□□□ -1.82
SMARCAD1-203ENST00000394961 CYSLTR1Q9Y271 337 aa3.68□□□□□ -1.82
SMARCAD1-203ENST00000394961 SFTA2Q6UW10 78 aa3.68□□□□□ -1.82
SMARCAD1-203ENST00000394961 LINC00469Q8N7U9 141 aa3.68□□□□□ -1.82
SMARCAD1-203ENST00000394961 TINCRA0A1B0GVN0 87 aa3.67□□□□□ -1.82
SMARCAD1-203ENST00000394961 F8VRH5 84 aa3.67□□□□□ -1.82
SMARCAD1-203ENST00000394961 RPL28P46779 137 aaKnown RBP3.67□□□□□ -1.82
SMARCAD1-203ENST00000394961 PRELID3AQ96N28 172 aa3.67□□□□□ -1.82
SMARCAD1-203ENST00000394961 C9JQL5 133 aa3.67□□□□□ -1.82
SMARCAD1-203ENST00000394961 FAM168BA1KXE4 195 aa3.67□□□□□ -1.82
SMARCAD1-203ENST00000394961 GNB1LQ9BYB4 327 aa3.67□□□□□ -1.82
SMARCAD1-203ENST00000394961 TMEM136Q6ZRR5 245 aa3.66□□□□□ -1.82
SMARCAD1-203ENST00000394961 SLC7A5P1Q8MH63 180 aa3.66□□□□□ -1.82
SMARCAD1-203ENST00000394961 LRP2P98164 4655 aa3.66□□□□□ -1.82
SMARCAD1-203ENST00000394961 RPS29P62273 56 aaKnown RBP3.66□□□□□ -1.82
SMARCAD1-203ENST00000394961 COX19Q49B96 90 aa3.66□□□□□ -1.82
SMARCAD1-203ENST00000394961 OPRPNQ99935 248 aaPredicted RBP3.66□□□□□ -1.82
SMARCAD1-203ENST00000394961 C22orf24Q9Y442 160 aa3.66□□□□□ -1.82
SMARCAD1-203ENST00000394961 COX17Q14061 63 aa3.66□□□□□ -1.82
SMARCAD1-203ENST00000394961 ADIRFQ15847 76 aa3.66□□□□□ -1.82
SMARCAD1-203ENST00000394961 FP248Q71RG6 208 aaPredicted RBP3.66□□□□□ -1.82
SMARCAD1-203ENST00000394961 MRPL55Q7Z7F7 128 aaKnown RBP3.66□□□□□ -1.82
SMARCAD1-203ENST00000394961 MRPL18Q9H0U6 180 aaKnown RBP3.66□□□□□ -1.82
SMARCAD1-203ENST00000394961 RAB5AP20339 215 aa3.65□□□□□ -1.82
SMARCAD1-203ENST00000394961 KRTAP3-3Q9BYR6 98 aa3.65□□□□□ -1.82
SMARCAD1-203ENST00000394961 KRTAP3-2Q9BYR7 98 aa3.65□□□□□ -1.82
SMARCAD1-203ENST00000394961 ERASQ7Z444 233 aa3.65□□□□□ -1.83
SMARCAD1-203ENST00000394961 FAM19A5Q7Z5A7 132 aaPredicted RBP3.65□□□□□ -1.83
SMARCAD1-203ENST00000394961 ALKBH7Q9BT30 221 aaPredicted RBP3.65□□□□□ -1.83
SMARCAD1-203ENST00000394961 CRYGAP11844 174 aa3.64□□□□□ -1.83
SMARCAD1-203ENST00000394961 RNASE13Q5GAN3 156 aaKnown RBP3.64□□□□□ -1.83
SMARCAD1-203ENST00000394961 CTDSP1Q9GZU7 261 aa3.64□□□□□ -1.83
SMARCAD1-203ENST00000394961 IGLV5-39A0A0G2JS06 123 aa3.64□□□□□ -1.83
SMARCAD1-203ENST00000394961 SMIM1B2RUZ4 78 aa3.64□□□□□ -1.83
SMARCAD1-203ENST00000394961 PRSS2P07478 247 aa3.64□□□□□ -1.83
SMARCAD1-203ENST00000394961 SPAG11AQ6PDA7 123 aa3.64□□□□□ -1.83
SMARCAD1-203ENST00000394961 VCX2Q9H322 139 aa3.64□□□□□ -1.83
SMARCAD1-203ENST00000394961 IGLC3P0DOY3 106 aa3.63□□□□□ -1.83
SMARCAD1-203ENST00000394961 UBE2BP63146 152 aa3.63□□□□□ -1.83
SMARCAD1-203ENST00000394961 MT-ND4LP03901 98 aa3.63□□□□□ -1.83
SMARCAD1-203ENST00000394961 UQCC3Q6UW78 93 aa3.63□□□□□ -1.83
SMARCAD1-203ENST00000394961 FA2HQ7L5A8 372 aa3.63□□□□□ -1.83
SMARCAD1-203ENST00000394961 CKS1BP61024 79 aa3.63□□□□□ -1.83
SMARCAD1-203ENST00000394961 SRSF3P84103 164 aaKnown RBP3.63□□□□□ -1.83
SMARCAD1-203ENST00000394961 KRTAP13-2Q52LG2 175 aa3.62□□□□□ -1.83
SMARCAD1-203ENST00000394961 COX7B2Q8TF08 81 aa3.62□□□□□ -1.83
SMARCAD1-203ENST00000394961 CHTOPQ9Y3Y2 248 aaKnown RBP3.62□□□□□ -1.83
SMARCAD1-203ENST00000394961 MRPL54Q6P161 138 aaKnown RBP3.62□□□□□ -1.83
SMARCAD1-203ENST00000394961 GAGE2EQ4V326 116 aa3.62□□□□□ -1.83
SMARCAD1-203ENST00000394961 LINC00167Q96N53 147 aa3.62□□□□□ -1.83
SMARCAD1-203ENST00000394961 GAGE2DQ9UEU5 116 aa3.62□□□□□ -1.83
SMARCAD1-203ENST00000394961 C5orf52A6NGY3 159 aa3.61□□□□□ -1.83
SMARCAD1-203ENST00000394961 C2orf82Q6UX34 121 aa3.61□□□□□ -1.83
SMARCAD1-203ENST00000394961 CDKN2A-AS1Q9UH64 79 aa3.61□□□□□ -1.83
SMARCAD1-203ENST00000394961 LPAP08519 4548 aa3.61□□□□□ -1.83
SMARCAD1-203ENST00000394961 A0A087X002 238 aa3.61□□□□□ -1.83
SMARCAD1-203ENST00000394961 C6orf226Q5I0X4 101 aa3.61□□□□□ -1.83
SMARCAD1-203ENST00000394961 TYMSOSQ8TAI1 123 aa3.61□□□□□ -1.83
SMARCAD1-203ENST00000394961 VPREB1P12018 145 aa3.61□□□□□ -1.83
SMARCAD1-203ENST00000394961 GEMIN7Q9H840 131 aaKnown RBP3.61□□□□□ -1.83
SMARCAD1-203ENST00000394961 LOC107984156A0A0G2JMH3 177 aa3.6□□□□□ -1.83
SMARCAD1-203ENST00000394961 LINC00483Q53H64 154 aa3.6□□□□□ -1.83
SMARCAD1-203ENST00000394961 C10orf91Q5T1B1 145 aa3.6□□□□□ -1.83
SMARCAD1-203ENST00000394961 ARL17AQ8IVW1 177 aa3.6□□□□□ -1.83
SMARCAD1-203ENST00000394961 CST9LQ9H4G1 147 aa3.6□□□□□ -1.83
SMARCAD1-203ENST00000394961 SPRR1AP35321 89 aa3.6□□□□□ -1.83
SMARCAD1-203ENST00000394961 PMVKQ15126 192 aa3.6□□□□□ -1.83
SMARCAD1-203ENST00000394961 H3BRM9 83 aa3.6□□□□□ -1.83
SMARCAD1-203ENST00000394961 CLLU1Q5K131 121 aa3.6□□□□□ -1.83
SMARCAD1-203ENST00000394961 LINC00304Q8N9R0 145 aa3.6□□□□□ -1.83
SMARCAD1-203ENST00000394961 ASB16-AS1Q495Z4 193 aa3.59□□□□□ -1.83
SMARCAD1-203ENST00000394961 ZNF706Q9Y5V0 76 aaPredicted RBP3.59□□□□□ -1.83
SMARCAD1-203ENST00000394961 RPL24P83731 157 aaKnown RBP3.59□□□□□ -1.84
SMARCAD1-203ENST00000394961 LINC00337Q8N6G1 96 aa3.59□□□□□ -1.84
SMARCAD1-203ENST00000394961 PRYO14603 147 aa3.58□□□□□ -1.84
SMARCAD1-203ENST00000394961 PRR4Q16378 134 aa3.58□□□□□ -1.84
SMARCAD1-203ENST00000394961 ZNF625Q96I27 306 aaPredicted RBP3.58□□□□□ -1.84
SMARCAD1-203ENST00000394961 SCGB3A1Q96QR1 104 aa3.58□□□□□ -1.84
SMARCAD1-203ENST00000394961 KRTAP4-16G5E9R7 235 aaPredicted RBP3.57□□□□□ -1.84
SMARCAD1-203ENST00000394961 M0R378 163 aa3.57□□□□□ -1.84
SMARCAD1-203ENST00000394961 SEC11CQ9BY50 192 aa3.57□□□□□ -1.84
SMARCAD1-203ENST00000394961 ATP5LO75964 103 aa3.57□□□□□ -1.84
SMARCAD1-203ENST00000394961 TRAV12-1A0A0B4J245 112 aa3.56□□□□□ -1.84
SMARCAD1-203ENST00000394961 KRTAP13-3Q3SY46 172 aa3.56□□□□□ -1.84
SMARCAD1-203ENST00000394961 NKAPP1Q8N9T2 125 aa3.56□□□□□ -1.84
SMARCAD1-203ENST00000394961 SPRR4Q96PI1 79 aa3.56□□□□□ -1.84
SMARCAD1-203ENST00000394961 TMEM126AQ9H061 195 aa3.56□□□□□ -1.84
SMARCAD1-203ENST00000394961 ERG28Q9UKR5 140 aa3.56□□□□□ -1.84
SMARCAD1-203ENST00000394961 A0A096LNJ9 63 aa3.56□□□□□ -1.84
SMARCAD1-203ENST00000394961 ZNF22P17026 224 aaPredicted RBP3.56□□□□□ -1.84
SMARCAD1-203ENST00000394961 KCNQ1DNQ9H478 68 aa3.56□□□□□ -1.84
SMARCAD1-203ENST00000394961 SND1-IT1Q9HBX3 110 aa3.56□□□□□ -1.84
SMARCAD1-203ENST00000394961 IGKV2D-26A0A0A0MRZ7 120 aa3.55□□□□□ -1.84
SMARCAD1-203ENST00000394961 LOC389332A0A1B0GUA5 103 aa3.55□□□□□ -1.84
SMARCAD1-203ENST00000394961 FAM19A2Q8N3H0 131 aa3.55□□□□□ -1.84
SMARCAD1-203ENST00000394961 XAGE1AQ9HD64 81 aa3.55□□□□□ -1.84
SMARCAD1-203ENST00000394961 LINC00587B1AMM8 73 aa3.55□□□□□ -1.84
SMARCAD1-203ENST00000394961 SPINK1P00995 79 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms