RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 RMI2Q96E14 147 aa4.1□□□□□ -1.75
RFFL-202ENST00000394597 TRBV10-1A0A0K0K1A3 114 aa4.1□□□□□ -1.75
RFFL-202ENST00000394597 MIFP14174 115 aa4.1□□□□□ -1.75
RFFL-202ENST00000394597 GYPEP15421 78 aa4.1□□□□□ -1.75
RFFL-202ENST00000394597 FHL2Q14192 279 aa4.1□□□□□ -1.75
RFFL-202ENST00000394597 Q6ZTI0 123 aa4.1□□□□□ -1.75
RFFL-202ENST00000394597 KRTAP1-3Q8IUG1 177 aa4.1□□□□□ -1.75
RFFL-202ENST00000394597 A0A096LPF7 62 aa4.1□□□□□ -1.75
RFFL-202ENST00000394597 LINC00482Q8N8I6 264 aa4.1□□□□□ -1.75
RFFL-202ENST00000394597 SMIM11BQ8TCY0 68 aa4.1□□□□□ -1.75
RFFL-202ENST00000394597 LINC00467Q9BRT7 94 aa4.1□□□□□ -1.75
RFFL-202ENST00000394597 WFDC10AQ9H1F0 79 aa4.1□□□□□ -1.75
RFFL-202ENST00000394597 IGSF10Q6WRI0 2623 aa4.09□□□□□ -1.75
RFFL-202ENST00000394597 CCKP06307 115 aa4.09□□□□□ -1.75
RFFL-202ENST00000394597 DMXL1Q9Y485 3027 aa4.09□□□□□ -1.75
RFFL-202ENST00000394597 DMXL2Q8TDJ6 3036 aa4.09□□□□□ -1.75
RFFL-202ENST00000394597 LRCOL1A6NCL2 159 aa4.09□□□□□ -1.75
RFFL-202ENST00000394597 DEFB4AO15263 64 aa4.09□□□□□ -1.75
RFFL-202ENST00000394597 NREPQ16612 68 aa4.08□□□□□ -1.76
RFFL-202ENST00000394597 PRO0255Q9UI72 69 aa4.08□□□□□ -1.76
RFFL-202ENST00000394597 HECTD1Q9ULT8 2610 aa4.08□□□□□ -1.76
RFFL-202ENST00000394597 LYRM9A8MSI8 78 aa4.08□□□□□ -1.76
RFFL-202ENST00000394597 PRM2P04554 102 aa4.08□□□□□ -1.76
RFFL-202ENST00000394597 A0A087WYN8 130 aa4.08□□□□□ -1.76
RFFL-202ENST00000394597 RPL28P46779 137 aaKnown RBP4.08□□□□□ -1.76
RFFL-202ENST00000394597 CENPEQ02224 2701 aa4.07□□□□□ -1.76
RFFL-202ENST00000394597 UBE2D4Q9Y2X8 147 aa4.07□□□□□ -1.76
RFFL-202ENST00000394597 MUC4Q99102 2169 aa4.07□□□□□ -1.76
RFFL-202ENST00000394597 PDE6GP18545 87 aa4.07□□□□□ -1.76
RFFL-202ENST00000394597 ANGP03950 147 aaKnown RBP4.07□□□□□ -1.76
RFFL-202ENST00000394597 FRYQ5TBA9 3013 aa4.07□□□□□ -1.76
RFFL-202ENST00000394597 FAM19A3Q7Z5A8 133 aa4.06□□□□□ -1.76
RFFL-202ENST00000394597 C1orf158Q8N1D5 194 aa4.06□□□□□ -1.76
RFFL-202ENST00000394597 TRBV6-4A0A1B0GX49 114 aa4.06□□□□□ -1.76
RFFL-202ENST00000394597 LINC01561Q8N1V8 128 aa4.06□□□□□ -1.76
RFFL-202ENST00000394597 Q8N3U1 123 aa4.06□□□□□ -1.76
RFFL-202ENST00000394597 C2orf48Q96LS8 159 aa4.06□□□□□ -1.76
RFFL-202ENST00000394597 AMELXQ99217 191 aa4.06□□□□□ -1.76
RFFL-202ENST00000394597 FREM2Q5SZK8 3169 aa4.06□□□□□ -1.76
RFFL-202ENST00000394597 CFAP46Q8IYW2 2715 aa4.06□□□□□ -1.76
RFFL-202ENST00000394597 PSPHP1O15172 72 aa4.06□□□□□ -1.76
RFFL-202ENST00000394597 CLPSL2Q6UWE3 100 aa4.06□□□□□ -1.76
RFFL-202ENST00000394597 HELZ2Q9BYK8 2649 aaKnown RBP4.06□□□□□ -1.76
RFFL-202ENST00000394597 BOD1L1Q8NFC6 3051 aa4.05□□□□□ -1.76
RFFL-202ENST00000394597 IGHV4-28A0A0C4DH34 117 aa4.05□□□□□ -1.76
RFFL-202ENST00000394597 ESRGQ1W209 222 aa4.05□□□□□ -1.76
RFFL-202ENST00000394597 BEAN1Q3B7T3 259 aa4.05□□□□□ -1.76
RFFL-202ENST00000394597 PRR4Q16378 134 aa4.05□□□□□ -1.76
RFFL-202ENST00000394597 FAM218AQ96MZ4 157 aa4.05□□□□□ -1.76
RFFL-202ENST00000394597 IL17DQ8TAD2 202 aa4.05□□□□□ -1.76
RFFL-202ENST00000394597 BPY2O14599 106 aa4.04□□□□□ -1.76
RFFL-202ENST00000394597 IGHV4-30-4P0DP06 118 aa4.04□□□□□ -1.76
RFFL-202ENST00000394597 KRTAP1-1Q07627 177 aa4.04□□□□□ -1.76
RFFL-202ENST00000394597 TMEM254Q8TBM7 123 aa4.04□□□□□ -1.76
RFFL-202ENST00000394597 LINC00474Q9P2X8 69 aa4.04□□□□□ -1.76
RFFL-202ENST00000394597 HIGD2BQ4VC39 106 aa4.04□□□□□ -1.76
RFFL-202ENST00000394597 C6orf99Q4VX62 202 aa4.04□□□□□ -1.76
RFFL-202ENST00000394597 IBA57-AS1B1ANH7 110 aa4.04□□□□□ -1.76
RFFL-202ENST00000394597 ZNF561-AS1K7EIQ3 104 aa4.04□□□□□ -1.76
RFFL-202ENST00000394597 CCL18P55774 89 aa4.04□□□□□ -1.76
RFFL-202ENST00000394597 C11orf45Q8TAV5 145 aa4.04□□□□□ -1.76
RFFL-202ENST00000394597 A0A087WZ39 114 aa4.03□□□□□ -1.76
RFFL-202ENST00000394597 LINC00242Q5T6M2 205 aa4.03□□□□□ -1.76
RFFL-202ENST00000394597 ITPR3Q14573 2671 aa4.03□□□□□ -1.76
RFFL-202ENST00000394597 SMIM1B2RUZ4 78 aa4.03□□□□□ -1.76
RFFL-202ENST00000394597 CHKB-CPT1BH3BT56 60 aa4.03□□□□□ -1.76
RFFL-202ENST00000394597 PRYO14603 147 aa4.03□□□□□ -1.76
RFFL-202ENST00000394597 EIF4EBP3O60516 100 aaPredicted RBP4.03□□□□□ -1.76
RFFL-202ENST00000394597 KIF25-AS1Q9Y6Z4 181 aa4.03□□□□□ -1.76
RFFL-202ENST00000394597 TRBV10-3A0A0K0K1G6 114 aa4.03□□□□□ -1.76
RFFL-202ENST00000394597 MP68P56378 58 aa4.03□□□□□ -1.76
RFFL-202ENST00000394597 Q5XG85 94 aa4.03□□□□□ -1.76
RFFL-202ENST00000394597 NTM-AS1Q6ZSK4 140 aa4.03□□□□□ -1.76
RFFL-202ENST00000394597 LITAFQ99732 161 aa4.03□□□□□ -1.76
RFFL-202ENST00000394597 FLNAP21333 2647 aaKnown RBP4.03□□□□□ -1.76
RFFL-202ENST00000394597 H3BQ85 93 aa4.03□□□□□ -1.76
RFFL-202ENST00000394597 COX6A2Q02221 97 aa4.03□□□□□ -1.76
RFFL-202ENST00000394597 LINC00337Q8N6G1 96 aa4.03□□□□□ -1.76
RFFL-202ENST00000394597 SETXQ7Z333 2677 aaKnown RBP4.02□□□□□ -1.77
RFFL-202ENST00000394597 CFAP47Q6ZTR5 3102 aa4.02□□□□□ -1.77
RFFL-202ENST00000394597 DEFB105AQ8NG35 78 aa4.02□□□□□ -1.77
RFFL-202ENST00000394597 TRBV6-8A0A0A6YYG3 113 aa4.02□□□□□ -1.77
RFFL-202ENST00000394597 A6NED7 52 aa4.02□□□□□ -1.77
RFFL-202ENST00000394597 LINC01547P58512 204 aaPredicted RBP4.02□□□□□ -1.77
RFFL-202ENST00000394597 LINC00315P59091 139 aa4.02□□□□□ -1.77
RFFL-202ENST00000394597 Q6ZQY7 126 aa4.02□□□□□ -1.77
RFFL-202ENST00000394597 LINC01600Q96MT4 127 aa4.02□□□□□ -1.77
RFFL-202ENST00000394597 CYSTM1Q9H1C7 97 aa4.01□□□□□ -1.77
RFFL-202ENST00000394597 UBE2BP63146 152 aa4.01□□□□□ -1.77
RFFL-202ENST00000394597 Q8N814 137 aa4.01□□□□□ -1.77
RFFL-202ENST00000394597 IGLV10-54A0A075B6I4 117 aa4.01□□□□□ -1.77
RFFL-202ENST00000394597 PLAC8L1A1L4L8 177 aa4.01□□□□□ -1.77
RFFL-202ENST00000394597 NANOS2P60321 138 aaKnown RBP4.01□□□□□ -1.77
RFFL-202ENST00000394597 KRTAP24-1Q3LI83 254 aa4.01□□□□□ -1.77
RFFL-202ENST00000394597 Q6ZVQ6 151 aa4.01□□□□□ -1.77
RFFL-202ENST00000394597 ZNF575Q86XF7 245 aa4.01□□□□□ -1.77
RFFL-202ENST00000394597 ZFHX4Q86UP3 3567 aa4□□□□□ -1.77
RFFL-202ENST00000394597 IGKV2D-24A0A075B6R9 120 aa4□□□□□ -1.77
RFFL-202ENST00000394597 DEFB131BA0A096LNP1 70 aa4□□□□□ -1.77
RFFL-202ENST00000394597 LOC100131303A0A0U1RQF7 123 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms