RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 CXorf51AA0A1B0GTR3 108 aa2.32□□□□□ -2.04
XRN1-202ENST00000392981 K7EMI3 77 aa2.32□□□□□ -2.04
XRN1-202ENST00000392981 DEFB121Q5J5C9 76 aa2.32□□□□□ -2.04
XRN1-202ENST00000392981 MINOS1Q5TGZ0 78 aa2.32□□□□□ -2.04
XRN1-202ENST00000392981 SPINK14Q6IE38 97 aa2.32□□□□□ -2.04
XRN1-202ENST00000392981 LINC00269Q8N2A0 174 aa2.32□□□□□ -2.04
XRN1-202ENST00000392981 C15orf56Q8N910 161 aa2.32□□□□□ -2.04
XRN1-202ENST00000392981 MRPL36Q9P0J6 103 aaKnown RBP2.32□□□□□ -2.04
XRN1-202ENST00000392981 IGKV2-28A0A075B6P5 120 aa2.32□□□□□ -2.04
XRN1-202ENST00000392981 IGKV2D-28P01615 120 aa2.32□□□□□ -2.04
XRN1-202ENST00000392981 Q86TA4 180 aa2.32□□□□□ -2.04
XRN1-202ENST00000392981 WFDC10BQ8IUB3 73 aa2.32□□□□□ -2.04
XRN1-202ENST00000392981 Q8TAT8 98 aa2.32□□□□□ -2.04
XRN1-202ENST00000392981 KLF14Q8TD94 323 aaPredicted RBP2.32□□□□□ -2.04
XRN1-202ENST00000392981 CASP8AP2Q9UKL3 1982 aa2.32□□□□□ -2.04
XRN1-202ENST00000392981 IGLV4-60A0A075B6I1 120 aa2.32□□□□□ -2.04
XRN1-202ENST00000392981 MIFP14174 115 aa2.32□□□□□ -2.04
XRN1-202ENST00000392981 CCL3L1P16619 93 aa2.32□□□□□ -2.04
XRN1-202ENST00000392981 EFNA4P52798 201 aa2.32□□□□□ -2.04
XRN1-202ENST00000392981 RALGAPA2Q2PPJ7 1873 aa2.31□□□□□ -2.04
XRN1-202ENST00000392981 LRCOL1A6NCL2 159 aa2.31□□□□□ -2.04
XRN1-202ENST00000392981 UBE2D3P61077 147 aa2.31□□□□□ -2.04
XRN1-202ENST00000392981 MYO9BQ13459 2157 aa2.31□□□□□ -2.04
XRN1-202ENST00000392981 BDP1A6H8Y1 2624 aa2.31□□□□□ -2.04
XRN1-202ENST00000392981 KIAA1549Q9HCM3 1950 aa2.31□□□□□ -2.04
XRN1-202ENST00000392981 RNASE3P12724 160 aaKnown RBP2.31□□□□□ -2.04
XRN1-202ENST00000392981 MRGPRG-AS1Q2M3A8 158 aa2.31□□□□□ -2.04
XRN1-202ENST00000392981 Q6ZQY7 126 aa2.31□□□□□ -2.04
XRN1-202ENST00000392981 TMEM14CQ9P0S9 112 aa2.31□□□□□ -2.04
XRN1-202ENST00000392981 FAM186AA6NE01 2351 aa2.31□□□□□ -2.04
XRN1-202ENST00000392981 ESPL1Q14674 2120 aa2.31□□□□□ -2.04
XRN1-202ENST00000392981 HEATR5AQ86XA9 2040 aa2.31□□□□□ -2.04
XRN1-202ENST00000392981 PATE2Q6UY27 113 aa2.31□□□□□ -2.04
XRN1-202ENST00000392981 C5orf38Q86SI9 138 aa2.31□□□□□ -2.04
XRN1-202ENST00000392981 CCL4L1Q8NHW4 92 aa2.31□□□□□ -2.04
XRN1-202ENST00000392981 V9GYV3 84 aa2.31□□□□□ -2.04
XRN1-202ENST00000392981 PTPRDP23468 1912 aa2.31□□□□□ -2.04
XRN1-202ENST00000392981 A0A1W2PPR1 153 aa2.31□□□□□ -2.04
XRN1-202ENST00000392981 DEFB113Q30KQ7 82 aa2.31□□□□□ -2.04
XRN1-202ENST00000392981 FP248Q71RG6 208 aaPredicted RBP2.31□□□□□ -2.04
XRN1-202ENST00000392981 CACNA1BQ00975 2339 aa2.3□□□□□ -2.04
XRN1-202ENST00000392981 FAM215AQ9Y5M1 114 aa2.3□□□□□ -2.04
XRN1-202ENST00000392981 NDUFA4O00483 81 aa2.3□□□□□ -2.04
XRN1-202ENST00000392981 COX7BP24311 80 aa2.3□□□□□ -2.04
XRN1-202ENST00000392981 DSCAML1Q8TD84 2053 aa2.3□□□□□ -2.04
XRN1-202ENST00000392981 TRBV6-8A0A0A6YYG3 113 aa2.3□□□□□ -2.04
XRN1-202ENST00000392981 TRBV7-1A0A0A6YYK4 115 aa2.3□□□□□ -2.04
XRN1-202ENST00000392981 KRTAP29-1A8MX34 341 aaPredicted RBP2.3□□□□□ -2.04
XRN1-202ENST00000392981 GAS8-AS1O95177 125 aa2.3□□□□□ -2.04
XRN1-202ENST00000392981 IGLV6-57P01721 117 aa2.3□□□□□ -2.04
XRN1-202ENST00000392981 CISD3P0C7P0 127 aa2.3□□□□□ -2.04
XRN1-202ENST00000392981 MIR22HGQ0VDD5 57 aa2.3□□□□□ -2.04
XRN1-202ENST00000392981 ZGRF1Q86YA3 2104 aa2.3□□□□□ -2.04
XRN1-202ENST00000392981 LIMD2Q9BT23 127 aa2.3□□□□□ -2.04
XRN1-202ENST00000392981 HEATR5BQ9P2D3 2071 aa2.3□□□□□ -2.04
XRN1-202ENST00000392981 PLXNB1O43157 2135 aa2.29□□□□□ -2.04
XRN1-202ENST00000392981 SPTY2D1-AS1A0A0U1RR47 76 aa2.29□□□□□ -2.04
XRN1-202ENST00000392981 ST20-AS1Q8NBB2 130 aa2.29□□□□□ -2.04
XRN1-202ENST00000392981 USMG5Q96IX5 58 aa2.29□□□□□ -2.04
XRN1-202ENST00000392981 CEP250Q9BV73 2442 aa2.29□□□□□ -2.04
XRN1-202ENST00000392981 OTOGLQ3ZCN5 2332 aa2.29□□□□□ -2.04
XRN1-202ENST00000392981 PKDREJQ9NTG1 2253 aa2.29□□□□□ -2.04
XRN1-202ENST00000392981 NDUFA1O15239 70 aa2.29□□□□□ -2.04
XRN1-202ENST00000392981 C5orf56Q8N8D9 126 aa2.29□□□□□ -2.04
XRN1-202ENST00000392981 RHPN1-AS1Q9BWJ2 59 aa2.29□□□□□ -2.04
XRN1-202ENST00000392981 NUPR2A6NF83 97 aa2.29□□□□□ -2.04
XRN1-202ENST00000392981 DEFB131AP59861 70 aa2.29□□□□□ -2.04
XRN1-202ENST00000392981 IGFL3Q6UXB1 125 aa2.29□□□□□ -2.04
XRN1-202ENST00000392981 LHFPL6Q9Y693 200 aa2.29□□□□□ -2.04
XRN1-202ENST00000392981 KIAA2026Q5HYC2 2103 aa2.29□□□□□ -2.04
XRN1-202ENST00000392981 PTPRBP23467 1997 aa2.29□□□□□ -2.04
XRN1-202ENST00000392981 IGLV3-9A0A075B6K5 115 aa2.29□□□□□ -2.04
XRN1-202ENST00000392981 TRBV10-3A0A0K0K1G6 114 aa2.29□□□□□ -2.04
XRN1-202ENST00000392981 CCL4P13236 92 aa2.29□□□□□ -2.04
XRN1-202ENST00000392981 CLPSL2Q6UWE3 100 aa2.29□□□□□ -2.04
XRN1-202ENST00000392981 WFDC13Q8IUB5 93 aa2.29□□□□□ -2.04
XRN1-202ENST00000392981 CCL19Q99731 98 aa2.29□□□□□ -2.04
XRN1-202ENST00000392981 CYSTM1Q9H1C7 97 aa2.29□□□□□ -2.04
XRN1-202ENST00000392981 DNAH1Q9P2D7 4330 aa2.29□□□□□ -2.04
XRN1-202ENST00000392981 MED12Q93074 2177 aa2.29□□□□□ -2.04
XRN1-202ENST00000392981 PLXNB3Q9ULL4 1909 aa2.29□□□□□ -2.04
XRN1-202ENST00000392981 IGLV2-18A0A075B6J9 118 aa2.28□□□□□ -2.04
XRN1-202ENST00000392981 PCNX2A6NKB5 2137 aa2.28□□□□□ -2.04
XRN1-202ENST00000392981 E7EQL1 145 aa2.28□□□□□ -2.04
XRN1-202ENST00000392981 C4orf3Q8WVX3 66 aa2.28□□□□□ -2.04
XRN1-202ENST00000392981 TTTY12Q9BZ98 90 aa2.28□□□□□ -2.04
XRN1-202ENST00000392981 CCL26Q9Y258 94 aa2.28□□□□□ -2.04
XRN1-202ENST00000392981 NCR3O14931 201 aa2.28□□□□□ -2.04
XRN1-202ENST00000392981 PI4KAP42356 2102 aa2.28□□□□□ -2.04
XRN1-202ENST00000392981 NOTCH3Q9UM47 2321 aa2.28□□□□□ -2.04
XRN1-202ENST00000392981 F5P12259 2224 aa2.28□□□□□ -2.04
XRN1-202ENST00000392981 DNHD1Q96M86 4753 aa2.28□□□□□ -2.04
XRN1-202ENST00000392981 KMT2BQ9UMN6 2715 aaPredicted RBP2.28□□□□□ -2.04
XRN1-202ENST00000392981 NDUFA11Q86Y39 141 aa2.28□□□□□ -2.04
XRN1-202ENST00000392981 LINC00208Q96KT6 92 aa2.28□□□□□ -2.04
XRN1-202ENST00000392981 MDC1Q14676 2089 aaKnown RBP2.28□□□□□ -2.04
XRN1-202ENST00000392981 MXRA5Q9NR99 2828 aa2.28□□□□□ -2.05
XRN1-202ENST00000392981 CCKP06307 115 aa2.27□□□□□ -2.05
XRN1-202ENST00000392981 SPINK13Q1W4C9 94 aa2.27□□□□□ -2.05
XRN1-202ENST00000392981 DSCAMO60469 2012 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms