RNA–Protein interactions for RNA: ENST00000391993.7

TRAF3IP1-202, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,003 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-202ENST00000391993 GNLYP22749 145 aa12.16□□□□□ -0.46
TRAF3IP1-202ENST00000391993 A6NDX4 124 aa12.16□□□□□ -0.46
TRAF3IP1-202ENST00000391993 Q6ZQY7 126 aa12.16□□□□□ -0.46
TRAF3IP1-202ENST00000391993 MAP6D1Q9H9H5 199 aa12.16□□□□□ -0.46
TRAF3IP1-202ENST00000391993 GYPEP15421 78 aa12.15□□□□□ -0.47
TRAF3IP1-202ENST00000391993 SMIM26A0A096LP01 95 aa12.14□□□□□ -0.47
TRAF3IP1-202ENST00000391993 DEFB4AO15263 64 aa12.14□□□□□ -0.47
TRAF3IP1-202ENST00000391993 IGLV4-60A0A075B6I1 120 aa12.14□□□□□ -0.47
TRAF3IP1-202ENST00000391993 XAGE1AQ9HD64 81 aa12.14□□□□□ -0.47
TRAF3IP1-202ENST00000391993 NBEAL2Q6ZNJ1 2754 aa12.13□□□□□ -0.47
TRAF3IP1-202ENST00000391993 TRBV10-1A0A0K0K1A3 114 aa12.13□□□□□ -0.47
TRAF3IP1-202ENST00000391993 SERP1Q9Y6X1 66 aa12.13□□□□□ -0.47
TRAF3IP1-202ENST00000391993 Q8N3U1 123 aa12.13□□□□□ -0.47
TRAF3IP1-202ENST00000391993 C2orf48Q96LS8 159 aa12.13□□□□□ -0.47
TRAF3IP1-202ENST00000391993 PRO0628Q9UI54 55 aa12.13□□□□□ -0.47
TRAF3IP1-202ENST00000391993 PLA2G2AP14555 144 aa12.12□□□□□ -0.47
TRAF3IP1-202ENST00000391993 Q8N9L7 120 aa12.12□□□□□ -0.47
TRAF3IP1-202ENST00000391993 RELNP78509 3460 aa12.12□□□□□ -0.47
TRAF3IP1-202ENST00000391993 ANKRD17O75179 2603 aaKnown RBP12.12□□□□□ -0.47
TRAF3IP1-202ENST00000391993 IBA57-AS1B1ANH7 110 aa12.12□□□□□ -0.47
TRAF3IP1-202ENST00000391993 K7ENP7 123 aa12.12□□□□□ -0.47
TRAF3IP1-202ENST00000391993 NREPQ16612 68 aa12.11□□□□□ -0.47
TRAF3IP1-202ENST00000391993 LINC00474Q9P2X8 69 aa12.11□□□□□ -0.47
TRAF3IP1-202ENST00000391993 Q96MF0 132 aa12.11□□□□□ -0.47
TRAF3IP1-202ENST00000391993 WFDC10AQ9H1F0 79 aa12.11□□□□□ -0.47
TRAF3IP1-202ENST00000391993 SVEP1Q4LDE5 3571 aa12.11□□□□□ -0.47
TRAF3IP1-202ENST00000391993 CELA1Q9UNI1 258 aa12.1□□□□□ -0.47
TRAF3IP1-202ENST00000391993 COL27A1Q8IZC6 1860 aaPredicted RBP12.1□□□□□ -0.47
TRAF3IP1-202ENST00000391993 C3orf84H3BNL1 204 aa12.1□□□□□ -0.47
TRAF3IP1-202ENST00000391993 C11orf71Q6IPW1 123 aa12.1□□□□□ -0.47
TRAF3IP1-202ENST00000391993 NANOS2P60321 138 aaKnown RBP12.1□□□□□ -0.47
TRAF3IP1-202ENST00000391993 UCNP55089 124 aa12.09□□□□□ -0.47
TRAF3IP1-202ENST00000391993 ZNF843Q8N446 348 aa12.09□□□□□ -0.47
TRAF3IP1-202ENST00000391993 FUSP35637 526 aaKnown RBP eCLIP12.08□□□□□ -0.47
TRAF3IP1-202ENST00000391993 ATP5EP2Q5VTU8 51 aa12.08□□□□□ -0.47
TRAF3IP1-202ENST00000391993 IGKV2-28A0A075B6P5 120 aa12.08□□□□□ -0.48
TRAF3IP1-202ENST00000391993 TRAV7A0A075B6U4 112 aa12.08□□□□□ -0.48
TRAF3IP1-202ENST00000391993 IGKV2D-28P01615 120 aa12.08□□□□□ -0.48
TRAF3IP1-202ENST00000391993 ITPR1Q14643 2758 aa12.08□□□□□ -0.48
TRAF3IP1-202ENST00000391993 IGLV5-39A0A0G2JS06 123 aa12.08□□□□□ -0.48
TRAF3IP1-202ENST00000391993 AVPP01185 164 aa12.08□□□□□ -0.48
TRAF3IP1-202ENST00000391993 Q8N814 137 aa12.08□□□□□ -0.48
TRAF3IP1-202ENST00000391993 MIFP14174 115 aa12.07□□□□□ -0.48
TRAF3IP1-202ENST00000391993 NTM-AS1Q6ZSK4 140 aa12.07□□□□□ -0.48
TRAF3IP1-202ENST00000391993 TRAV10A0A0B4J240 114 aa12.07□□□□□ -0.48
TRAF3IP1-202ENST00000391993 TRBV7-6A0A0J9YX20 115 aa12.07□□□□□ -0.48
TRAF3IP1-202ENST00000391993 TRBV6-4A0A1B0GX49 114 aa12.07□□□□□ -0.48
TRAF3IP1-202ENST00000391993 A0A087WZ39 114 aa12.06□□□□□ -0.48
TRAF3IP1-202ENST00000391993 SPTSSBQ8NFR3 76 aa12.05□□□□□ -0.48
TRAF3IP1-202ENST00000391993 IGLV1-40P01703 118 aa12.05□□□□□ -0.48
TRAF3IP1-202ENST00000391993 OXTP01178 125 aa12.03□□□□□ -0.48
TRAF3IP1-202ENST00000391993 GCN1Q92616 2671 aaKnown RBP12.03□□□□□ -0.48
TRAF3IP1-202ENST00000391993 TMEM89A2RUT3 159 aa12.03□□□□□ -0.48
TRAF3IP1-202ENST00000391993 PSPHP1O15172 72 aa12.02□□□□□ -0.48
TRAF3IP1-202ENST00000391993 TRBV6-8A0A0A6YYG3 113 aa12.02□□□□□ -0.49
TRAF3IP1-202ENST00000391993 ZNF292O60281 2723 aa12.02□□□□□ -0.49
TRAF3IP1-202ENST00000391993 LINC01547P58512 204 aaPredicted RBP12.02□□□□□ -0.49
TRAF3IP1-202ENST00000391993 SPAG11BQ08648 103 aa12.02□□□□□ -0.49
TRAF3IP1-202ENST00000391993 C11orf72Q8NBR9 251 aa12.02□□□□□ -0.49
TRAF3IP1-202ENST00000391993 Q6ZVQ6 151 aa12.02□□□□□ -0.49
TRAF3IP1-202ENST00000391993 LINC00959A0A1B0GUT2 108 aa12.01□□□□□ -0.49
TRAF3IP1-202ENST00000391993 ZNF561-AS1K7EIQ3 104 aa12□□□□□ -0.49
TRAF3IP1-202ENST00000391993 SEC61GP60059 68 aa12□□□□□ -0.49
TRAF3IP1-202ENST00000391993 BPY2O14599 106 aa12□□□□□ -0.49
TRAF3IP1-202ENST00000391993 TM2D3Q9BRN9 247 aa12□□□□□ -0.49
TRAF3IP1-202ENST00000391993 FBXL19-AS1Q494R0 122 aa11.99□□□□□ -0.49
TRAF3IP1-202ENST00000391993 LINC01356Q8N9X3 169 aa11.99□□□□□ -0.49
TRAF3IP1-202ENST00000391993 DIRC1Q969H9 104 aa11.99□□□□□ -0.49
TRAF3IP1-202ENST00000391993 FAM30AQ9NZY2 134 aa11.98□□□□□ -0.49
TRAF3IP1-202ENST00000391993 KLK12Q9UKR0 248 aa11.98□□□□□ -0.49
TRAF3IP1-202ENST00000391993 DEFB114Q30KQ6 69 aa11.98□□□□□ -0.49
TRAF3IP1-202ENST00000391993 HIGD2BQ4VC39 106 aa11.98□□□□□ -0.49
TRAF3IP1-202ENST00000391993 CHCHD10Q8WYQ3 142 aaPredicted RBP11.97□□□□□ -0.49
TRAF3IP1-202ENST00000391993 CCL24O00175 119 aa11.96□□□□□ -0.49
TRAF3IP1-202ENST00000391993 IGLV5-45A0A087WSX0 123 aa11.96□□□□□ -0.5
TRAF3IP1-202ENST00000391993 C1orf158Q8N1D5 194 aa11.96□□□□□ -0.5
TRAF3IP1-202ENST00000391993 USP24Q9UPU5 2620 aa11.96□□□□□ -0.5
TRAF3IP1-202ENST00000391993 TMEM254Q8TBM7 123 aa11.95□□□□□ -0.5
TRAF3IP1-202ENST00000391993 BEAN1Q3B7T3 259 aa11.94□□□□□ -0.5
TRAF3IP1-202ENST00000391993 UNQ6190/PRO20217Q6UXQ8 127 aa11.94□□□□□ -0.5
TRAF3IP1-202ENST00000391993 FAM104AQ969W3 186 aa11.94□□□□□ -0.5
TRAF3IP1-202ENST00000391993 C16orf74Q96GX8 76 aa11.94□□□□□ -0.5
TRAF3IP1-202ENST00000391993 FAM19A3Q7Z5A8 133 aa11.94□□□□□ -0.5
TRAF3IP1-202ENST00000391993 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.93□□□□□ -0.5
TRAF3IP1-202ENST00000391993 Q5XG85 94 aa11.93□□□□□ -0.5
TRAF3IP1-202ENST00000391993 COX7BP24311 80 aa11.92□□□□□ -0.5
TRAF3IP1-202ENST00000391993 ODF3L2Q3SX64 289 aa11.92□□□□□ -0.5
TRAF3IP1-202ENST00000391993 C6orf223Q8N319 242 aa11.91□□□□□ -0.5
TRAF3IP1-202ENST00000391993 REG3AQ06141 175 aa11.91□□□□□ -0.5
TRAF3IP1-202ENST00000391993 CAMK2N2Q96S95 79 aa11.91□□□□□ -0.5
TRAF3IP1-202ENST00000391993 CR1P17927 2039 aa11.91□□□□□ -0.5
TRAF3IP1-202ENST00000391993 IGHV3OR16-9A0A0B4J2B5 98 aa11.9□□□□□ -0.5
TRAF3IP1-202ENST00000391993 H7BZZ5 65 aa11.9□□□□□ -0.5
TRAF3IP1-202ENST00000391993 BBC3Q96PG8 261 aaPredicted RBP11.89□□□□□ -0.51
TRAF3IP1-202ENST00000391993 NDUFC1O43677 76 aa11.89□□□□□ -0.51
TRAF3IP1-202ENST00000391993 NKAPP1Q8N9T2 125 aa11.89□□□□□ -0.51
TRAF3IP1-202ENST00000391993 HIGD2AQ9BW72 106 aa11.89□□□□□ -0.51
TRAF3IP1-202ENST00000391993 RETNQ9HD89 108 aa11.89□□□□□ -0.51
TRAF3IP1-202ENST00000391993 M0R2N4 97 aa11.89□□□□□ -0.51
TRAF3IP1-202ENST00000391993 LINC01006Q8NI28 216 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms