RNA–Protein interactions for RNA: ENST00000380701.7

CCDC171-201, Transcript of coiled-coil domain containing 171, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC171, Length 6,512 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-201ENST00000380701 HRCT1Q6UXD1 115 aa5.06□□□□□ -1.6
CCDC171-201ENST00000380701 ABCA2Q9BZC7 2435 aa5.05□□□□□ -1.6
CCDC171-201ENST00000380701 PLA2G1BP04054 148 aaKnown RBP5.05□□□□□ -1.6
CCDC171-201ENST00000380701 C9orf116Q5BN46 136 aaPredicted RBP5.05□□□□□ -1.6
CCDC171-201ENST00000380701 KLK9Q2XQG4 91 aa5.05□□□□□ -1.6
CCDC171-201ENST00000380701 A8MZ25 164 aa5.04□□□□□ -1.6
CCDC171-201ENST00000380701 MYO9AB2RTY4 2548 aa5.04□□□□□ -1.6
CCDC171-201ENST00000380701 C11orf72Q8NBR9 251 aa5.04□□□□□ -1.6
CCDC171-201ENST00000380701 TP53AIP1Q9HCN2 124 aa5.04□□□□□ -1.6
CCDC171-201ENST00000380701 KRTAP24-1Q3LI83 254 aa5.04□□□□□ -1.6
CCDC171-201ENST00000380701 Q6ZRP5 223 aa5.03□□□□□ -1.6
CCDC171-201ENST00000380701 SPATA3Q8NHX4 192 aa5.03□□□□□ -1.6
CCDC171-201ENST00000380701 COX7CP15954 63 aa5.03□□□□□ -1.6
CCDC171-201ENST00000380701 NBDYA0A0U1RRE5 68 aa5.03□□□□□ -1.6
CCDC171-201ENST00000380701 LINC00575Q6W349 94 aa5.03□□□□□ -1.6
CCDC171-201ENST00000380701 TLN1Q9Y490 2541 aaKnown RBP5.03□□□□□ -1.6
CCDC171-201ENST00000380701 CRYGAP11844 174 aa5.03□□□□□ -1.6
CCDC171-201ENST00000380701 C2orf91Q6ZV80 131 aa5.03□□□□□ -1.6
CCDC171-201ENST00000380701 LINC00694P0DN24 101 aa5.02□□□□□ -1.61
CCDC171-201ENST00000380701 Q6ZRU5 148 aa5.02□□□□□ -1.61
CCDC171-201ENST00000380701 IGHV6-1A0A0B4J1U7 121 aa5.02□□□□□ -1.61
CCDC171-201ENST00000380701 IGLV5-39A0A0G2JS06 123 aa5.02□□□□□ -1.61
CCDC171-201ENST00000380701 C22orf24Q9Y442 160 aa5.02□□□□□ -1.61
CCDC171-201ENST00000380701 PCNX3Q9H6A9 2034 aa5.02□□□□□ -1.61
CCDC171-201ENST00000380701 hDV103S1A0JD37 113 aa5.02□□□□□ -1.61
CCDC171-201ENST00000380701 SMCR5Q8TEV8 140 aa5.01□□□□□ -1.61
CCDC171-201ENST00000380701 SVIPQ8NHG7 77 aa5.01□□□□□ -1.61
CCDC171-201ENST00000380701 FAM19A4Q96LR4 140 aa5.01□□□□□ -1.61
CCDC171-201ENST00000380701 DOPEY1Q5JWR5 2465 aa5.01□□□□□ -1.61
CCDC171-201ENST00000380701 A0A087WSZ3 146 aa5□□□□□ -1.61
CCDC171-201ENST00000380701 BCE1O60756 84 aa5□□□□□ -1.61
CCDC171-201ENST00000380701 FAM30AQ9NZY2 134 aa5□□□□□ -1.61
CCDC171-201ENST00000380701 PRM2P04554 102 aa5□□□□□ -1.61
CCDC171-201ENST00000380701 Q8NBF4 154 aa5□□□□□ -1.61
CCDC171-201ENST00000380701 IGHV3OR16-9A0A0B4J2B5 98 aa5□□□□□ -1.61
CCDC171-201ENST00000380701 LINC01546A6NGU7 62 aa5□□□□□ -1.61
CCDC171-201ENST00000380701 MT-ATP8P03928 68 aa5□□□□□ -1.61
CCDC171-201ENST00000380701 LINC00208Q96KT6 92 aa4.99□□□□□ -1.61
CCDC171-201ENST00000380701 SMIM26A0A096LP01 95 aa4.99□□□□□ -1.61
CCDC171-201ENST00000380701 H3BPC8 53 aa4.99□□□□□ -1.61
CCDC171-201ENST00000380701 CXCL6P80162 114 aa4.99□□□□□ -1.61
CCDC171-201ENST00000380701 A6NED7 52 aa4.99□□□□□ -1.61
CCDC171-201ENST00000380701 X6R8D5 127 aa4.99□□□□□ -1.61
CCDC171-201ENST00000380701 IGLV5-45A0A087WSX0 123 aa4.99□□□□□ -1.61
CCDC171-201ENST00000380701 CHD8Q9HCK8 2581 aa4.99□□□□□ -1.61
CCDC171-201ENST00000380701 HCG22E2RYF7 251 aa4.98□□□□□ -1.61
CCDC171-201ENST00000380701 C16orf90A8MZG2 172 aa4.98□□□□□ -1.61
CCDC171-201ENST00000380701 GVQW2A0A096LPI5 108 aaPredicted RBP4.98□□□□□ -1.61
CCDC171-201ENST00000380701 CELA1Q9UNI1 258 aa4.98□□□□□ -1.61
CCDC171-201ENST00000380701 LINC00336Q6ZUF6 198 aa4.97□□□□□ -1.61
CCDC171-201ENST00000380701 RTL8CO15255 209 aa4.97□□□□□ -1.61
CCDC171-201ENST00000380701 GAS8-AS1O95177 125 aa4.97□□□□□ -1.61
CCDC171-201ENST00000380701 LINC01547P58512 204 aaPredicted RBP4.97□□□□□ -1.61
CCDC171-201ENST00000380701 C2CD3Q4AC94 2353 aa4.97□□□□□ -1.61
CCDC171-201ENST00000380701 JMJD1CQ15652 2540 aa4.97□□□□□ -1.61
CCDC171-201ENST00000380701 PTPRSQ13332 1948 aa4.97□□□□□ -1.61
CCDC171-201ENST00000380701 DNAH10OSP0CZ25 163 aa4.97□□□□□ -1.61
CCDC171-201ENST00000380701 Q6ZSN1 163 aa4.97□□□□□ -1.61
CCDC171-201ENST00000380701 SBSPONQ8IVN8 264 aa4.97□□□□□ -1.61
CCDC171-201ENST00000380701 LINC00315P59091 139 aa4.96□□□□□ -1.61
CCDC171-201ENST00000380701 SPAG11AQ6PDA7 123 aa4.96□□□□□ -1.61
CCDC171-201ENST00000380701 C8orf87E5RJ46 101 aa4.96□□□□□ -1.62
CCDC171-201ENST00000380701 H0Y9P7 68 aa4.96□□□□□ -1.62
CCDC171-201ENST00000380701 Q8NAQ8 132 aa4.96□□□□□ -1.62
CCDC171-201ENST00000380701 LINC00167Q96N53 147 aa4.95□□□□□ -1.62
CCDC171-201ENST00000380701 URB1-AS1Q96HZ7 61 aa4.95□□□□□ -1.62
CCDC171-201ENST00000380701 A0A087WYN8 130 aa4.95□□□□□ -1.62
CCDC171-201ENST00000380701 MPLKIPQ8TAP9 179 aa4.95□□□□□ -1.62
CCDC171-201ENST00000380701 COL4A2P08572 1712 aa4.94□□□□□ -1.62
CCDC171-201ENST00000380701 TSPEAR-AS2P59090 65 aa4.94□□□□□ -1.62
CCDC171-201ENST00000380701 PRLHP81277 87 aa4.94□□□□□ -1.62
CCDC171-201ENST00000380701 TRBV7-7A0A0K0K1E9 115 aa4.94□□□□□ -1.62
CCDC171-201ENST00000380701 Q8N3U1 123 aa4.94□□□□□ -1.62
CCDC171-201ENST00000380701 ABCA12Q86UK0 2595 aa4.94□□□□□ -1.62
CCDC171-201ENST00000380701 J3QL48 77 aa4.94□□□□□ -1.62
CCDC171-201ENST00000380701 LRRK2Q5S007 2527 aa4.94□□□□□ -1.62
CCDC171-201ENST00000380701 ADAMTSL4-AS1Q5T5F5 129 aa4.94□□□□□ -1.62
CCDC171-201ENST00000380701 TYMSOSQ8TAI1 123 aa4.94□□□□□ -1.62
CCDC171-201ENST00000380701 ELOF1P60002 83 aaKnown RBP4.93□□□□□ -1.62
CCDC171-201ENST00000380701 ATG2AQ2TAZ0 1938 aa4.93□□□□□ -1.62
CCDC171-201ENST00000380701 KIAA1549Q9HCM3 1950 aa4.93□□□□□ -1.62
CCDC171-201ENST00000380701 Q6ZRX8 168 aa4.93□□□□□ -1.62
CCDC171-201ENST00000380701 C6orf48Q9UBA6 75 aa4.93□□□□□ -1.62
CCDC171-201ENST00000380701 SNURFQ9Y675 71 aa4.93□□□□□ -1.62
CCDC171-201ENST00000380701 A8MTW9 85 aa4.93□□□□□ -1.62
CCDC171-201ENST00000380701 ZFYVE26Q68DK2 2539 aa4.92□□□□□ -1.62
CCDC171-201ENST00000380701 RPL37AP61513 92 aaKnown RBP4.92□□□□□ -1.62
CCDC171-201ENST00000380701 LINC00588Q9Y4M8 146 aa4.92□□□□□ -1.62
CCDC171-201ENST00000380701 A0A096LNJ9 63 aa4.92□□□□□ -1.62
CCDC171-201ENST00000380701 MOBPQ13875 183 aa4.91□□□□□ -1.62
CCDC171-201ENST00000380701 PIEZO2Q9H5I5 2752 aa4.91□□□□□ -1.62
CCDC171-201ENST00000380701 PRR3P79522 188 aaKnown RBP4.91□□□□□ -1.62
CCDC171-201ENST00000380701 C19orf73Q9NVV2 129 aa4.91□□□□□ -1.62
CCDC171-201ENST00000380701 USP9XQ93008 2570 aaPredicted RBP4.91□□□□□ -1.62
CCDC171-201ENST00000380701 ACYP2P14621 99 aa4.9□□□□□ -1.62
CCDC171-201ENST00000380701 LINC00310P59036 64 aa4.9□□□□□ -1.62
CCDC171-201ENST00000380701 ATP11AUNQ6ZP68 121 aa4.9□□□□□ -1.62
CCDC171-201ENST00000380701 SSBP3-AS1Q7Z2R9 100 aa4.9□□□□□ -1.62
CCDC171-201ENST00000380701 SPACA4Q8TDM5 124 aa4.9□□□□□ -1.62
CCDC171-201ENST00000380701 RAI1Q7Z5J4 1906 aaPredicted RBP4.9□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms