RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 A0A096LNT2 108 aa14.38□□□□□ -0.11
TMEFF1-201ENST00000374879 BCE1O60756 84 aa14.38□□□□□ -0.11
TMEFF1-201ENST00000374879 TRGV1A0A0A0MS02 117 aa14.37□□□□□ -0.11
TMEFF1-201ENST00000374879 TRBV7-6A0A0J9YX20 115 aa14.37□□□□□ -0.11
TMEFF1-201ENST00000374879 RBM3P98179 157 aaKnown RBP14.36□□□□□ -0.11
TMEFF1-201ENST00000374879 PRR3P79522 188 aaKnown RBP14.36□□□□□ -0.11
TMEFF1-201ENST00000374879 BRK1Q8WUW1 75 aa14.36□□□□□ -0.11
TMEFF1-201ENST00000374879 A0A0U1RQV1 116 aa14.35□□□□□ -0.11
TMEFF1-201ENST00000374879 NANOS2P60321 138 aaKnown RBP14.35□□□□□ -0.11
TMEFF1-201ENST00000374879 C11orf68Q9H3H3 251 aaKnown RBP14.35□□□□□ -0.11
TMEFF1-201ENST00000374879 LINC01547P58512 204 aaPredicted RBP14.35□□□□□ -0.11
TMEFF1-201ENST00000374879 LINC00482Q8N8I6 264 aa14.35□□□□□ -0.11
TMEFF1-201ENST00000374879 M0R2N4 97 aa14.34□□□□□ -0.11
TMEFF1-201ENST00000374879 ACACBO00763 2458 aa14.34□□□□□ -0.11
TMEFF1-201ENST00000374879 HAMPP81172 84 aa14.33□□□□□ -0.11
TMEFF1-201ENST00000374879 IGHV3OR16-9A0A0B4J2B5 98 aa14.33□□□□□ -0.12
TMEFF1-201ENST00000374879 TRBV10-1A0A0K0K1A3 114 aa14.33□□□□□ -0.12
TMEFF1-201ENST00000374879 FAM208BQ5VWN6 2430 aa14.32□□□□□ -0.12
TMEFF1-201ENST00000374879 ANKRD17O75179 2603 aaKnown RBP14.32□□□□□ -0.12
TMEFF1-201ENST00000374879 UBE2E2Q96LR5 201 aa14.32□□□□□ -0.12
TMEFF1-201ENST00000374879 ZNF702PQ9H963 129 aa14.32□□□□□ -0.12
TMEFF1-201ENST00000374879 Q6ZQT0 140 aa14.31□□□□□ -0.12
TMEFF1-201ENST00000374879 INSP01308 110 aa14.31□□□□□ -0.12
TMEFF1-201ENST00000374879 IGLV4-60A0A075B6I1 120 aa14.3□□□□□ -0.12
TMEFF1-201ENST00000374879 DEFB136Q30KP8 78 aa14.29□□□□□ -0.12
TMEFF1-201ENST00000374879 FBN2P35556 2912 aa14.29□□□□□ -0.12
TMEFF1-201ENST00000374879 Q6YL49 198 aa14.28□□□□□ -0.12
TMEFF1-201ENST00000374879 SLURP1P55000 103 aa14.28□□□□□ -0.12
TMEFF1-201ENST00000374879 C1orf195Q5TG92 126 aa14.28□□□□□ -0.12
TMEFF1-201ENST00000374879 C18orf65Q6ZTR6 163 aa14.28□□□□□ -0.12
TMEFF1-201ENST00000374879 Q6ZVQ6 151 aa14.28□□□□□ -0.12
TMEFF1-201ENST00000374879 TM2D3Q9BRN9 247 aa14.28□□□□□ -0.12
TMEFF1-201ENST00000374879 A0A087WZ39 114 aa14.28□□□□□ -0.12
TMEFF1-201ENST00000374879 C6orf226Q5I0X4 101 aa14.28□□□□□ -0.12
TMEFF1-201ENST00000374879 MAP6D1Q9H9H5 199 aa14.27□□□□□ -0.13
TMEFF1-201ENST00000374879 MXRA5Q9NR99 2828 aa14.27□□□□□ -0.13
TMEFF1-201ENST00000374879 LOC100131303A0A0U1RQF7 123 aa14.27□□□□□ -0.13
TMEFF1-201ENST00000374879 LRRK2Q5S007 2527 aa14.26□□□□□ -0.13
TMEFF1-201ENST00000374879 SEC61GP60059 68 aa14.26□□□□□ -0.13
TMEFF1-201ENST00000374879 ZNF469Q96JG9 3925 aaPredicted RBP14.25□□□□□ -0.13
TMEFF1-201ENST00000374879 V9GYY9 64 aa14.25□□□□□ -0.13
TMEFF1-201ENST00000374879 Q8N3U1 123 aa14.25□□□□□ -0.13
TMEFF1-201ENST00000374879 ABCA12Q86UK0 2595 aa14.24□□□□□ -0.13
TMEFF1-201ENST00000374879 FSHBP01225 129 aa14.24□□□□□ -0.13
TMEFF1-201ENST00000374879 FAM229BQ4G0N7 80 aa14.24□□□□□ -0.13
TMEFF1-201ENST00000374879 IL17DQ8TAD2 202 aa14.24□□□□□ -0.13
TMEFF1-201ENST00000374879 NDUFC1O43677 76 aa14.23□□□□□ -0.13
TMEFF1-201ENST00000374879 IGHV4-31P0DP07 118 aa14.23□□□□□ -0.13
TMEFF1-201ENST00000374879 C1orf158Q8N1D5 194 aa14.23□□□□□ -0.13
TMEFF1-201ENST00000374879 MPLKIPQ8TAP9 179 aa14.23□□□□□ -0.13
TMEFF1-201ENST00000374879 TRBV7-4A0A0J9YYF1 115 aa14.22□□□□□ -0.13
TMEFF1-201ENST00000374879 LAMTOR3Q9UHA4 124 aa14.22□□□□□ -0.13
TMEFF1-201ENST00000374879 LOC110117498A0A087WWA1 95 aa14.22□□□□□ -0.13
TMEFF1-201ENST00000374879 MIFP14174 115 aa14.22□□□□□ -0.13
TMEFF1-201ENST00000374879 C6orf99Q4VX62 202 aa14.22□□□□□ -0.13
TMEFF1-201ENST00000374879 NBPF19A0A087WUL8 3843 aa14.21□□□□□ -0.13
TMEFF1-201ENST00000374879 PRB1P04280 392 aa14.21□□□□□ -0.14
TMEFF1-201ENST00000374879 TLN2Q9Y4G6 2542 aa14.21□□□□□ -0.14
TMEFF1-201ENST00000374879 PTPN13Q12923 2485 aa14.2□□□□□ -0.14
TMEFF1-201ENST00000374879 ZNF843Q8N446 348 aa14.2□□□□□ -0.14
TMEFF1-201ENST00000374879 SCXQ7RTU7 201 aa14.19□□□□□ -0.14
TMEFF1-201ENST00000374879 ZNF462Q96JM2 2506 aa14.19□□□□□ -0.14
TMEFF1-201ENST00000374879 KHDC1LQ5JSQ8 128 aa14.19□□□□□ -0.14
TMEFF1-201ENST00000374879 ATP5EP56381 51 aaPredicted RBP14.18□□□□□ -0.14
TMEFF1-201ENST00000374879 CXCL6P80162 114 aa14.18□□□□□ -0.14
TMEFF1-201ENST00000374879 ZNF561-AS1K7EIQ3 104 aa14.18□□□□□ -0.14
TMEFF1-201ENST00000374879 LINC00575Q6W349 94 aa14.18□□□□□ -0.14
TMEFF1-201ENST00000374879 CR1P17927 2039 aa14.18□□□□□ -0.14
TMEFF1-201ENST00000374879 C6orf223Q8N319 242 aa14.17□□□□□ -0.14
TMEFF1-201ENST00000374879 NOP10Q9NPE3 64 aaKnown RBP14.17□□□□□ -0.14
TMEFF1-201ENST00000374879 KRTAP10-9P60411 292 aa14.16□□□□□ -0.14
TMEFF1-201ENST00000374879 SPATA3Q8NHX4 192 aa14.16□□□□□ -0.14
TMEFF1-201ENST00000374879 NOTCH3Q9UM47 2321 aa14.15□□□□□ -0.14
TMEFF1-201ENST00000374879 LINC00959A0A1B0GUT2 108 aa14.15□□□□□ -0.14
TMEFF1-201ENST00000374879 TEX15Q9BXT5 2789 aa14.15□□□□□ -0.14
TMEFF1-201ENST00000374879 DYNLRB2Q8TF09 96 aa14.14□□□□□ -0.15
TMEFF1-201ENST00000374879 MYO9AB2RTY4 2548 aa14.14□□□□□ -0.15
TMEFF1-201ENST00000374879 NREPQ16612 68 aa14.14□□□□□ -0.15
TMEFF1-201ENST00000374879 TMEM254Q8TBM7 123 aa14.14□□□□□ -0.15
TMEFF1-201ENST00000374879 Q8NDZ9 215 aa14.13□□□□□ -0.15
TMEFF1-201ENST00000374879 C4orf3Q8WVX3 66 aa14.13□□□□□ -0.15
TMEFF1-201ENST00000374879 NAV2Q8IVL1 2488 aa14.12□□□□□ -0.15
TMEFF1-201ENST00000374879 TRBV6-8A0A0A6YYG3 113 aa14.12□□□□□ -0.15
TMEFF1-201ENST00000374879 Q8IZM0 81 aa14.11□□□□□ -0.15
TMEFF1-201ENST00000374879 TRGV2A0A075B6R0 118 aa14.1□□□□□ -0.15
TMEFF1-201ENST00000374879 C11orf44Q8N8P7 122 aa14.1□□□□□ -0.15
TMEFF1-201ENST00000374879 SETD2Q9BYW2 2564 aaPredicted RBP14.1□□□□□ -0.15
TMEFF1-201ENST00000374879 A0A1W2PRX2 142 aa14.1□□□□□ -0.15
TMEFF1-201ENST00000374879 DEFB114Q30KQ6 69 aa14.1□□□□□ -0.15
TMEFF1-201ENST00000374879 NF1P21359 2839 aa14.09□□□□□ -0.15
TMEFF1-201ENST00000374879 AKAP9Q99996 3911 aa14.09□□□□□ -0.15
TMEFF1-201ENST00000374879 DEFB113Q30KQ7 82 aa14.09□□□□□ -0.15
TMEFF1-201ENST00000374879 STHQ8IWL8 128 aa14.09□□□□□ -0.15
TMEFF1-201ENST00000374879 SONP18583 2426 aaKnown RBP14.09□□□□□ -0.15
TMEFF1-201ENST00000374879 BPY2O14599 106 aa14.08□□□□□ -0.16
TMEFF1-201ENST00000374879 ODF3L2Q3SX64 289 aa14.08□□□□□ -0.16
TMEFF1-201ENST00000374879 C9orf116Q5BN46 136 aaPredicted RBP14.08□□□□□ -0.16
TMEFF1-201ENST00000374879 C9orf66Q5T8R8 295 aa14.08□□□□□ -0.16
TMEFF1-201ENST00000374879 BBC3Q96PG8 261 aaPredicted RBP14.08□□□□□ -0.16
TMEFF1-201ENST00000374879 USP24Q9UPU5 2620 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms