RNA–Protein interactions for RNA: ENST00000374606.9

PFDN6-201, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN6, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-201ENST00000374606 Q8IZM0 81 aa11.54□□□□□ -0.56
PFDN6-201ENST00000374606 LRP1BQ9NZR2 4599 aa11.54□□□□□ -0.56
PFDN6-201ENST00000374606 J3QQQ9 107 aa11.53□□□□□ -0.56
PFDN6-201ENST00000374606 C16orf90A8MZG2 172 aa11.52□□□□□ -0.57
PFDN6-201ENST00000374606 ZNF561-AS1K7EIQ3 104 aa11.52□□□□□ -0.57
PFDN6-201ENST00000374606 TSPEAR-AS2P59090 65 aa11.52□□□□□ -0.57
PFDN6-201ENST00000374606 WFDC2Q14508 124 aa11.51□□□□□ -0.57
PFDN6-201ENST00000374606 C14orf177Q52M58 125 aa11.51□□□□□ -0.57
PFDN6-201ENST00000374606 C12orf57Q99622 126 aa11.51□□□□□ -0.57
PFDN6-201ENST00000374606 CXCL5P42830 114 aa11.5□□□□□ -0.57
PFDN6-201ENST00000374606 CKS1BP61024 79 aa11.5□□□□□ -0.57
PFDN6-201ENST00000374606 KIAA0087Q14695 138 aa11.5□□□□□ -0.57
PFDN6-201ENST00000374606 C6orf226Q5I0X4 101 aa11.5□□□□□ -0.57
PFDN6-201ENST00000374606 LRCOL1A6NCL2 159 aa11.49□□□□□ -0.57
PFDN6-201ENST00000374606 LINC00526Q96FQ7 95 aa11.49□□□□□ -0.57
PFDN6-201ENST00000374606 NDUFA12Q9UI09 145 aa11.49□□□□□ -0.57
PFDN6-201ENST00000374606 HERC1Q15751 4861 aa11.49□□□□□ -0.57
PFDN6-201ENST00000374606 SFTA2Q6UW10 78 aa11.48□□□□□ -0.57
PFDN6-201ENST00000374606 A0A087WTM6 91 aa11.47□□□□□ -0.57
PFDN6-201ENST00000374606 ZNF815PA8K554 130 aa11.47□□□□□ -0.57
PFDN6-201ENST00000374606 NDUFA1O15239 70 aa11.47□□□□□ -0.57
PFDN6-201ENST00000374606 C2orf82Q6UX34 121 aa11.47□□□□□ -0.57
PFDN6-201ENST00000374606 PCP2Q8IVA1 136 aa11.47□□□□□ -0.57
PFDN6-201ENST00000374606 LINC00518Q8N0U6 118 aa11.47□□□□□ -0.57
PFDN6-201ENST00000374606 NTN5Q8WTR8 489 aaPredicted RBP11.47□□□□□ -0.57
PFDN6-201ENST00000374606 C2orf48Q96LS8 159 aa11.47□□□□□ -0.57
PFDN6-201ENST00000374606 CAMK2N2Q96S95 79 aa11.47□□□□□ -0.57
PFDN6-201ENST00000374606 TTTY13Q9BZ97 58 aa11.47□□□□□ -0.57
PFDN6-201ENST00000374606 MYMXA0A1B0GTQ4 84 aa11.46□□□□□ -0.57
PFDN6-201ENST00000374606 Q8N1X5 172 aa11.46□□□□□ -0.57
PFDN6-201ENST00000374606 APOBP04114 4563 aaKnown RBP11.45□□□□□ -0.58
PFDN6-201ENST00000374606 F8WDY8 70 aa11.45□□□□□ -0.58
PFDN6-201ENST00000374606 COX8AP10176 69 aa11.45□□□□□ -0.58
PFDN6-201ENST00000374606 ZNF625Q96I27 306 aaPredicted RBP11.45□□□□□ -0.58
PFDN6-201ENST00000374606 DNAH5Q8TE73 4624 aa11.45□□□□□ -0.58
PFDN6-201ENST00000374606 EREGO14944 169 aa11.44□□□□□ -0.58
PFDN6-201ENST00000374606 TNP2Q05952 138 aa11.44□□□□□ -0.58
PFDN6-201ENST00000374606 Q8N814 137 aa11.44□□□□□ -0.58
PFDN6-201ENST00000374606 C14orf144Q96I85 54 aa11.44□□□□□ -0.58
PFDN6-201ENST00000374606 HERV-K104P63124 156 aa11.43□□□□□ -0.58
PFDN6-201ENST00000374606 SYCNQ0VAF6 134 aa11.43□□□□□ -0.58
PFDN6-201ENST00000374606 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.42□□□□□ -0.58
PFDN6-201ENST00000374606 SLC25A34Q6PIV7 304 aa11.42□□□□□ -0.58
PFDN6-201ENST00000374606 UNQ6190/PRO20217Q6UXQ8 127 aa11.42□□□□□ -0.58
PFDN6-201ENST00000374606 BOD1L2Q8IYS8 172 aa11.42□□□□□ -0.58
PFDN6-201ENST00000374606 CARD19Q96LW7 228 aa11.42□□□□□ -0.58
PFDN6-201ENST00000374606 DLEU1O43261 78 aa11.41□□□□□ -0.58
PFDN6-201ENST00000374606 C10orf25Q5T742 122 aa11.41□□□□□ -0.58
PFDN6-201ENST00000374606 SCGB1D4Q6XE38 83 aa11.41□□□□□ -0.58
PFDN6-201ENST00000374606 Q6ZRU5 148 aa11.41□□□□□ -0.58
PFDN6-201ENST00000374606 TP73-AS1Q9UF72 201 aa11.41□□□□□ -0.58
PFDN6-201ENST00000374606 TRBV30A0A0K0K1B3 111 aa11.4□□□□□ -0.58
PFDN6-201ENST00000374606 CNBPP62633 177 aaKnown RBP11.4□□□□□ -0.58
PFDN6-201ENST00000374606 MEIG1Q5JSS6 88 aa11.4□□□□□ -0.58
PFDN6-201ENST00000374606 PRO1933Q9H354 126 aa11.4□□□□□ -0.58
PFDN6-201ENST00000374606 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.39□□□□□ -0.59
PFDN6-201ENST00000374606 A0A0J9YXY3 114 aa11.39□□□□□ -0.59
PFDN6-201ENST00000374606 C6orf48Q9UBA6 75 aa11.39□□□□□ -0.59
PFDN6-201ENST00000374606 SLPIP03973 132 aa11.38□□□□□ -0.59
PFDN6-201ENST00000374606 UQCR10Q9UDW1 63 aa11.38□□□□□ -0.59
PFDN6-201ENST00000374606 ERG28Q9UKR5 140 aa11.38□□□□□ -0.59
PFDN6-201ENST00000374606 DMBT1Q9UGM3 2413 aaPredicted RBP11.38□□□□□ -0.59
PFDN6-201ENST00000374606 TSTD3H0UI37 97 aa11.37□□□□□ -0.59
PFDN6-201ENST00000374606 LINC00587B1AMM8 73 aa11.36□□□□□ -0.59
PFDN6-201ENST00000374606 RNF151Q2KHN1 245 aa11.36□□□□□ -0.59
PFDN6-201ENST00000374606 PFN2P35080 140 aa11.35□□□□□ -0.59
PFDN6-201ENST00000374606 CIRBPQ14011 172 aaKnown RBP11.35□□□□□ -0.59
PFDN6-201ENST00000374606 C9orf116Q5BN46 136 aaPredicted RBP11.35□□□□□ -0.59
PFDN6-201ENST00000374606 TMEM238C9JI98 176 aa11.34□□□□□ -0.59
PFDN6-201ENST00000374606 SMIM13P0DJ93 91 aa11.34□□□□□ -0.59
PFDN6-201ENST00000374606 LINC00158P58513 81 aa11.34□□□□□ -0.59
PFDN6-201ENST00000374606 A0A0U1RRA0 63 aa11.33□□□□□ -0.6
PFDN6-201ENST00000374606 TIMM17BO60830 172 aa11.33□□□□□ -0.6
PFDN6-201ENST00000374606 COX17Q14061 63 aa11.33□□□□□ -0.6
PFDN6-201ENST00000374606 MIEN1Q9BRT3 115 aa11.33□□□□□ -0.6
PFDN6-201ENST00000374606 IGLV5-52A0A0A0MRZ9 124 aa11.32□□□□□ -0.6
PFDN6-201ENST00000374606 C2orf91Q6ZV80 131 aa11.32□□□□□ -0.6
PFDN6-201ENST00000374606 HNRNPA3P51991 378 aaKnown RBP11.31□□□□□ -0.6
PFDN6-201ENST00000374606 C9orf163Q8N9P6 203 aa11.31□□□□□ -0.6
PFDN6-201ENST00000374606 HIGD1BQ9P298 99 aa11.31□□□□□ -0.6
PFDN6-201ENST00000374606 PKIGQ9Y2B9 76 aa11.31□□□□□ -0.6
PFDN6-201ENST00000374606 NDUFC2-KCTD14E9PQ53 114 aa11.3□□□□□ -0.6
PFDN6-201ENST00000374606 RPL18AQ02543 176 aaKnown RBP11.3□□□□□ -0.6
PFDN6-201ENST00000374606 LITAFQ99732 161 aa11.3□□□□□ -0.6
PFDN6-201ENST00000374606 LOC107984640A0A0U1RRK4 108 aa11.29□□□□□ -0.6
PFDN6-201ENST00000374606 TLX1NBP0CAT3 122 aa11.29□□□□□ -0.6
PFDN6-201ENST00000374606 MIR7-3HGQ8N6C7 128 aa11.29□□□□□ -0.6
PFDN6-201ENST00000374606 SPANXB1Q9NS25 103 aaPredicted RBP11.29□□□□□ -0.6
PFDN6-201ENST00000374606 EPM2AB3EWF7 344 aa11.28□□□□□ -0.6
PFDN6-201ENST00000374606 FUSP35637 526 aaKnown RBP eCLIP11.28□□□□□ -0.63e-7■□□□□ 8.8
PFDN6-201ENST00000374606 ADAMTSL4-AS1Q5T5F5 129 aa11.28□□□□□ -0.6
PFDN6-201ENST00000374606 DAND5Q8N907 189 aa11.28□□□□□ -0.6
PFDN6-201ENST00000374606 KRTAP10-2P60368 255 aa11.27□□□□□ -0.61
PFDN6-201ENST00000374606 SRSF9Q13242 221 aaKnown RBP eCLIP11.27□□□□□ -0.61
PFDN6-201ENST00000374606 SPANXDQ9BXN6 97 aa11.27□□□□□ -0.61
PFDN6-201ENST00000374606 SPANXCQ9NY87 97 aa11.27□□□□□ -0.61
PFDN6-201ENST00000374606 LINC01620Q4KN68 170 aa11.26□□□□□ -0.61
PFDN6-201ENST00000374606 Q6ZRP5 223 aa11.26□□□□□ -0.61
PFDN6-201ENST00000374606 PGPEP1Q9NXJ5 209 aa11.26□□□□□ -0.61
PFDN6-201ENST00000374606 INAFM2P0DMQ5 153 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms