RNA–Protein interactions for RNA: ENST00000371121.4

SMARCA1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-201ENST00000371121 C11orf68Q9H3H3 251 aaKnown RBP8.03□□□□□ -1.12
SMARCA1-201ENST00000371121 LINC00474Q9P2X8 69 aa8.03□□□□□ -1.12
SMARCA1-201ENST00000371121 SPG11Q96JI7 2443 aa8.03□□□□□ -1.12
SMARCA1-201ENST00000371121 TRBV10-3A0A0K0K1G6 114 aa8.02□□□□□ -1.12
SMARCA1-201ENST00000371121 DEFB114Q30KQ6 69 aa8.02□□□□□ -1.13
SMARCA1-201ENST00000371121 ATP5EP2Q5VTU8 51 aa8.02□□□□□ -1.13
SMARCA1-201ENST00000371121 SNURFQ9Y675 71 aa8.01□□□□□ -1.13
SMARCA1-201ENST00000371121 LINC01547P58512 204 aaPredicted RBP8.01□□□□□ -1.13
SMARCA1-201ENST00000371121 MRAPQ8TCY5 172 aa8.01□□□□□ -1.13
SMARCA1-201ENST00000371121 FAM229BQ4G0N7 80 aa8.01□□□□□ -1.13
SMARCA1-201ENST00000371121 NOP10Q9NPE3 64 aaKnown RBP8□□□□□ -1.13
SMARCA1-201ENST00000371121 SERP1Q9Y6X1 66 aa8□□□□□ -1.13
SMARCA1-201ENST00000371121 B4DSR2 109 aa8□□□□□ -1.13
SMARCA1-201ENST00000371121 PRO0628Q9UI54 55 aa8□□□□□ -1.13
SMARCA1-201ENST00000371121 EPG5Q9HCE0 2579 aa7.99□□□□□ -1.13
SMARCA1-201ENST00000371121 LINC00959A0A1B0GUT2 108 aa7.99□□□□□ -1.13
SMARCA1-201ENST00000371121 JMJD7-PLA2G4BH0Y9G9 81 aa7.99□□□□□ -1.13
SMARCA1-201ENST00000371121 CHD8Q9HCK8 2581 aa7.99□□□□□ -1.13
SMARCA1-201ENST00000371121 TRBV7-4A0A0J9YYF1 115 aa7.99□□□□□ -1.13
SMARCA1-201ENST00000371121 KIAA0087Q14695 138 aa7.99□□□□□ -1.13
SMARCA1-201ENST00000371121 TM2D3Q9BRN9 247 aa7.99□□□□□ -1.13
SMARCA1-201ENST00000371121 USP9XQ93008 2570 aaPredicted RBP7.98□□□□□ -1.13
SMARCA1-201ENST00000371121 CSMD3Q7Z407 3707 aa7.98□□□□□ -1.13
SMARCA1-201ENST00000371121 TRAV7A0A075B6U4 112 aa7.98□□□□□ -1.13
SMARCA1-201ENST00000371121 TMEM256-PLSCR3K7ERE1 68 aa7.98□□□□□ -1.13
SMARCA1-201ENST00000371121 ZNF843Q8N446 348 aa7.98□□□□□ -1.13
SMARCA1-201ENST00000371121 UCNP55089 124 aa7.98□□□□□ -1.13
SMARCA1-201ENST00000371121 C9orf116Q5BN46 136 aaPredicted RBP7.98□□□□□ -1.13
SMARCA1-201ENST00000371121 TRBV6-8A0A0A6YYG3 113 aa7.97□□□□□ -1.13
SMARCA1-201ENST00000371121 J3QLI3 93 aa7.97□□□□□ -1.13
SMARCA1-201ENST00000371121 UBE2L6O14933 153 aa7.97□□□□□ -1.13
SMARCA1-201ENST00000371121 POLQO75417 2590 aa7.97□□□□□ -1.13
SMARCA1-201ENST00000371121 USP9YO00507 2555 aaPredicted RBP7.97□□□□□ -1.13
SMARCA1-201ENST00000371121 LOC110117498A0A087WWA1 95 aa7.97□□□□□ -1.13
SMARCA1-201ENST00000371121 Q6ZVQ6 151 aa7.97□□□□□ -1.13
SMARCA1-201ENST00000371121 PTPN13Q12923 2485 aa7.97□□□□□ -1.13
SMARCA1-201ENST00000371121 GCN1Q92616 2671 aaKnown RBP7.96□□□□□ -1.13
SMARCA1-201ENST00000371121 TMEM86BQ8N661 226 aa7.96□□□□□ -1.13
SMARCA1-201ENST00000371121 OTOGQ6ZRI0 2925 aa7.96□□□□□ -1.13
SMARCA1-201ENST00000371121 F8WEM9 126 aa7.96□□□□□ -1.14
SMARCA1-201ENST00000371121 MAPK1IP1LQ8NDC0 245 aa7.96□□□□□ -1.14
SMARCA1-201ENST00000371121 TLN2Q9Y4G6 2542 aa7.96□□□□□ -1.14
SMARCA1-201ENST00000371121 VWFP04275 2813 aa7.96□□□□□ -1.14
SMARCA1-201ENST00000371121 NCOR2Q9Y618 2525 aa7.96□□□□□ -1.14
SMARCA1-201ENST00000371121 C6orf99Q4VX62 202 aa7.96□□□□□ -1.14
SMARCA1-201ENST00000371121 LINC00575Q6W349 94 aa7.96□□□□□ -1.14
SMARCA1-201ENST00000371121 WFDC10AQ9H1F0 79 aa7.96□□□□□ -1.14
SMARCA1-201ENST00000371121 MYO9AB2RTY4 2548 aa7.95□□□□□ -1.14
SMARCA1-201ENST00000371121 C6orf223Q8N319 242 aa7.95□□□□□ -1.14
SMARCA1-201ENST00000371121 Q8N3U1 123 aa7.95□□□□□ -1.14
SMARCA1-201ENST00000371121 CSNK1G2-AS1Q8NCQ2 148 aa7.95□□□□□ -1.14
SMARCA1-201ENST00000371121 ANKRD17O75179 2603 aaKnown RBP7.94□□□□□ -1.14
SMARCA1-201ENST00000371121 RPL35AP18077 110 aaKnown RBP7.94□□□□□ -1.14
SMARCA1-201ENST00000371121 FSHBP01225 129 aa7.94□□□□□ -1.14
SMARCA1-201ENST00000371121 S100A7L2Q5SY68 101 aa7.94□□□□□ -1.14
SMARCA1-201ENST00000371121 CCL19Q99731 98 aa7.94□□□□□ -1.14
SMARCA1-201ENST00000371121 Q6YL49 198 aa7.94□□□□□ -1.14
SMARCA1-201ENST00000371121 Q8IZM0 81 aa7.94□□□□□ -1.14
SMARCA1-201ENST00000371121 UBL5Q9BZL1 73 aa7.93□□□□□ -1.14
SMARCA1-201ENST00000371121 WNK1Q9H4A3 2382 aa7.93□□□□□ -1.14
SMARCA1-201ENST00000371121 WFDC11Q8NEX6 87 aa7.93□□□□□ -1.14
SMARCA1-201ENST00000371121 ANK2Q01484 3957 aa7.93□□□□□ -1.14
SMARCA1-201ENST00000371121 BCE1O60756 84 aa7.92□□□□□ -1.14
SMARCA1-201ENST00000371121 RNASE1P07998 156 aaKnown RBP7.92□□□□□ -1.14
SMARCA1-201ENST00000371121 TRBV7-6A0A0J9YX20 115 aa7.92□□□□□ -1.14
SMARCA1-201ENST00000371121 C6orf226Q5I0X4 101 aa7.92□□□□□ -1.14
SMARCA1-201ENST00000371121 CLPSL2Q6UWE3 100 aa7.92□□□□□ -1.14
SMARCA1-201ENST00000371121 C4orf3Q8WVX3 66 aa7.92□□□□□ -1.14
SMARCA1-201ENST00000371121 C9orf66Q5T8R8 295 aa7.91□□□□□ -1.14
SMARCA1-201ENST00000371121 STHQ8IWL8 128 aa7.9□□□□□ -1.14
SMARCA1-201ENST00000371121 C19orf73Q9NVV2 129 aa7.9□□□□□ -1.14
SMARCA1-201ENST00000371121 RBM3P98179 157 aaKnown RBP7.9□□□□□ -1.14
SMARCA1-201ENST00000371121 C10orf25Q5T742 122 aa7.9□□□□□ -1.14
SMARCA1-201ENST00000371121 SCXQ7RTU7 201 aa7.9□□□□□ -1.15
SMARCA1-201ENST00000371121 IGHV4-28A0A0C4DH34 117 aa7.89□□□□□ -1.15
SMARCA1-201ENST00000371121 A0A1W2PRX2 142 aa7.89□□□□□ -1.15
SMARCA1-201ENST00000371121 ZNF561-AS1K7EIQ3 104 aa7.89□□□□□ -1.15
SMARCA1-201ENST00000371121 PKIGQ9Y2B9 76 aa7.89□□□□□ -1.15
SMARCA1-201ENST00000371121 CXCL6P80162 114 aa7.89□□□□□ -1.15
SMARCA1-201ENST00000371121 SPTBN4Q9H254 2564 aa7.88□□□□□ -1.15
SMARCA1-201ENST00000371121 IGSF10Q6WRI0 2623 aa7.88□□□□□ -1.15
SMARCA1-201ENST00000371121 SMIM26A0A096LP01 95 aa7.88□□□□□ -1.15
SMARCA1-201ENST00000371121 GNLYP22749 145 aa7.88□□□□□ -1.15
SMARCA1-201ENST00000371121 HAMPP81172 84 aa7.88□□□□□ -1.15
SMARCA1-201ENST00000371121 LINC00269Q8N2A0 174 aa7.87□□□□□ -1.15
SMARCA1-201ENST00000371121 TRGV2A0A075B6R0 118 aa7.87□□□□□ -1.15
SMARCA1-201ENST00000371121 IGLV6-57P01721 117 aa7.87□□□□□ -1.15
SMARCA1-201ENST00000371121 KHDC1LQ5JSQ8 128 aa7.87□□□□□ -1.15
SMARCA1-201ENST00000371121 DYNLRB2Q8TF09 96 aa7.87□□□□□ -1.15
SMARCA1-201ENST00000371121 MUC7Q8TAX7 377 aa7.87□□□□□ -1.15
SMARCA1-201ENST00000371121 LRRK2Q5S007 2527 aa7.87□□□□□ -1.15
SMARCA1-201ENST00000371121 IGHV4-31P0DP07 118 aa7.86□□□□□ -1.15
SMARCA1-201ENST00000371121 Q8N9L7 120 aa7.86□□□□□ -1.15
SMARCA1-201ENST00000371121 Q6ZQY7 126 aa7.85□□□□□ -1.15
SMARCA1-201ENST00000371121 C1orf43Q9BWL3 253 aa7.85□□□□□ -1.15
SMARCA1-201ENST00000371121 A0A1B0GUV1 79 aa7.85□□□□□ -1.15
SMARCA1-201ENST00000371121 Q6ZTC4 211 aa7.85□□□□□ -1.15
SMARCA1-201ENST00000371121 C16orf74Q96GX8 76 aa7.85□□□□□ -1.15
SMARCA1-201ENST00000371121 DOPEY1Q5JWR5 2465 aa7.85□□□□□ -1.15
SMARCA1-201ENST00000371121 COX17Q14061 63 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms