RNA–Protein interactions for RNA: ENST00000371121.4

SMARCA1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,564 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-201ENST00000371121 C11orf68Q9H3H3 251 aaKnown RBP8.03□□□□□ -1.12
SMARCA1-201ENST00000371121 LINC00474Q9P2X8 69 aa8.03□□□□□ -1.12
SMARCA1-201ENST00000371121 SPG11Q96JI7 2443 aa8.03□□□□□ -1.12
SMARCA1-201ENST00000371121 TRBV10-3A0A0K0K1G6 114 aa8.02□□□□□ -1.12
SMARCA1-201ENST00000371121 DEFB114Q30KQ6 69 aa8.02□□□□□ -1.13
SMARCA1-201ENST00000371121 ATP5EP2Q5VTU8 51 aa8.02□□□□□ -1.13
SMARCA1-201ENST00000371121 SNURFQ9Y675 71 aa8.01□□□□□ -1.13
SMARCA1-201ENST00000371121 LINC01547P58512 204 aaPredicted RBP8.01□□□□□ -1.13
SMARCA1-201ENST00000371121 MRAPQ8TCY5 172 aa8.01□□□□□ -1.13
SMARCA1-201ENST00000371121 FAM229BQ4G0N7 80 aa8.01□□□□□ -1.13
SMARCA1-201ENST00000371121 NOP10Q9NPE3 64 aaKnown RBP8□□□□□ -1.13
SMARCA1-201ENST00000371121 SERP1Q9Y6X1 66 aa8□□□□□ -1.13
SMARCA1-201ENST00000371121 B4DSR2 109 aa8□□□□□ -1.13
SMARCA1-201ENST00000371121 PRO0628Q9UI54 55 aa8□□□□□ -1.13
SMARCA1-201ENST00000371121 EPG5Q9HCE0 2579 aa7.99□□□□□ -1.13
SMARCA1-201ENST00000371121 LINC00959A0A1B0GUT2 108 aa7.99□□□□□ -1.13
SMARCA1-201ENST00000371121 JMJD7-PLA2G4BH0Y9G9 81 aa7.99□□□□□ -1.13
SMARCA1-201ENST00000371121 CHD8Q9HCK8 2581 aa7.99□□□□□ -1.13
SMARCA1-201ENST00000371121 TRBV7-4A0A0J9YYF1 115 aa7.99□□□□□ -1.13
SMARCA1-201ENST00000371121 KIAA0087Q14695 138 aa7.99□□□□□ -1.13
SMARCA1-201ENST00000371121 TM2D3Q9BRN9 247 aa7.99□□□□□ -1.13
SMARCA1-201ENST00000371121 USP9XQ93008 2570 aaPredicted RBP7.98□□□□□ -1.13
SMARCA1-201ENST00000371121 CSMD3Q7Z407 3707 aa7.98□□□□□ -1.13
SMARCA1-201ENST00000371121 TRAV7A0A075B6U4 112 aa7.98□□□□□ -1.13
SMARCA1-201ENST00000371121 TMEM256-PLSCR3K7ERE1 68 aa7.98□□□□□ -1.13
SMARCA1-201ENST00000371121 ZNF843Q8N446 348 aa7.98□□□□□ -1.13
SMARCA1-201ENST00000371121 UCNP55089 124 aa7.98□□□□□ -1.13
SMARCA1-201ENST00000371121 C9orf116Q5BN46 136 aaPredicted RBP7.98□□□□□ -1.13
SMARCA1-201ENST00000371121 TRBV6-8A0A0A6YYG3 113 aa7.97□□□□□ -1.13
SMARCA1-201ENST00000371121 J3QLI3 93 aa7.97□□□□□ -1.13
SMARCA1-201ENST00000371121 UBE2L6O14933 153 aa7.97□□□□□ -1.13
SMARCA1-201ENST00000371121 POLQO75417 2590 aa7.97□□□□□ -1.13
SMARCA1-201ENST00000371121 USP9YO00507 2555 aaPredicted RBP7.97□□□□□ -1.13
SMARCA1-201ENST00000371121 LOC110117498A0A087WWA1 95 aa7.97□□□□□ -1.13
SMARCA1-201ENST00000371121 Q6ZVQ6 151 aa7.97□□□□□ -1.13
SMARCA1-201ENST00000371121 PTPN13Q12923 2485 aa7.97□□□□□ -1.13
SMARCA1-201ENST00000371121 GCN1Q92616 2671 aaKnown RBP7.96□□□□□ -1.13
SMARCA1-201ENST00000371121 TMEM86BQ8N661 226 aa7.96□□□□□ -1.13
SMARCA1-201ENST00000371121 OTOGQ6ZRI0 2925 aa7.96□□□□□ -1.13
SMARCA1-201ENST00000371121 F8WEM9 126 aa7.96□□□□□ -1.14
SMARCA1-201ENST00000371121 MAPK1IP1LQ8NDC0 245 aa7.96□□□□□ -1.14
SMARCA1-201ENST00000371121 TLN2Q9Y4G6 2542 aa7.96□□□□□ -1.14
SMARCA1-201ENST00000371121 VWFP04275 2813 aa7.96□□□□□ -1.14
SMARCA1-201ENST00000371121 NCOR2Q9Y618 2525 aa7.96□□□□□ -1.14
SMARCA1-201ENST00000371121 C6orf99Q4VX62 202 aa7.96□□□□□ -1.14
SMARCA1-201ENST00000371121 LINC00575Q6W349 94 aa7.96□□□□□ -1.14
SMARCA1-201ENST00000371121 WFDC10AQ9H1F0 79 aa7.96□□□□□ -1.14
SMARCA1-201ENST00000371121 MYO9AB2RTY4 2548 aa7.95□□□□□ -1.14
SMARCA1-201ENST00000371121 C6orf223Q8N319 242 aa7.95□□□□□ -1.14
SMARCA1-201ENST00000371121 Q8N3U1 123 aa7.95□□□□□ -1.14
SMARCA1-201ENST00000371121 CSNK1G2-AS1Q8NCQ2 148 aa7.95□□□□□ -1.14
SMARCA1-201ENST00000371121 ANKRD17O75179 2603 aaKnown RBP7.94□□□□□ -1.14
SMARCA1-201ENST00000371121 RPL35AP18077 110 aaKnown RBP7.94□□□□□ -1.14
SMARCA1-201ENST00000371121 FSHBP01225 129 aa7.94□□□□□ -1.14
SMARCA1-201ENST00000371121 S100A7L2Q5SY68 101 aa7.94□□□□□ -1.14
SMARCA1-201ENST00000371121 CCL19Q99731 98 aa7.94□□□□□ -1.14
SMARCA1-201ENST00000371121 Q6YL49 198 aa7.94□□□□□ -1.14
SMARCA1-201ENST00000371121 Q8IZM0 81 aa7.94□□□□□ -1.14
SMARCA1-201ENST00000371121 UBL5Q9BZL1 73 aa7.93□□□□□ -1.14
SMARCA1-201ENST00000371121 WNK1Q9H4A3 2382 aa7.93□□□□□ -1.14
SMARCA1-201ENST00000371121 WFDC11Q8NEX6 87 aa7.93□□□□□ -1.14
SMARCA1-201ENST00000371121 ANK2Q01484 3957 aa7.93□□□□□ -1.14
SMARCA1-201ENST00000371121 BCE1O60756 84 aa7.92□□□□□ -1.14
SMARCA1-201ENST00000371121 RNASE1P07998 156 aaKnown RBP7.92□□□□□ -1.14
SMARCA1-201ENST00000371121 TRBV7-6A0A0J9YX20 115 aa7.92□□□□□ -1.14
SMARCA1-201ENST00000371121 C6orf226Q5I0X4 101 aa7.92□□□□□ -1.14
SMARCA1-201ENST00000371121 CLPSL2Q6UWE3 100 aa7.92□□□□□ -1.14
SMARCA1-201ENST00000371121 C4orf3Q8WVX3 66 aa7.92□□□□□ -1.14
SMARCA1-201ENST00000371121 C9orf66Q5T8R8 295 aa7.91□□□□□ -1.14
SMARCA1-201ENST00000371121 STHQ8IWL8 128 aa7.9□□□□□ -1.14
SMARCA1-201ENST00000371121 C19orf73Q9NVV2 129 aa7.9□□□□□ -1.14
SMARCA1-201ENST00000371121 RBM3P98179 157 aaKnown RBP7.9□□□□□ -1.14
SMARCA1-201ENST00000371121 C10orf25Q5T742 122 aa7.9□□□□□ -1.14
SMARCA1-201ENST00000371121 SCXQ7RTU7 201 aa7.9□□□□□ -1.15
SMARCA1-201ENST00000371121 IGHV4-28A0A0C4DH34 117 aa7.89□□□□□ -1.15
SMARCA1-201ENST00000371121 A0A1W2PRX2 142 aa7.89□□□□□ -1.15
SMARCA1-201ENST00000371121 ZNF561-AS1K7EIQ3 104 aa7.89□□□□□ -1.15
SMARCA1-201ENST00000371121 PKIGQ9Y2B9 76 aa7.89□□□□□ -1.15
SMARCA1-201ENST00000371121 CXCL6P80162 114 aa7.89□□□□□ -1.15
SMARCA1-201ENST00000371121 SPTBN4Q9H254 2564 aa7.88□□□□□ -1.15
SMARCA1-201ENST00000371121 IGSF10Q6WRI0 2623 aa7.88□□□□□ -1.15
SMARCA1-201ENST00000371121 SMIM26A0A096LP01 95 aa7.88□□□□□ -1.15
SMARCA1-201ENST00000371121 GNLYP22749 145 aa7.88□□□□□ -1.15
SMARCA1-201ENST00000371121 HAMPP81172 84 aa7.88□□□□□ -1.15
SMARCA1-201ENST00000371121 LINC00269Q8N2A0 174 aa7.87□□□□□ -1.15
SMARCA1-201ENST00000371121 TRGV2A0A075B6R0 118 aa7.87□□□□□ -1.15
SMARCA1-201ENST00000371121 IGLV6-57P01721 117 aa7.87□□□□□ -1.15
SMARCA1-201ENST00000371121 KHDC1LQ5JSQ8 128 aa7.87□□□□□ -1.15
SMARCA1-201ENST00000371121 DYNLRB2Q8TF09 96 aa7.87□□□□□ -1.15
SMARCA1-201ENST00000371121 MUC7Q8TAX7 377 aa7.87□□□□□ -1.15
SMARCA1-201ENST00000371121 LRRK2Q5S007 2527 aa7.87□□□□□ -1.15
SMARCA1-201ENST00000371121 IGHV4-31P0DP07 118 aa7.86□□□□□ -1.15
SMARCA1-201ENST00000371121 Q8N9L7 120 aa7.86□□□□□ -1.15
SMARCA1-201ENST00000371121 Q6ZQY7 126 aa7.85□□□□□ -1.15
SMARCA1-201ENST00000371121 C1orf43Q9BWL3 253 aa7.85□□□□□ -1.15
SMARCA1-201ENST00000371121 A0A1B0GUV1 79 aa7.85□□□□□ -1.15
SMARCA1-201ENST00000371121 Q6ZTC4 211 aa7.85□□□□□ -1.15
SMARCA1-201ENST00000371121 C16orf74Q96GX8 76 aa7.85□□□□□ -1.15
SMARCA1-201ENST00000371121 DOPEY1Q5JWR5 2465 aa7.85□□□□□ -1.15
SMARCA1-201ENST00000371121 COX17Q14061 63 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms