RNA–Protein interactions for RNA: ENST00000363016.1

RNU6-249P-201, Transcript of RNA, U6 small nuclear 249, pseudogene, humanhuman

BASIC

Gene RNU6-249P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-249P-201ENST00000363016 IGKV3-15P01624 115 aa3.17□□□□□ -1.9
RNU6-249P-201ENST00000363016 FXYD4P59646 89 aa3.17□□□□□ -1.9
RNU6-249P-201ENST00000363016 ARHGAP5-AS1Q96IT6 56 aa3.17□□□□□ -1.9
RNU6-249P-201ENST00000363016 SMIM2Q9BVW6 85 aa3.17□□□□□ -1.9
RNU6-249P-201ENST00000363016 A0A087WTM6 91 aa3.16□□□□□ -1.9
RNU6-249P-201ENST00000363016 TRGV1A0A0A0MS02 117 aa3.16□□□□□ -1.9
RNU6-249P-201ENST00000363016 A0A1B0GU69 56 aa3.16□□□□□ -1.9
RNU6-249P-201ENST00000363016 MRPL33O75394 65 aaKnown RBP3.16□□□□□ -1.9
RNU6-249P-201ENST00000363016 COX7BP24311 80 aa3.16□□□□□ -1.9
RNU6-249P-201ENST00000363016 R4GN34 69 aa3.16□□□□□ -1.9
RNU6-249P-201ENST00000363016 CUL9Q8IWT3 2517 aa3.16□□□□□ -1.9
RNU6-249P-201ENST00000363016 COL27A1Q8IZC6 1860 aaPredicted RBP3.16□□□□□ -1.9
RNU6-249P-201ENST00000363016 CEP192Q8TEP8 1941 aa3.15□□□□□ -1.9
RNU6-249P-201ENST00000363016 A0A087WYN8 130 aa3.15□□□□□ -1.91
RNU6-249P-201ENST00000363016 A0A1W2PNN7 141 aa3.15□□□□□ -1.91
RNU6-249P-201ENST00000363016 TNRC6CQ9HCJ0 1690 aaKnown RBP3.14□□□□□ -1.91
RNU6-249P-201ENST00000363016 ZFHX3Q15911 3703 aa3.14□□□□□ -1.91
RNU6-249P-201ENST00000363016 NBDYA0A0U1RRE5 68 aa3.14□□□□□ -1.91
RNU6-249P-201ENST00000363016 LINC00959A0A1B0GUT2 108 aa3.14□□□□□ -1.91
RNU6-249P-201ENST00000363016 IGKV4-1P06312 121 aa3.14□□□□□ -1.91
RNU6-249P-201ENST00000363016 COL4A5P29400 1685 aa3.14□□□□□ -1.91
RNU6-249P-201ENST00000363016 PRRC2BQ5JSZ5 2229 aaKnown RBP3.13□□□□□ -1.91
RNU6-249P-201ENST00000363016 SPAG17Q6Q759 2223 aa3.13□□□□□ -1.91
RNU6-249P-201ENST00000363016 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.13□□□□□ -1.91
RNU6-249P-201ENST00000363016 IGKV2-29A2NJV5 120 aaPredicted RBP3.13□□□□□ -1.91
RNU6-249P-201ENST00000363016 C5orf56Q8N8D9 126 aa3.13□□□□□ -1.91
RNU6-249P-201ENST00000363016 CNFNQ9BYD5 112 aa3.13□□□□□ -1.91
RNU6-249P-201ENST00000363016 TTTY10Q9BZA0 68 aa3.13□□□□□ -1.91
RNU6-249P-201ENST00000363016 ACYP2P14621 99 aa3.12□□□□□ -1.91
RNU6-249P-201ENST00000363016 CCL26Q9Y258 94 aa3.12□□□□□ -1.91
RNU6-249P-201ENST00000363016 LINC00472Q9H8W2 130 aa3.11□□□□□ -1.91
RNU6-249P-201ENST00000363016 DOCK10Q96BY6 2186 aa3.11□□□□□ -1.91
RNU6-249P-201ENST00000363016 PRRC2AP48634 2157 aaKnown RBP3.1□□□□□ -1.91
RNU6-249P-201ENST00000363016 IGLV4-60A0A075B6I1 120 aa3.1□□□□□ -1.91
RNU6-249P-201ENST00000363016 LINC00308Q8TCZ7 52 aa3.1□□□□□ -1.91
RNU6-249P-201ENST00000363016 CACNA1DQ01668 2161 aa3.1□□□□□ -1.91
RNU6-249P-201ENST00000363016 SSC5DA1L4H1 1573 aa3.09□□□□□ -1.91
RNU6-249P-201ENST00000363016 A0A0G2JQZ4 141 aa3.09□□□□□ -1.91
RNU6-249P-201ENST00000363016 NDUFA1O15239 70 aa3.09□□□□□ -1.91
RNU6-249P-201ENST00000363016 C10orf55Q5SWW7 151 aa3.09□□□□□ -1.91
RNU6-249P-201ENST00000363016 SPINK14Q6IE38 97 aa3.09□□□□□ -1.91
RNU6-249P-201ENST00000363016 Q96NJ1 140 aa3.09□□□□□ -1.91
RNU6-249P-201ENST00000363016 IGKV2-30P06310 120 aa3.08□□□□□ -1.92
RNU6-249P-201ENST00000363016 LORP23490 312 aaPredicted RBP3.08□□□□□ -1.92
RNU6-249P-201ENST00000363016 DEFB134Q4QY38 66 aa3.08□□□□□ -1.92
RNU6-249P-201ENST00000363016 LINC01590Q5TEZ4 76 aa3.08□□□□□ -1.92
RNU6-249P-201ENST00000363016 Q6ZQY7 126 aa3.08□□□□□ -1.92
RNU6-249P-201ENST00000363016 KMT2BQ9UMN6 2715 aaPredicted RBP3.08□□□□□ -1.92
RNU6-249P-201ENST00000363016 PRB2P02812 416 aaPredicted RBP3.07□□□□□ -1.92
RNU6-249P-201ENST00000363016 SLPIP03973 132 aa3.07□□□□□ -1.92
RNU6-249P-201ENST00000363016 LINC00612Q8N6U2 182 aa3.07□□□□□ -1.92
RNU6-249P-201ENST00000363016 DEFB131BA0A096LNP1 70 aa3.06□□□□□ -1.92
RNU6-249P-201ENST00000363016 LCE2BO14633 110 aa3.06□□□□□ -1.92
RNU6-249P-201ENST00000363016 HRES1P13985 223 aa3.06□□□□□ -1.92
RNU6-249P-201ENST00000363016 ADAMTS9Q9P2N4 1935 aa3.06□□□□□ -1.92
RNU6-249P-201ENST00000363016 GOLGA4Q13439 2230 aaKnown RBP3.05□□□□□ -1.92
RNU6-249P-201ENST00000363016 LOC730098B7Z3J9 87 aa3.05□□□□□ -1.92
RNU6-249P-201ENST00000363016 IGLV6-57P01721 117 aa3.05□□□□□ -1.92
RNU6-249P-201ENST00000363016 LINC00304Q8N9R0 145 aa3.05□□□□□ -1.92
RNU6-249P-201ENST00000363016 FREM1Q5H8C1 2179 aa3.05□□□□□ -1.92
RNU6-249P-201ENST00000363016 LINC00158P58513 81 aa3.04□□□□□ -1.92
RNU6-249P-201ENST00000363016 TNCP24821 2201 aa3.03□□□□□ -1.92
RNU6-249P-201ENST00000363016 ABCA4P78363 2273 aa3.03□□□□□ -1.92
RNU6-249P-201ENST00000363016 SDK1Q7Z5N4 2213 aa3.03□□□□□ -1.93
RNU6-249P-201ENST00000363016 TPRXLQ17RH7 258 aa3.02□□□□□ -1.93
RNU6-249P-201ENST00000363016 SMIM11BQ8TCY0 68 aa3.02□□□□□ -1.93
RNU6-249P-201ENST00000363016 CCL19Q99731 98 aa3.02□□□□□ -1.93
RNU6-249P-201ENST00000363016 RP1P56715 2156 aa3.02□□□□□ -1.93
RNU6-249P-201ENST00000363016 SPTY2D1-AS1A0A0U1RR47 76 aa3.01□□□□□ -1.93
RNU6-249P-201ENST00000363016 H3BRN7 92 aa3.01□□□□□ -1.93
RNU6-249P-201ENST00000363016 INE1O15225 51 aa3.01□□□□□ -1.93
RNU6-249P-201ENST00000363016 PRB1P04280 392 aa3.01□□□□□ -1.93
RNU6-249P-201ENST00000363016 SSBP3-AS1Q7Z2R9 100 aa3.01□□□□□ -1.93
RNU6-249P-201ENST00000363016 SPACA4Q8TDM5 124 aa3.01□□□□□ -1.93
RNU6-249P-201ENST00000363016 ANAPC11Q9NYG5 84 aa3.01□□□□□ -1.93
RNU6-249P-201ENST00000363016 UNC13CQ8NB66 2214 aa3.01□□□□□ -1.93
RNU6-249P-201ENST00000363016 ZFHX2Q9C0A1 2572 aaPredicted RBP3□□□□□ -1.93
RNU6-249P-201ENST00000363016 PRR14LQ5THK1 2151 aa3□□□□□ -1.93
RNU6-249P-201ENST00000363016 IGKV2D-30A0A075B6S6 120 aa2.99□□□□□ -1.93
RNU6-249P-201ENST00000363016 LY6G6CO95867 125 aa2.99□□□□□ -1.93
RNU6-249P-201ENST00000363016 CRIP1P50238 77 aa2.99□□□□□ -1.93
RNU6-249P-201ENST00000363016 Q8IZM0 81 aa2.99□□□□□ -1.93
RNU6-249P-201ENST00000363016 CACNA1IQ9P0X4 2223 aa2.99□□□□□ -1.93
RNU6-249P-201ENST00000363016 H3BSH0 61 aa2.98□□□□□ -1.93
RNU6-249P-201ENST00000363016 M0R2N4 97 aa2.98□□□□□ -1.93
RNU6-249P-201ENST00000363016 LINC00315P59091 139 aa2.98□□□□□ -1.93
RNU6-249P-201ENST00000363016 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.98□□□□□ -1.93
RNU6-249P-201ENST00000363016 Q8N9L7 120 aa2.98□□□□□ -1.93
RNU6-249P-201ENST00000363016 COL4A2P08572 1712 aa2.98□□□□□ -1.93
RNU6-249P-201ENST00000363016 ALPK2Q86TB3 2170 aa2.97□□□□□ -1.93
RNU6-249P-201ENST00000363016 ANGP03950 147 aaKnown RBP2.97□□□□□ -1.93
RNU6-249P-201ENST00000363016 KRTAP11-1Q8IUC1 163 aa2.97□□□□□ -1.93
RNU6-249P-201ENST00000363016 COL4A4P53420 1690 aaPredicted RBP2.96□□□□□ -1.94
RNU6-249P-201ENST00000363016 CDKN2A-AS1Q9UH64 79 aa2.96□□□□□ -1.94
RNU6-249P-201ENST00000363016 C14orf177Q52M58 125 aa2.95□□□□□ -1.94
RNU6-249P-201ENST00000363016 Q6ZRX8 168 aa2.95□□□□□ -1.94
RNU6-249P-201ENST00000363016 IGKV2D-24A0A075B6R9 120 aa2.94□□□□□ -1.94
RNU6-249P-201ENST00000363016 SEC16AO15027 2179 aa2.93□□□□□ -1.94
RNU6-249P-201ENST00000363016 PRB3Q04118 309 aaPredicted RBP2.93□□□□□ -1.94
RNU6-249P-201ENST00000363016 KRTAP24-1Q3LI83 254 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 103.7 ms