RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 ZNF561-AS1K7EIQ3 104 aa13.59□□□□□ -0.23
SHISA4-201ENST00000362011 COX8AP10176 69 aa13.59□□□□□ -0.23
SHISA4-201ENST00000362011 PCP2Q8IVA1 136 aa13.59□□□□□ -0.23
SHISA4-201ENST00000362011 TTTY13Q9BZ97 58 aa13.59□□□□□ -0.23
SHISA4-201ENST00000362011 ZNF815PA8K554 130 aa13.58□□□□□ -0.24
SHISA4-201ENST00000362011 LECT2O14960 151 aa13.58□□□□□ -0.24
SHISA4-201ENST00000362011 CXCL5P42830 114 aa13.58□□□□□ -0.24
SHISA4-201ENST00000362011 C14orf144Q96I85 54 aa13.58□□□□□ -0.24
SHISA4-201ENST00000362011 NDUFA12Q9UI09 145 aa13.58□□□□□ -0.24
SHISA4-201ENST00000362011 PKD1P98161 4303 aa13.57□□□□□ -0.24
SHISA4-201ENST00000362011 NDUFA1O15239 70 aa13.57□□□□□ -0.24
SHISA4-201ENST00000362011 MYMXA0A1B0GTQ4 84 aa13.56□□□□□ -0.24
SHISA4-201ENST00000362011 CKS1BP61024 79 aa13.56□□□□□ -0.24
SHISA4-201ENST00000362011 C14orf177Q52M58 125 aa13.56□□□□□ -0.24
SHISA4-201ENST00000362011 SFTA2Q6UW10 78 aa13.56□□□□□ -0.24
SHISA4-201ENST00000362011 NTN5Q8WTR8 489 aaPredicted RBP13.56□□□□□ -0.24
SHISA4-201ENST00000362011 LINC00526Q96FQ7 95 aa13.56□□□□□ -0.24
SHISA4-201ENST00000362011 LRCOL1A6NCL2 159 aa13.55□□□□□ -0.24
SHISA4-201ENST00000362011 WFDC2Q14508 124 aa13.55□□□□□ -0.24
SHISA4-201ENST00000362011 SLC25A34Q6PIV7 304 aa13.55□□□□□ -0.24
SHISA4-201ENST00000362011 C2orf48Q96LS8 159 aa13.55□□□□□ -0.24
SHISA4-201ENST00000362011 PRO1933Q9H354 126 aa13.55□□□□□ -0.24
SHISA4-201ENST00000362011 ABCA13Q86UQ4 5058 aa13.55□□□□□ -0.24
SHISA4-201ENST00000362011 F8WDY8 70 aa13.54□□□□□ -0.24
SHISA4-201ENST00000362011 BOD1L2Q8IYS8 172 aa13.54□□□□□ -0.24
SHISA4-201ENST00000362011 ZNF625Q96I27 306 aaPredicted RBP13.54□□□□□ -0.24
SHISA4-201ENST00000362011 RTL8CO15255 209 aa13.53□□□□□ -0.24
SHISA4-201ENST00000362011 DLEU1O43261 78 aa13.53□□□□□ -0.24
SHISA4-201ENST00000362011 HERV-K104P63124 156 aa13.53□□□□□ -0.24
SHISA4-201ENST00000362011 C2orf82Q6UX34 121 aa13.53□□□□□ -0.24
SHISA4-201ENST00000362011 CAMK2N2Q96S95 79 aa13.52□□□□□ -0.25
SHISA4-201ENST00000362011 TSTD3H0UI37 97 aa13.51□□□□□ -0.25
SHISA4-201ENST00000362011 UQCR10Q9UDW1 63 aa13.51□□□□□ -0.25
SHISA4-201ENST00000362011 A0A087WTM6 91 aa13.5□□□□□ -0.25
SHISA4-201ENST00000362011 TP73-AS1Q9UF72 201 aa13.5□□□□□ -0.25
SHISA4-201ENST00000362011 UNQ6190/PRO20217Q6UXQ8 127 aa13.49□□□□□ -0.25
SHISA4-201ENST00000362011 SCGB1D4Q6XE38 83 aa13.49□□□□□ -0.25
SHISA4-201ENST00000362011 A0A0J9YXY3 114 aa13.48□□□□□ -0.25
SHISA4-201ENST00000362011 SYCNQ0VAF6 134 aa13.48□□□□□ -0.25
SHISA4-201ENST00000362011 MEIG1Q5JSS6 88 aa13.47□□□□□ -0.25
SHISA4-201ENST00000362011 C10orf25Q5T742 122 aa13.47□□□□□ -0.25
SHISA4-201ENST00000362011 Q6ZRU5 148 aa13.47□□□□□ -0.25
SHISA4-201ENST00000362011 MIEN1Q9BRT3 115 aa13.47□□□□□ -0.25
SHISA4-201ENST00000362011 Q8N814 137 aa13.46□□□□□ -0.25
SHISA4-201ENST00000362011 CARD19Q96LW7 228 aa13.46□□□□□ -0.25
SHISA4-201ENST00000362011 TRBV30A0A0K0K1B3 111 aa13.45□□□□□ -0.26
SHISA4-201ENST00000362011 EREGO14944 169 aa13.45□□□□□ -0.26
SHISA4-201ENST00000362011 TNP2Q05952 138 aa13.45□□□□□ -0.26
SHISA4-201ENST00000362011 C6orf48Q9UBA6 75 aa13.45□□□□□ -0.26
SHISA4-201ENST00000362011 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.44□□□□□ -0.26
SHISA4-201ENST00000362011 LINC00587B1AMM8 73 aa13.44□□□□□ -0.26
SHISA4-201ENST00000362011 KRTAP4-5Q9BYR2 181 aa13.44□□□□□ -0.26
SHISA4-201ENST00000362011 ERG28Q9UKR5 140 aa13.44□□□□□ -0.26
SHISA4-201ENST00000362011 SLPIP03973 132 aa13.43□□□□□ -0.26
SHISA4-201ENST00000362011 CIRBPQ14011 172 aaKnown RBP13.43□□□□□ -0.26
SHISA4-201ENST00000362011 TIMM17BO60830 172 aa13.42□□□□□ -0.26
SHISA4-201ENST00000362011 HNRNPA3P51991 378 aaKnown RBP13.42□□□□□ -0.26
SHISA4-201ENST00000362011 CNBPP62633 177 aaKnown RBP13.42□□□□□ -0.26
SHISA4-201ENST00000362011 RNF151Q2KHN1 245 aa13.42□□□□□ -0.26
SHISA4-201ENST00000362011 C2orf91Q6ZV80 131 aa13.42□□□□□ -0.26
SHISA4-201ENST00000362011 HIGD1BQ9P298 99 aa13.42□□□□□ -0.26
SHISA4-201ENST00000362011 HSPG2P98160 4391 aa13.42□□□□□ -0.26
SHISA4-201ENST00000362011 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.41□□□□□ -0.26
SHISA4-201ENST00000362011 TMEM238C9JI98 176 aa13.41□□□□□ -0.26
SHISA4-201ENST00000362011 SMIM13P0DJ93 91 aa13.41□□□□□ -0.26
SHISA4-201ENST00000362011 C9orf116Q5BN46 136 aaPredicted RBP13.41□□□□□ -0.26
SHISA4-201ENST00000362011 PFN2P35080 140 aa13.4□□□□□ -0.26
SHISA4-201ENST00000362011 LINC00158P58513 81 aa13.4□□□□□ -0.26
SHISA4-201ENST00000362011 COX17Q14061 63 aa13.4□□□□□ -0.26
SHISA4-201ENST00000362011 A0A0U1RRA0 63 aa13.39□□□□□ -0.27
SHISA4-201ENST00000362011 LITAFQ99732 161 aa13.39□□□□□ -0.27
SHISA4-201ENST00000362011 SPANXB1Q9NS25 103 aaPredicted RBP13.39□□□□□ -0.27
SHISA4-201ENST00000362011 SPANXDQ9BXN6 97 aa13.37□□□□□ -0.27
SHISA4-201ENST00000362011 SPANXCQ9NY87 97 aa13.37□□□□□ -0.27
SHISA4-201ENST00000362011 ADAMTSL4-AS1Q5T5F5 129 aa13.36□□□□□ -0.27
SHISA4-201ENST00000362011 DDTP30046 118 aa13.35□□□□□ -0.27
SHISA4-201ENST00000362011 SRSF9Q13242 221 aaKnown RBP eCLIP13.35□□□□□ -0.27
SHISA4-201ENST00000362011 MIR7-3HGQ8N6C7 128 aa13.35□□□□□ -0.27
SHISA4-201ENST00000362011 NDUFC2-KCTD14E9PQ53 114 aa13.34□□□□□ -0.27
SHISA4-201ENST00000362011 TLX1NBP0CAT3 122 aa13.34□□□□□ -0.27
SHISA4-201ENST00000362011 Q6ZVH6 145 aa13.34□□□□□ -0.27
SHISA4-201ENST00000362011 DAND5Q8N907 189 aa13.34□□□□□ -0.27
SHISA4-201ENST00000362011 C9orf163Q8N9P6 203 aa13.34□□□□□ -0.27
SHISA4-201ENST00000362011 HIST1H4GQ99525 98 aa13.34□□□□□ -0.27
SHISA4-201ENST00000362011 LOC107984640A0A0U1RRK4 108 aa13.33□□□□□ -0.28
SHISA4-201ENST00000362011 TAL2Q16559 108 aa13.33□□□□□ -0.28
SHISA4-201ENST00000362011 LRP1BQ9NZR2 4599 aa13.32□□□□□ -0.28
SHISA4-201ENST00000362011 PKIGQ9Y2B9 76 aa13.32□□□□□ -0.28
SHISA4-201ENST00000362011 IGLV5-52A0A0A0MRZ9 124 aa13.31□□□□□ -0.28
SHISA4-201ENST00000362011 RPL18AQ02543 176 aaKnown RBP13.31□□□□□ -0.28
SHISA4-201ENST00000362011 HSD52Q0P140 79 aa13.31□□□□□ -0.28
SHISA4-201ENST00000362011 PCP4L1A6NKN8 68 aa13.3□□□□□ -0.28
SHISA4-201ENST00000362011 NPC2P61916 151 aa13.3□□□□□ -0.28
SHISA4-201ENST00000362011 CTAG1AP78358 180 aa13.3□□□□□ -0.28
SHISA4-201ENST00000362011 IFITM1P13164 125 aa13.29□□□□□ -0.28
SHISA4-201ENST00000362011 GCSHP23434 173 aa13.29□□□□□ -0.28
SHISA4-201ENST00000362011 Q6ZRP5 223 aa13.29□□□□□ -0.28
SHISA4-201ENST00000362011 COPS9Q8WXC6 57 aa13.29□□□□□ -0.28
SHISA4-201ENST00000362011 CDK2AP2O75956 126 aa13.28□□□□□ -0.28
SHISA4-201ENST00000362011 FUSP35637 526 aaKnown RBP eCLIP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms