RNA–Protein interactions for RNA: ENST00000358519.8

CNGA1-201, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNGA1, Length 2,627 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-201ENST00000358519 NDPQ00604 133 aa2.88□□□□□ -1.95
CNGA1-201ENST00000358519 FP248Q71RG6 208 aaPredicted RBP2.88□□□□□ -1.95
CNGA1-201ENST00000358519 C20orf197Q8N268 126 aa2.88□□□□□ -1.95
CNGA1-201ENST00000358519 BRK1Q8WUW1 75 aa2.88□□□□□ -1.95
CNGA1-201ENST00000358519 FAM218AQ96MZ4 157 aa2.88□□□□□ -1.95
CNGA1-201ENST00000358519 Q9HAA7 133 aa2.88□□□□□ -1.95
CNGA1-201ENST00000358519 UBE2D4Q9Y2X8 147 aa2.88□□□□□ -1.95
CNGA1-201ENST00000358519 IGLV4-3A0A075B6K6 122 aa2.88□□□□□ -1.95
CNGA1-201ENST00000358519 A0A087WWL8 130 aa2.88□□□□□ -1.95
CNGA1-201ENST00000358519 IGHV4-38-2P0DP08 117 aa2.88□□□□□ -1.95
CNGA1-201ENST00000358519 RPL11P62913 178 aaKnown RBP2.88□□□□□ -1.95
CNGA1-201ENST00000358519 VSIG2Q96IQ7 327 aa2.88□□□□□ -1.95
CNGA1-201ENST00000358519 C14orf132Q9NPU4 83 aa2.88□□□□□ -1.95
CNGA1-201ENST00000358519 SMIM26A0A096LP01 95 aa2.87□□□□□ -1.95
CNGA1-201ENST00000358519 IGHV3-49A0A0A0MS15 119 aa2.87□□□□□ -1.95
CNGA1-201ENST00000358519 RBMY1BA6NDE4 496 aaKnown RBP2.87□□□□□ -1.95
CNGA1-201ENST00000358519 RBMY1EA6NEQ0 496 aaKnown RBP2.87□□□□□ -1.95
CNGA1-201ENST00000358519 RBMY1DP0C7P1 496 aaKnown RBP2.87□□□□□ -1.95
CNGA1-201ENST00000358519 RBMY1A1P0DJD3 496 aaKnown RBP2.87□□□□□ -1.95
CNGA1-201ENST00000358519 RBMY1CP0DJD4 496 aa2.87□□□□□ -1.95
CNGA1-201ENST00000358519 RNASE4P34096 147 aaKnown RBP2.87□□□□□ -1.95
CNGA1-201ENST00000358519 XCL1P47992 114 aa2.87□□□□□ -1.95
CNGA1-201ENST00000358519 SLURP1P55000 103 aa2.87□□□□□ -1.95
CNGA1-201ENST00000358519 MRPS36P82909 103 aaKnown RBP2.87□□□□□ -1.95
CNGA1-201ENST00000358519 RBMY1FQ15415 496 aaKnown RBP2.87□□□□□ -1.95
CNGA1-201ENST00000358519 ECSCRQ19T08 205 aa2.87□□□□□ -1.95
CNGA1-201ENST00000358519 C9orf129Q5T035 196 aaKnown RBP2.87□□□□□ -1.95
CNGA1-201ENST00000358519 ZFAND2AQ8N6M9 145 aa2.87□□□□□ -1.95
CNGA1-201ENST00000358519 C20orf203Q8NBC4 194 aa2.87□□□□□ -1.95
CNGA1-201ENST00000358519 XCL2Q9UBD3 114 aa2.87□□□□□ -1.95
CNGA1-201ENST00000358519 ANK3Q12955 4377 aaKnown RBP2.87□□□□□ -1.95
CNGA1-201ENST00000358519 TRAV23DV6A0A075B6W5 121 aa2.87□□□□□ -1.95
CNGA1-201ENST00000358519 TRBV6-5A0A0K0K1A5 114 aa2.87□□□□□ -1.95
CNGA1-201ENST00000358519 KNCNA6PVL3 124 aa2.87□□□□□ -1.95
CNGA1-201ENST00000358519 H7BZZ5 65 aa2.87□□□□□ -1.95
CNGA1-201ENST00000358519 K7EQG2 157 aa2.87□□□□□ -1.95
CNGA1-201ENST00000358519 TIMM17BO60830 172 aa2.87□□□□□ -1.95
CNGA1-201ENST00000358519 TRBV12-3P01733 135 aa2.87□□□□□ -1.95
CNGA1-201ENST00000358519 RPL28P46779 137 aaKnown RBP2.87□□□□□ -1.95
CNGA1-201ENST00000358519 FAM74A4Q5TZK3 123 aa2.87□□□□□ -1.95
CNGA1-201ENST00000358519 LYPD5Q6UWN5 251 aa2.87□□□□□ -1.95
CNGA1-201ENST00000358519 LINC00308Q8TCZ7 52 aa2.87□□□□□ -1.95
CNGA1-201ENST00000358519 CUBNO60494 3623 aa2.86□□□□□ -1.95
CNGA1-201ENST00000358519 KLLNB2CW77 178 aa2.86□□□□□ -1.95
CNGA1-201ENST00000358519 HOXD3P31249 432 aaPredicted RBP2.86□□□□□ -1.95
CNGA1-201ENST00000358519 CLEC19AQ6UXS0 136 aa2.86□□□□□ -1.95
CNGA1-201ENST00000358519 LINC00482Q8N8I6 264 aa2.86□□□□□ -1.95
CNGA1-201ENST00000358519 IL17DQ8TAD2 202 aa2.86□□□□□ -1.95
CNGA1-201ENST00000358519 LINC00474Q9P2X8 69 aa2.86□□□□□ -1.95
CNGA1-201ENST00000358519 ROS1P08922 2347 aa2.86□□□□□ -1.95
CNGA1-201ENST00000358519 VPS13CQ709C8 3753 aa2.86□□□□□ -1.95
CNGA1-201ENST00000358519 A0A0U1RRA0 63 aa2.86□□□□□ -1.95
CNGA1-201ENST00000358519 ZNF561-AS1K7EIQ3 104 aa2.86□□□□□ -1.95
CNGA1-201ENST00000358519 DEFB1P60022 68 aa2.86□□□□□ -1.95
CNGA1-201ENST00000358519 RNASE13Q5GAN3 156 aaKnown RBP2.86□□□□□ -1.95
CNGA1-201ENST00000358519 WFDC9Q8NEX5 89 aa2.86□□□□□ -1.95
CNGA1-201ENST00000358519 FAM104AQ969W3 186 aa2.86□□□□□ -1.95
CNGA1-201ENST00000358519 DNAJC9-AS1A6NH13 148 aa2.85□□□□□ -1.95
CNGA1-201ENST00000358519 M0QY20 66 aa2.85□□□□□ -1.95
CNGA1-201ENST00000358519 LY6HO94772 140 aa2.85□□□□□ -1.95
CNGA1-201ENST00000358519 CD28P10747 220 aa2.85□□□□□ -1.95
CNGA1-201ENST00000358519 NDUFA1O15239 70 aa2.85□□□□□ -1.95
CNGA1-201ENST00000358519 IGHV4-59P01825 116 aa2.85□□□□□ -1.95
CNGA1-201ENST00000358519 SOSTDC1Q6X4U4 206 aa2.85□□□□□ -1.95
CNGA1-201ENST00000358519 FAM19A1Q7Z5A9 133 aa2.85□□□□□ -1.95
CNGA1-201ENST00000358519 ZNF625Q96I27 306 aaPredicted RBP2.85□□□□□ -1.95
CNGA1-201ENST00000358519 OBSCN-AS1Q96MR7 158 aa2.85□□□□□ -1.95
CNGA1-201ENST00000358519 RHPN1-AS1Q9BWJ2 59 aa2.85□□□□□ -1.95
CNGA1-201ENST00000358519 CCKP06307 115 aa2.84□□□□□ -1.95
CNGA1-201ENST00000358519 SS18Q15532 418 aa2.84□□□□□ -1.95
CNGA1-201ENST00000358519 C9orf66Q5T8R8 295 aa2.84□□□□□ -1.95
CNGA1-201ENST00000358519 A0A087WYN8 130 aa2.84□□□□□ -1.96
CNGA1-201ENST00000358519 TRBV7-6A0A0J9YX20 115 aa2.84□□□□□ -1.96
CNGA1-201ENST00000358519 F6UB75 175 aa2.84□□□□□ -1.96
CNGA1-201ENST00000358519 NCR3O14931 201 aa2.84□□□□□ -1.96
CNGA1-201ENST00000358519 KLKP1Q107X0 134 aa2.84□□□□□ -1.96
CNGA1-201ENST00000358519 ENHOQ6UWT2 76 aa2.84□□□□□ -1.96
CNGA1-201ENST00000358519 BRD3OSQ6XYD6 125 aa2.84□□□□□ -1.96
CNGA1-201ENST00000358519 F8WEM9 126 aa2.83□□□□□ -1.96
CNGA1-201ENST00000358519 G3V318 75 aa2.83□□□□□ -1.96
CNGA1-201ENST00000358519 RBM3P98179 157 aaKnown RBP2.83□□□□□ -1.96
CNGA1-201ENST00000358519 COPS9Q8WXC6 57 aa2.83□□□□□ -1.96
CNGA1-201ENST00000358519 Q9H8V8 135 aa2.83□□□□□ -1.96
CNGA1-201ENST00000358519 CDKN2A-AS1Q9UH64 79 aa2.83□□□□□ -1.96
CNGA1-201ENST00000358519 SNURFQ9Y675 71 aa2.83□□□□□ -1.96
CNGA1-201ENST00000358519 TENM1Q9UKZ4 2725 aa2.83□□□□□ -1.96
CNGA1-201ENST00000358519 SVEP1Q4LDE5 3571 aa2.83□□□□□ -1.96
CNGA1-201ENST00000358519 PROK1P58294 105 aa2.83□□□□□ -1.96
CNGA1-201ENST00000358519 S100A7L2Q5SY68 101 aa2.83□□□□□ -1.96
CNGA1-201ENST00000358519 RMI2Q96E14 147 aa2.83□□□□□ -1.96
CNGA1-201ENST00000358519 TRAV7A0A075B6U4 112 aa2.82□□□□□ -1.96
CNGA1-201ENST00000358519 A0A1W2PRX2 142 aa2.82□□□□□ -1.96
CNGA1-201ENST00000358519 INSP01308 110 aa2.82□□□□□ -1.96
CNGA1-201ENST00000358519 ATP5EP2Q5VTU8 51 aa2.82□□□□□ -1.96
CNGA1-201ENST00000358519 DYNLRB2Q8TF09 96 aa2.82□□□□□ -1.96
CNGA1-201ENST00000358519 OVOL2Q9BRP0 275 aa2.82□□□□□ -1.96
CNGA1-201ENST00000358519 BIRC6Q9NR09 4857 aa2.82□□□□□ -1.96
CNGA1-201ENST00000358519 TRBV10-1A0A0K0K1A3 114 aa2.82□□□□□ -1.96
CNGA1-201ENST00000358519 IGLV1-51P01701 117 aa2.82□□□□□ -1.96
CNGA1-201ENST00000358519 BLCAPP62952 87 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms