RNA–Protein interactions for RNA: ENST00000355371.8

SHTN1-202, Transcript of shootin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SHTN1, Length 5,361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-202ENST00000355371 C10orf25Q5T742 122 aa11.6□□□□□ -0.55
SHTN1-202ENST00000355371 REG3GQ6UW15 175 aa11.6□□□□□ -0.55
SHTN1-202ENST00000355371 V9GYY9 64 aa11.59□□□□□ -0.55
SHTN1-202ENST00000355371 A0A087WYN8 130 aa11.59□□□□□ -0.55
SHTN1-202ENST00000355371 SPINK6Q6UWN8 80 aa11.59□□□□□ -0.55
SHTN1-202ENST00000355371 MYO9AB2RTY4 2548 aa11.59□□□□□ -0.55
SHTN1-202ENST00000355371 C6orf223Q8N319 242 aa11.59□□□□□ -0.55
SHTN1-202ENST00000355371 LYPD5Q6UWN5 251 aa11.59□□□□□ -0.55
SHTN1-202ENST00000355371 MRPL55Q7Z7F7 128 aaKnown RBP11.58□□□□□ -0.56
SHTN1-202ENST00000355371 MPLKIPQ8TAP9 179 aa11.58□□□□□ -0.56
SHTN1-202ENST00000355371 IGLV9-49A0A0B4J1Y8 123 aa11.58□□□□□ -0.56
SHTN1-202ENST00000355371 C11orf72Q8NBR9 251 aa11.58□□□□□ -0.56
SHTN1-202ENST00000355371 FAM19A4Q96LR4 140 aa11.58□□□□□ -0.56
SHTN1-202ENST00000355371 SNURFQ9Y675 71 aa11.57□□□□□ -0.56
SHTN1-202ENST00000355371 PRR3P79522 188 aaKnown RBP11.57□□□□□ -0.56
SHTN1-202ENST00000355371 HRCT1Q6UXD1 115 aa11.57□□□□□ -0.56
SHTN1-202ENST00000355371 SRCAPQ6ZRS2 3230 aa11.57□□□□□ -0.56
SHTN1-202ENST00000355371 C1orf137Q5JT78 98 aa11.56□□□□□ -0.56
SHTN1-202ENST00000355371 CCDC179H3BU77 68 aa11.54□□□□□ -0.56
SHTN1-202ENST00000355371 COL4A2P08572 1712 aa11.54□□□□□ -0.56
SHTN1-202ENST00000355371 PRR15LQ9BU68 103 aa11.53□□□□□ -0.56
SHTN1-202ENST00000355371 PRYO14603 147 aa11.53□□□□□ -0.56
SHTN1-202ENST00000355371 TRAV7A0A075B6U4 112 aa11.52□□□□□ -0.57
SHTN1-202ENST00000355371 LINC00315P59091 139 aa11.51□□□□□ -0.57
SHTN1-202ENST00000355371 IGLV5-39A0A0G2JS06 123 aa11.51□□□□□ -0.57
SHTN1-202ENST00000355371 Q8N9L7 120 aa11.51□□□□□ -0.57
SHTN1-202ENST00000355371 FAM30AQ9NZY2 134 aa11.5□□□□□ -0.57
SHTN1-202ENST00000355371 SPTSSBQ8NFR3 76 aa11.49□□□□□ -0.57
SHTN1-202ENST00000355371 LINC00575Q6W349 94 aa11.49□□□□□ -0.57
SHTN1-202ENST00000355371 FHL3Q13643 280 aa11.47□□□□□ -0.57
SHTN1-202ENST00000355371 IGLV5-52A0A0A0MRZ9 124 aa11.47□□□□□ -0.57
SHTN1-202ENST00000355371 Q6ZRU5 148 aa11.45□□□□□ -0.58
SHTN1-202ENST00000355371 K7ERS5 55 aa11.45□□□□□ -0.58
SHTN1-202ENST00000355371 LINC00337Q8N6G1 96 aa11.45□□□□□ -0.58
SHTN1-202ENST00000355371 IGHV3OR16-9A0A0B4J2B5 98 aa11.44□□□□□ -0.58
SHTN1-202ENST00000355371 Q9BRP9 147 aa11.44□□□□□ -0.58
SHTN1-202ENST00000355371 CELA1Q9UNI1 258 aa11.44□□□□□ -0.58
SHTN1-202ENST00000355371 WDR87Q6ZQQ6 2873 aa11.43□□□□□ -0.58
SHTN1-202ENST00000355371 KLK9Q2XQG4 91 aa11.43□□□□□ -0.58
SHTN1-202ENST00000355371 A0A087WVE0 104 aa11.42□□□□□ -0.58
SHTN1-202ENST00000355371 NHLRC4P0CG21 123 aaPredicted RBP11.42□□□□□ -0.58
SHTN1-202ENST00000355371 SVIPQ8NHG7 77 aa11.42□□□□□ -0.58
SHTN1-202ENST00000355371 IGLV5-45A0A087WSX0 123 aa11.41□□□□□ -0.58
SHTN1-202ENST00000355371 PRR4Q16378 134 aa11.41□□□□□ -0.58
SHTN1-202ENST00000355371 ESRGQ1W209 222 aa11.41□□□□□ -0.58
SHTN1-202ENST00000355371 LINC01556Q5JQF7 62 aa11.4□□□□□ -0.58
SHTN1-202ENST00000355371 Q8N3U1 123 aa11.4□□□□□ -0.58
SHTN1-202ENST00000355371 C1orf134Q5TEV5 83 aa11.39□□□□□ -0.59
SHTN1-202ENST00000355371 TET2Q6N021 2002 aaPredicted RBP11.39□□□□□ -0.59
SHTN1-202ENST00000355371 CIRBP-AS1Q8TBR5 109 aa11.39□□□□□ -0.59
SHTN1-202ENST00000355371 SMIM26A0A096LP01 95 aa11.38□□□□□ -0.59
SHTN1-202ENST00000355371 H3BNG1 76 aa11.38□□□□□ -0.59
SHTN1-202ENST00000355371 CEP295Q9C0D2 2601 aa11.37□□□□□ -0.59
SHTN1-202ENST00000355371 Q6ZVQ6 151 aa11.37□□□□□ -0.59
SHTN1-202ENST00000355371 LINC00208Q96KT6 92 aa11.37□□□□□ -0.59
SHTN1-202ENST00000355371 SERP1Q9Y6X1 66 aa11.37□□□□□ -0.59
SHTN1-202ENST00000355371 AGRNO00468 2067 aa11.37□□□□□ -0.59
SHTN1-202ENST00000355371 ABCA12Q86UK0 2595 aa11.37□□□□□ -0.59
SHTN1-202ENST00000355371 ANKRD11Q6UB99 2663 aaPredicted RBP11.37□□□□□ -0.59
SHTN1-202ENST00000355371 USP9XQ93008 2570 aaPredicted RBP11.36□□□□□ -0.59
SHTN1-202ENST00000355371 A0A087WSZ3 146 aa11.36□□□□□ -0.59
SHTN1-202ENST00000355371 LINC00846Q9NV44 126 aa11.36□□□□□ -0.59
SHTN1-202ENST00000355371 C22orf24Q9Y442 160 aa11.35□□□□□ -0.59
SHTN1-202ENST00000355371 PTPRBP23467 1997 aa11.35□□□□□ -0.59
SHTN1-202ENST00000355371 A8MTW9 85 aa11.35□□□□□ -0.59
SHTN1-202ENST00000355371 LINC01547P58512 204 aaPredicted RBP11.35□□□□□ -0.59
SHTN1-202ENST00000355371 A6NED7 52 aa11.34□□□□□ -0.59
SHTN1-202ENST00000355371 IGHV6-1A0A0B4J1U7 121 aa11.34□□□□□ -0.59
SHTN1-202ENST00000355371 X6R8D5 127 aa11.34□□□□□ -0.59
SHTN1-202ENST00000355371 FSHBP01225 129 aa11.32□□□□□ -0.6
SHTN1-202ENST00000355371 CXCL6P80162 114 aa11.32□□□□□ -0.6
SHTN1-202ENST00000355371 JMJD1CQ15652 2540 aa11.32□□□□□ -0.6
SHTN1-202ENST00000355371 TRBV7-7A0A0K0K1E9 115 aa11.31□□□□□ -0.6
SHTN1-202ENST00000355371 SMCR5Q8TEV8 140 aa11.3□□□□□ -0.6
SHTN1-202ENST00000355371 TRBV7-6A0A0J9YX20 115 aa11.3□□□□□ -0.6
SHTN1-202ENST00000355371 A0A0U1RQV1 116 aa11.29□□□□□ -0.6
SHTN1-202ENST00000355371 PRLHP81277 87 aa11.29□□□□□ -0.6
SHTN1-202ENST00000355371 C6orf48Q9UBA6 75 aa11.29□□□□□ -0.6
SHTN1-202ENST00000355371 CDIP1Q9H305 208 aa11.29□□□□□ -0.6
SHTN1-202ENST00000355371 HCG22E2RYF7 251 aa11.28□□□□□ -0.6
SHTN1-202ENST00000355371 COL27A1Q8IZC6 1860 aaPredicted RBP11.28□□□□□ -0.6
SHTN1-202ENST00000355371 TLN2Q9Y4G6 2542 aa11.27□□□□□ -0.6
SHTN1-202ENST00000355371 KIAA0087Q14695 138 aa11.25□□□□□ -0.61
SHTN1-202ENST00000355371 TMEM254Q8TBM7 123 aa11.25□□□□□ -0.61
SHTN1-202ENST00000355371 H0Y9P7 68 aa11.25□□□□□ -0.61
SHTN1-202ENST00000355371 Q9UF83 564 aa11.25□□□□□ -0.61
SHTN1-202ENST00000355371 SOSTDC1Q6X4U4 206 aa11.24□□□□□ -0.61
SHTN1-202ENST00000355371 SPATA3Q8NHX4 192 aa11.24□□□□□ -0.61
SHTN1-202ENST00000355371 USP9YO00507 2555 aaPredicted RBP11.24□□□□□ -0.61
SHTN1-202ENST00000355371 LRRK2Q5S007 2527 aa11.24□□□□□ -0.61
SHTN1-202ENST00000355371 LINC00167Q96N53 147 aa11.24□□□□□ -0.61
SHTN1-202ENST00000355371 A0A1B0GW54 56 aa11.24□□□□□ -0.61
SHTN1-202ENST00000355371 MDFIQ99750 246 aa11.24□□□□□ -0.61
SHTN1-202ENST00000355371 LIMD2Q9BT23 127 aa11.24□□□□□ -0.61
SHTN1-202ENST00000355371 FN1P02751 2386 aaKnown RBP11.23□□□□□ -0.61
SHTN1-202ENST00000355371 PCSK5Q92824 1860 aa11.23□□□□□ -0.61
SHTN1-202ENST00000355371 SMCPP49901 116 aaPredicted RBP11.23□□□□□ -0.61
SHTN1-202ENST00000355371 ELOF1P60002 83 aaKnown RBP11.22□□□□□ -0.61
SHTN1-202ENST00000355371 ZFYVE26Q68DK2 2539 aa11.22□□□□□ -0.61
SHTN1-202ENST00000355371 DEFB116Q30KQ4 102 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms