RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 A0A1W2PPM0 123 aa9.11□□□□□ -0.95
CDC42-202ENST00000344548 C6orf223Q8N319 242 aa9.11□□□□□ -0.95
CDC42-202ENST00000344548 C15orf53Q8NAA6 179 aa9.11□□□□□ -0.95
CDC42-202ENST00000344548 A6NJY4 79 aa9.1□□□□□ -0.95
CDC42-202ENST00000344548 HERV-K104P63124 156 aa9.1□□□□□ -0.95
CDC42-202ENST00000344548 LINC01556Q5JQF7 62 aa9.1□□□□□ -0.95
CDC42-202ENST00000344548 LINC00308Q8TCZ7 52 aa9.1□□□□□ -0.95
CDC42-202ENST00000344548 PGPEP1Q9NXJ5 209 aa9.1□□□□□ -0.95
CDC42-202ENST00000344548 CRPP02741 224 aa9.1□□□□□ -0.95
CDC42-202ENST00000344548 MALP21145 153 aa9.1□□□□□ -0.95
CDC42-202ENST00000344548 Q8IZM0 81 aa9.1□□□□□ -0.95
CDC42-202ENST00000344548 DNAH1Q9P2D7 4330 aa9.1□□□□□ -0.95
CDC42-202ENST00000344548 TSPAN13O95857 204 aa9.09□□□□□ -0.95
CDC42-202ENST00000344548 UBE2V1Q13404 147 aa9.09□□□□□ -0.95
CDC42-202ENST00000344548 DNAH10OSP0CZ25 163 aa9.08□□□□□ -0.96
CDC42-202ENST00000344548 PFN2P35080 140 aa9.08□□□□□ -0.96
CDC42-202ENST00000344548 RPL24P83731 157 aaKnown RBP9.08□□□□□ -0.96
CDC42-202ENST00000344548 LINC01561Q8N1V8 128 aa9.08□□□□□ -0.96
CDC42-202ENST00000344548 MIR7-3HGQ8N6C7 128 aa9.08□□□□□ -0.96
CDC42-202ENST00000344548 CIRBPQ14011 172 aaKnown RBP9.08□□□□□ -0.96
CDC42-202ENST00000344548 C9orf116Q5BN46 136 aaPredicted RBP9.08□□□□□ -0.96
CDC42-202ENST00000344548 C10orf25Q5T742 122 aa9.08□□□□□ -0.96
CDC42-202ENST00000344548 DNAH7Q8WXX0 4024 aa9.08□□□□□ -0.96
CDC42-202ENST00000344548 DYNC2H1Q8NCM8 4307 aaKnown RBP9.07□□□□□ -0.96
CDC42-202ENST00000344548 PRO1854Q9UHT4 67 aa9.07□□□□□ -0.96
CDC42-202ENST00000344548 CBY1Q9Y3M2 126 aa9.07□□□□□ -0.96
CDC42-202ENST00000344548 PLECQ15149 4684 aaKnown RBP9.06□□□□□ -0.96
CDC42-202ENST00000344548 LINC00158P58513 81 aa9.06□□□□□ -0.96
CDC42-202ENST00000344548 Q9HAA7 133 aa9.06□□□□□ -0.96
CDC42-202ENST00000344548 TRAV8-4A0A0B4J246 113 aa9.06□□□□□ -0.96
CDC42-202ENST00000344548 H7C2G1 150 aa9.06□□□□□ -0.96
CDC42-202ENST00000344548 CCL18P55774 89 aa9.05□□□□□ -0.96
CDC42-202ENST00000344548 UNQ6190/PRO20217Q6UXQ8 127 aa9.05□□□□□ -0.96
CDC42-202ENST00000344548 ERG28Q9UKR5 140 aa9.05□□□□□ -0.96
CDC42-202ENST00000344548 KLK5Q9Y337 293 aaPredicted RBP9.05□□□□□ -0.96
CDC42-202ENST00000344548 A0A0B4J2C4 111 aa9.05□□□□□ -0.96
CDC42-202ENST00000344548 IFITM1P13164 125 aa9.05□□□□□ -0.96
CDC42-202ENST00000344548 CKS1BP61024 79 aa9.05□□□□□ -0.96
CDC42-202ENST00000344548 SPAG11BQ08648 103 aa9.05□□□□□ -0.96
CDC42-202ENST00000344548 APLNQ9ULZ1 77 aa9.05□□□□□ -0.96
CDC42-202ENST00000344548 SPCS1Q9Y6A9 102 aa9.05□□□□□ -0.96
CDC42-202ENST00000344548 FBN3Q75N90 2809 aa9.05□□□□□ -0.96
CDC42-202ENST00000344548 GAGE10A6NGK3 116 aa9.04□□□□□ -0.96
CDC42-202ENST00000344548 IBA57-AS1B1ANH7 110 aa9.04□□□□□ -0.96
CDC42-202ENST00000344548 K7EP34 96 aa9.03□□□□□ -0.96
CDC42-202ENST00000344548 FABP2P12104 132 aa9.03□□□□□ -0.96
CDC42-202ENST00000344548 HIGD2BQ4VC39 106 aa9.03□□□□□ -0.96
CDC42-202ENST00000344548 IGKV2D-24A0A075B6R9 120 aa9.03□□□□□ -0.96
CDC42-202ENST00000344548 CASC10Q5T4H9 136 aa9.03□□□□□ -0.96
CDC42-202ENST00000344548 STARD9Q9P2P6 4700 aa9.03□□□□□ -0.96
CDC42-202ENST00000344548 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.02□□□□□ -0.96
CDC42-202ENST00000344548 NHLRC4P0CG21 123 aaPredicted RBP9.02□□□□□ -0.96
CDC42-202ENST00000344548 CFAP161Q6P656 301 aa9.02□□□□□ -0.96
CDC42-202ENST00000344548 C15orf56Q8N910 161 aa9.02□□□□□ -0.96
CDC42-202ENST00000344548 KRTAP1-5Q9BYS1 174 aa9.02□□□□□ -0.97
CDC42-202ENST00000344548 DNAH10Q8IVF4 4471 aa9.02□□□□□ -0.97
CDC42-202ENST00000344548 UPK3BQ9BT76 320 aa9.01□□□□□ -0.97
CDC42-202ENST00000344548 C1orf43Q9BWL3 253 aa9.01□□□□□ -0.97
CDC42-202ENST00000344548 LOC107984156A0A0G2JMH3 177 aa9.01□□□□□ -0.97
CDC42-202ENST00000344548 KRTAP21-3Q3LHN1 58 aa9.01□□□□□ -0.97
CDC42-202ENST00000344548 ARL17AQ8IVW1 177 aa9.01□□□□□ -0.97
CDC42-202ENST00000344548 IGKV2-28A0A075B6P5 120 aa9□□□□□ -0.97
CDC42-202ENST00000344548 IGKV2D-28P01615 120 aa9□□□□□ -0.97
CDC42-202ENST00000344548 NTN5Q8WTR8 489 aaPredicted RBP9□□□□□ -0.97
CDC42-202ENST00000344548 H3BMG7 143 aa8.99□□□□□ -0.97
CDC42-202ENST00000344548 Q8NDZ9 215 aa8.99□□□□□ -0.97
CDC42-202ENST00000344548 CXCL5P42830 114 aa8.98□□□□□ -0.97
CDC42-202ENST00000344548 PCP4P48539 62 aa8.98□□□□□ -0.97
CDC42-202ENST00000344548 MTURNQ8N3F0 131 aa8.98□□□□□ -0.97
CDC42-202ENST00000344548 SND1-IT1Q9HBX3 110 aa8.98□□□□□ -0.97
CDC42-202ENST00000344548 C6orf48Q9UBA6 75 aa8.98□□□□□ -0.97
CDC42-202ENST00000344548 RPL13AP40429 203 aaKnown RBP8.98□□□□□ -0.97
CDC42-202ENST00000344548 PRR3P79522 188 aaKnown RBP8.98□□□□□ -0.97
CDC42-202ENST00000344548 LINC00337Q8N6G1 96 aa8.98□□□□□ -0.97
CDC42-202ENST00000344548 TGP01266 2768 aa8.98□□□□□ -0.97
CDC42-202ENST00000344548 TRIAP1O43715 76 aa8.97□□□□□ -0.97
CDC42-202ENST00000344548 C21orf62-AS1Q17RA5 79 aa8.97□□□□□ -0.97
CDC42-202ENST00000344548 GTF2H5Q6ZYL4 71 aa8.97□□□□□ -0.97
CDC42-202ENST00000344548 Q1RN00 199 aa8.97□□□□□ -0.97
CDC42-202ENST00000344548 TCL1BO95988 128 aa8.96□□□□□ -0.97
CDC42-202ENST00000344548 Q6ZRU5 148 aa8.96□□□□□ -0.98
CDC42-202ENST00000344548 PSMB2P49721 201 aa8.95□□□□□ -0.98
CDC42-202ENST00000344548 ZNF561-AS1K7EIQ3 104 aa8.94□□□□□ -0.98
CDC42-202ENST00000344548 LECT2O14960 151 aa8.94□□□□□ -0.98
CDC42-202ENST00000344548 SLPIP03973 132 aa8.94□□□□□ -0.98
CDC42-202ENST00000344548 COX17Q14061 63 aa8.94□□□□□ -0.98
CDC42-202ENST00000344548 CAMK2N2Q96S95 79 aa8.94□□□□□ -0.98
CDC42-202ENST00000344548 PPDPFQ9H3Y8 114 aa8.94□□□□□ -0.98
CDC42-202ENST00000344548 TRBV30A0A0K0K1B3 111 aa8.93□□□□□ -0.98
CDC42-202ENST00000344548 SCGB1C2P0DMR2 95 aa8.93□□□□□ -0.98
CDC42-202ENST00000344548 UBE2DNLQ8IWF7 75 aa8.93□□□□□ -0.98
CDC42-202ENST00000344548 GVQW2A0A096LPI5 108 aaPredicted RBP8.92□□□□□ -0.98
CDC42-202ENST00000344548 NUPR2A6NF83 97 aa8.92□□□□□ -0.98
CDC42-202ENST00000344548 WFDC2Q14508 124 aa8.92□□□□□ -0.98
CDC42-202ENST00000344548 COPS9Q8WXC6 57 aa8.92□□□□□ -0.98
CDC42-202ENST00000344548 XAGE1AQ9HD64 81 aa8.92□□□□□ -0.98
CDC42-202ENST00000344548 PRO0461Q9UI25 63 aa8.92□□□□□ -0.98
CDC42-202ENST00000344548 CLEC2BQ92478 149 aa8.91□□□□□ -0.98
CDC42-202ENST00000344548 USP17L23D6RBM5 183 aa8.91□□□□□ -0.98
CDC42-202ENST00000344548 VPS13DQ5THJ4 4388 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms