RNA–Protein interactions for RNA: ENST00000342665.4

SOX12-201, Transcript of SRY-box 12, humanhuman

APPRIS P1 BASIC

Gene SOX12, Length 4,630 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX12-201ENST00000342665 DHRS4-AS1Q9P1J3 65 aa14.28□□□□□ -0.12
SOX12-201ENST00000342665 IGLV2-33A0A075B6J2 118 aaPredicted RBP14.27□□□□□ -0.12
SOX12-201ENST00000342665 C9orf116Q5BN46 136 aaPredicted RBP14.27□□□□□ -0.12
SOX12-201ENST00000342665 A0A096LNI7 61 aa14.27□□□□□ -0.13
SOX12-201ENST00000342665 NANOS2P60321 138 aaKnown RBP14.26□□□□□ -0.13
SOX12-201ENST00000342665 NTM-AS1Q6ZSK4 140 aa14.26□□□□□ -0.13
SOX12-201ENST00000342665 A0A0J9YWU9 116 aa14.25□□□□□ -0.13
SOX12-201ENST00000342665 MKI67P46013 3256 aaKnown RBP14.25□□□□□ -0.13
SOX12-201ENST00000342665 Q6JHZ5 121 aa14.24□□□□□ -0.13
SOX12-201ENST00000342665 C3orf84H3BNL1 204 aa14.24□□□□□ -0.13
SOX12-201ENST00000342665 Q8N814 137 aa14.24□□□□□ -0.13
SOX12-201ENST00000342665 IGLV5-39A0A0G2JS06 123 aa14.22□□□□□ -0.13
SOX12-201ENST00000342665 PRB2P02812 416 aaPredicted RBP14.22□□□□□ -0.13
SOX12-201ENST00000342665 PRR3P79522 188 aaKnown RBP14.22□□□□□ -0.13
SOX12-201ENST00000342665 COX7CP15954 63 aa14.22□□□□□ -0.13
SOX12-201ENST00000342665 LOC107984640A0A0U1RRK4 108 aa14.21□□□□□ -0.13
SOX12-201ENST00000342665 COL27A1Q8IZC6 1860 aaPredicted RBP14.21□□□□□ -0.14
SOX12-201ENST00000342665 TRBV10-3A0A0K0K1G6 114 aa14.21□□□□□ -0.14
SOX12-201ENST00000342665 M0QXV9 152 aa14.21□□□□□ -0.14
SOX12-201ENST00000342665 NDUFC2O95298 119 aa14.2□□□□□ -0.14
SOX12-201ENST00000342665 C4orf48Q5BLP8 95 aa14.2□□□□□ -0.14
SOX12-201ENST00000342665 CHD9Q3L8U1 2897 aa14.2□□□□□ -0.14
SOX12-201ENST00000342665 A0A087WYN8 130 aa14.2□□□□□ -0.14
SOX12-201ENST00000342665 FAM236DA0A1B0GTK5 79 aa14.2□□□□□ -0.14
SOX12-201ENST00000342665 FAM236CP0DP71 79 aa14.2□□□□□ -0.14
SOX12-201ENST00000342665 LINC01561Q8N1V8 128 aa14.19□□□□□ -0.14
SOX12-201ENST00000342665 BRCA2P51587 3418 aa14.19□□□□□ -0.14
SOX12-201ENST00000342665 CCDC179H3BU77 68 aa14.19□□□□□ -0.14
SOX12-201ENST00000342665 RETNQ9HD89 108 aa14.19□□□□□ -0.14
SOX12-201ENST00000342665 Q6ZTC4 211 aa14.18□□□□□ -0.14
SOX12-201ENST00000342665 RPL37AP8A6NKH3 93 aa14.18□□□□□ -0.14
SOX12-201ENST00000342665 LAMA3Q16787 3333 aa14.18□□□□□ -0.14
SOX12-201ENST00000342665 A0A0C4DFX4 3053 aa14.17□□□□□ -0.14
SOX12-201ENST00000342665 IGHV3OR16-9A0A0B4J2B5 98 aa14.17□□□□□ -0.14
SOX12-201ENST00000342665 C5orf47Q569G3 176 aa14.16□□□□□ -0.14
SOX12-201ENST00000342665 FHL3Q13643 280 aa14.16□□□□□ -0.14
SOX12-201ENST00000342665 LINC00337Q8N6G1 96 aa14.15□□□□□ -0.14
SOX12-201ENST00000342665 FAM19A3Q7Z5A8 133 aa14.13□□□□□ -0.15
SOX12-201ENST00000342665 Q9UF83 564 aa14.12□□□□□ -0.15
SOX12-201ENST00000342665 IGLV5-45A0A087WSX0 123 aa14.12□□□□□ -0.15
SOX12-201ENST00000342665 CHKB-CPT1BH3BT56 60 aa14.12□□□□□ -0.15
SOX12-201ENST00000342665 NDUFC1O43677 76 aa14.12□□□□□ -0.15
SOX12-201ENST00000342665 LYPD5Q6UWN5 251 aa14.11□□□□□ -0.15
SOX12-201ENST00000342665 C6orf223Q8N319 242 aa14.11□□□□□ -0.15
SOX12-201ENST00000342665 LAMA2P24043 3122 aaKnown RBP14.11□□□□□ -0.15
SOX12-201ENST00000342665 NDUFC2-KCTD14E9PQ53 114 aa14.11□□□□□ -0.15
SOX12-201ENST00000342665 FLNBO75369 2602 aaKnown RBP14.1□□□□□ -0.15
SOX12-201ENST00000342665 PPDPFQ9H3Y8 114 aa14.09□□□□□ -0.15
SOX12-201ENST00000342665 WFDC10BQ8IUB3 73 aa14.08□□□□□ -0.16
SOX12-201ENST00000342665 C2orf48Q96LS8 159 aa14.08□□□□□ -0.16
SOX12-201ENST00000342665 IGKV4-1P06312 121 aa14.07□□□□□ -0.16
SOX12-201ENST00000342665 CDIP1Q9H305 208 aa14.07□□□□□ -0.16
SOX12-201ENST00000342665 FSHBP01225 129 aa14.07□□□□□ -0.16
SOX12-201ENST00000342665 F8WDY8 70 aa14.06□□□□□ -0.16
SOX12-201ENST00000342665 SMCPP49901 116 aaPredicted RBP14.06□□□□□ -0.16
SOX12-201ENST00000342665 A0A087WVE0 104 aa14.05□□□□□ -0.16
SOX12-201ENST00000342665 PRO0461Q9UI25 63 aa14.05□□□□□ -0.16
SOX12-201ENST00000342665 SNURFQ9Y675 71 aa14.05□□□□□ -0.16
SOX12-201ENST00000342665 LINC00575Q6W349 94 aa14.04□□□□□ -0.16
SOX12-201ENST00000342665 BPTFQ12830 3046 aa14.03□□□□□ -0.16
SOX12-201ENST00000342665 LINC00474Q9P2X8 69 aa14.03□□□□□ -0.16
SOX12-201ENST00000342665 F8P00451 2351 aa14.03□□□□□ -0.16
SOX12-201ENST00000342665 ATP5EP56381 51 aaPredicted RBP14.02□□□□□ -0.17
SOX12-201ENST00000342665 WFDC13Q8IUB5 93 aa14.02□□□□□ -0.17
SOX12-201ENST00000342665 M0R2N4 97 aa14.01□□□□□ -0.17
SOX12-201ENST00000342665 C1orf137Q5JT78 98 aa14.01□□□□□ -0.17
SOX12-201ENST00000342665 TRAV7A0A075B6U4 112 aa14□□□□□ -0.17
SOX12-201ENST00000342665 LINC00846Q9NV44 126 aa14□□□□□ -0.17
SOX12-201ENST00000342665 CELA1Q9UNI1 258 aa13.99□□□□□ -0.17
SOX12-201ENST00000342665 ZNF706Q9Y5V0 76 aaPredicted RBP13.99□□□□□ -0.17
SOX12-201ENST00000342665 PLAC8L1A1L4L8 177 aa13.99□□□□□ -0.17
SOX12-201ENST00000342665 SOSTDC1Q6X4U4 206 aa13.98□□□□□ -0.17
SOX12-201ENST00000342665 Q6ZRU5 148 aa13.98□□□□□ -0.17
SOX12-201ENST00000342665 A8MTW9 85 aa13.98□□□□□ -0.17
SOX12-201ENST00000342665 C7orf33Q8WU49 177 aa13.97□□□□□ -0.17
SOX12-201ENST00000342665 X6R8D5 127 aa13.96□□□□□ -0.17
SOX12-201ENST00000342665 LRCOL1A6NCL2 159 aa13.96□□□□□ -0.18
SOX12-201ENST00000342665 MPLKIPQ8TAP9 179 aa13.96□□□□□ -0.18
SOX12-201ENST00000342665 BRK1Q8WUW1 75 aa13.96□□□□□ -0.18
SOX12-201ENST00000342665 REG3GQ6UW15 175 aa13.95□□□□□ -0.18
SOX12-201ENST00000342665 TRANK1O15050 2925 aa13.95□□□□□ -0.18
SOX12-201ENST00000342665 TRBV7-7A0A0K0K1E9 115 aa13.94□□□□□ -0.18
SOX12-201ENST00000342665 SBSPONQ8IVN8 264 aa13.94□□□□□ -0.18
SOX12-201ENST00000342665 Q8N3U1 123 aa13.94□□□□□ -0.18
SOX12-201ENST00000342665 HECTD1Q9ULT8 2610 aa13.93□□□□□ -0.18
SOX12-201ENST00000342665 UNC80Q8N2C7 3258 aa13.92□□□□□ -0.18
SOX12-201ENST00000342665 CFAP54Q96N23 3096 aa13.92□□□□□ -0.18
SOX12-201ENST00000342665 USP24Q9UPU5 2620 aa13.92□□□□□ -0.18
SOX12-201ENST00000342665 PRUNE2Q8WUY3 3088 aa13.91□□□□□ -0.18
SOX12-201ENST00000342665 Q6ZVQ6 151 aa13.91□□□□□ -0.18
SOX12-201ENST00000342665 PRYO14603 147 aa13.91□□□□□ -0.18
SOX12-201ENST00000342665 NUPR2A6NF83 97 aa13.9□□□□□ -0.18
SOX12-201ENST00000342665 SPINK6Q6UWN8 80 aa13.9□□□□□ -0.18
SOX12-201ENST00000342665 MRPL55Q7Z7F7 128 aaKnown RBP13.9□□□□□ -0.18
SOX12-201ENST00000342665 C10orf25Q5T742 122 aa13.89□□□□□ -0.19
SOX12-201ENST00000342665 IGLV9-49A0A0B4J1Y8 123 aa13.88□□□□□ -0.19
SOX12-201ENST00000342665 LINC01556Q5JQF7 62 aa13.88□□□□□ -0.19
SOX12-201ENST00000342665 FAM218AQ96MZ4 157 aa13.87□□□□□ -0.19
SOX12-201ENST00000342665 FAM30AQ9NZY2 134 aa13.87□□□□□ -0.19
SOX12-201ENST00000342665 LITAFQ99732 161 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms