RNA–Protein interactions for RNA: ENST00000340648.5

RRP1B-201, Transcript of ribosomal RNA processing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP1B, Length 5,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-201ENST00000340648 HIGD2AQ9BW72 106 aa10.51□□□□□ -0.73
RRP1B-201ENST00000340648 NDUFC1O43677 76 aa10.51□□□□□ -0.73
RRP1B-201ENST00000340648 SHISA2Q6UWI4 295 aa10.51□□□□□ -0.73
RRP1B-201ENST00000340648 TRAV7A0A075B6U4 112 aa10.5□□□□□ -0.73
RRP1B-201ENST00000340648 LELP1Q5T871 98 aa10.5□□□□□ -0.73
RRP1B-201ENST00000340648 NDUFB1O75438 58 aa10.5□□□□□ -0.73
RRP1B-201ENST00000340648 FAM19A3Q7Z5A8 133 aa10.5□□□□□ -0.73
RRP1B-201ENST00000340648 M0R378 163 aa10.5□□□□□ -0.73
RRP1B-201ENST00000340648 SYCNQ0VAF6 134 aa10.5□□□□□ -0.73
RRP1B-201ENST00000340648 TRBV10-3A0A0K0K1G6 114 aa10.49□□□□□ -0.73
RRP1B-201ENST00000340648 ZNF843Q8N446 348 aa10.49□□□□□ -0.73
RRP1B-201ENST00000340648 UBE2AP49459 152 aa10.49□□□□□ -0.73
RRP1B-201ENST00000340648 KRTAP10-9P60411 292 aa10.49□□□□□ -0.73
RRP1B-201ENST00000340648 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.49□□□□□ -0.73
RRP1B-201ENST00000340648 A8MTW9 85 aa10.49□□□□□ -0.73
RRP1B-201ENST00000340648 LITAFQ99732 161 aa10.48□□□□□ -0.73
RRP1B-201ENST00000340648 H0Y9J4 135 aa10.48□□□□□ -0.73
RRP1B-201ENST00000340648 SVIPQ8NHG7 77 aa10.48□□□□□ -0.73
RRP1B-201ENST00000340648 IGLV5-45A0A087WSX0 123 aa10.47□□□□□ -0.73
RRP1B-201ENST00000340648 C11orf45Q8TAV5 145 aa10.47□□□□□ -0.73
RRP1B-201ENST00000340648 ATP5EP56381 51 aaPredicted RBP10.47□□□□□ -0.73
RRP1B-201ENST00000340648 CFAP54Q96N23 3096 aa10.46□□□□□ -0.73
RRP1B-201ENST00000340648 IGLV1-51P01701 117 aa10.46□□□□□ -0.73
RRP1B-201ENST00000340648 C6orf223Q8N319 242 aa10.46□□□□□ -0.73
RRP1B-201ENST00000340648 A0A096LNI7 61 aa10.46□□□□□ -0.74
RRP1B-201ENST00000340648 PRR4Q16378 134 aa10.45□□□□□ -0.74
RRP1B-201ENST00000340648 Q8N3U1 123 aa10.45□□□□□ -0.74
RRP1B-201ENST00000340648 DEFB131BA0A096LNP1 70 aa10.45□□□□□ -0.74
RRP1B-201ENST00000340648 CELA1Q9UNI1 258 aa10.44□□□□□ -0.74
RRP1B-201ENST00000340648 WFDC10BQ8IUB3 73 aa10.44□□□□□ -0.74
RRP1B-201ENST00000340648 SERP1Q9Y6X1 66 aa10.44□□□□□ -0.74
RRP1B-201ENST00000340648 SPTBN4Q9H254 2564 aa10.44□□□□□ -0.74
RRP1B-201ENST00000340648 KPRPQ5T749 579 aaPredicted RBP10.44□□□□□ -0.74
RRP1B-201ENST00000340648 IGHV3OR16-9A0A0B4J2B5 98 aa10.44□□□□□ -0.74
RRP1B-201ENST00000340648 RPL37AP8A6NKH3 93 aa10.44□□□□□ -0.74
RRP1B-201ENST00000340648 KIR2DL5BQ8NHK3 375 aa10.44□□□□□ -0.74
RRP1B-201ENST00000340648 PKD1L2Q7Z442 2459 aa10.43□□□□□ -0.74
RRP1B-201ENST00000340648 SMIM26A0A096LP01 95 aa10.43□□□□□ -0.74
RRP1B-201ENST00000340648 KLK9Q2XQG4 91 aa10.43□□□□□ -0.74
RRP1B-201ENST00000340648 POLQO75417 2590 aa10.43□□□□□ -0.74
RRP1B-201ENST00000340648 FAM30AQ9NZY2 134 aa10.43□□□□□ -0.74
RRP1B-201ENST00000340648 MUC7Q8TAX7 377 aa10.43□□□□□ -0.74
RRP1B-201ENST00000340648 Q6ZVQ6 151 aa10.42□□□□□ -0.74
RRP1B-201ENST00000340648 LINC00575Q6W349 94 aa10.41□□□□□ -0.74
RRP1B-201ENST00000340648 INAFM1C9JVW0 142 aa10.41□□□□□ -0.74
RRP1B-201ENST00000340648 WFDC13Q8IUB5 93 aa10.41□□□□□ -0.74
RRP1B-201ENST00000340648 A0A1B0GUV1 79 aa10.41□□□□□ -0.74
RRP1B-201ENST00000340648 CRYGAP11844 174 aa10.41□□□□□ -0.74
RRP1B-201ENST00000340648 EIF4EBP3O60516 100 aaPredicted RBP10.4□□□□□ -0.74
RRP1B-201ENST00000340648 TRANK1O15050 2925 aa10.4□□□□□ -0.74
RRP1B-201ENST00000340648 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.39□□□□□ -0.75
RRP1B-201ENST00000340648 LINC01547P58512 204 aaPredicted RBP10.39□□□□□ -0.75
RRP1B-201ENST00000340648 SPTSSBQ8NFR3 76 aa10.39□□□□□ -0.75
RRP1B-201ENST00000340648 DHRS4-AS1Q9P1J3 65 aa10.39□□□□□ -0.75
RRP1B-201ENST00000340648 SMCR5Q8TEV8 140 aa10.38□□□□□ -0.75
RRP1B-201ENST00000340648 NHLRC4P0CG21 123 aaPredicted RBP10.38□□□□□ -0.75
RRP1B-201ENST00000340648 LRCOL1A6NCL2 159 aa10.37□□□□□ -0.75
RRP1B-201ENST00000340648 JMJD1CQ15652 2540 aa10.37□□□□□ -0.75
RRP1B-201ENST00000340648 EGFEM1PQ0D2K5 195 aa10.36□□□□□ -0.75
RRP1B-201ENST00000340648 MTORP42345 2549 aa10.36□□□□□ -0.75
RRP1B-201ENST00000340648 CHKB-CPT1BH3BT56 60 aa10.35□□□□□ -0.75
RRP1B-201ENST00000340648 B9D2Q9BPU9 175 aa10.35□□□□□ -0.75
RRP1B-201ENST00000340648 MUC4Q99102 2169 aa10.34□□□□□ -0.75
RRP1B-201ENST00000340648 LRRK2Q5S007 2527 aa10.34□□□□□ -0.75
RRP1B-201ENST00000340648 A0A0J9YWU9 116 aa10.33□□□□□ -0.76
RRP1B-201ENST00000340648 PRYO14603 147 aa10.33□□□□□ -0.76
RRP1B-201ENST00000340648 IGKV4-1P06312 121 aa10.33□□□□□ -0.76
RRP1B-201ENST00000340648 IGHV4-30-4P0DP06 118 aa10.33□□□□□ -0.76
RRP1B-201ENST00000340648 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.33□□□□□ -0.76
RRP1B-201ENST00000340648 ZNF575Q86XF7 245 aa10.33□□□□□ -0.76
RRP1B-201ENST00000340648 Q8N9L7 120 aa10.32□□□□□ -0.76
RRP1B-201ENST00000340648 LY6G6DO95868 133 aa10.32□□□□□ -0.76
RRP1B-201ENST00000340648 C1orf137Q5JT78 98 aa10.32□□□□□ -0.76
RRP1B-201ENST00000340648 LINC01561Q8N1V8 128 aa10.32□□□□□ -0.76
RRP1B-201ENST00000340648 TMEM254Q8TBM7 123 aa10.32□□□□□ -0.76
RRP1B-201ENST00000340648 SMR3AQ99954 134 aa10.32□□□□□ -0.76
RRP1B-201ENST00000340648 V9GYY9 64 aa10.31□□□□□ -0.76
RRP1B-201ENST00000340648 CDH23Q9H251 3354 aa10.31□□□□□ -0.76
RRP1B-201ENST00000340648 C1orf195Q5TG92 126 aa10.29□□□□□ -0.76
RRP1B-201ENST00000340648 RETNQ9HD89 108 aa10.29□□□□□ -0.76
RRP1B-201ENST00000340648 NANOS2P60321 138 aaKnown RBP10.29□□□□□ -0.76
RRP1B-201ENST00000340648 C4orf26Q17RF5 130 aa10.28□□□□□ -0.76
RRP1B-201ENST00000340648 PRUNE2Q8WUY3 3088 aa10.27□□□□□ -0.76
RRP1B-201ENST00000340648 SPATA3Q8NHX4 192 aa10.27□□□□□ -0.76
RRP1B-201ENST00000340648 ZFYVE26Q68DK2 2539 aa10.27□□□□□ -0.77
RRP1B-201ENST00000340648 CXCL6P80162 114 aa10.27□□□□□ -0.77
RRP1B-201ENST00000340648 TRBV7-6A0A0J9YX20 115 aa10.27□□□□□ -0.77
RRP1B-201ENST00000340648 OXLD1Q5BKU9 147 aa10.26□□□□□ -0.77
RRP1B-201ENST00000340648 RPS28P62857 69 aaKnown RBP10.26□□□□□ -0.77
RRP1B-201ENST00000340648 ANKRD17O75179 2603 aaKnown RBP10.26□□□□□ -0.77
RRP1B-201ENST00000340648 ZNF462Q96JM2 2506 aa10.26□□□□□ -0.77
RRP1B-201ENST00000340648 Q6ZRU5 148 aa10.26□□□□□ -0.77
RRP1B-201ENST00000340648 C10orf25Q5T742 122 aa10.25□□□□□ -0.77
RRP1B-201ENST00000340648 C16orf95Q9H693 158 aa10.25□□□□□ -0.77
RRP1B-201ENST00000340648 C14orf177Q52M58 125 aa10.24□□□□□ -0.77
RRP1B-201ENST00000340648 Q6ZTC4 211 aa10.24□□□□□ -0.77
RRP1B-201ENST00000340648 XIRP2A4UGR9 3374 aa10.24□□□□□ -0.77
RRP1B-201ENST00000340648 LYPD5Q6UWN5 251 aa10.24□□□□□ -0.77
RRP1B-201ENST00000340648 TRAV10A0A0B4J240 114 aa10.23□□□□□ -0.77
RRP1B-201ENST00000340648 DNAH14Q0VDD8 3507 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms