RNA–Protein interactions for RNA: ENST00000333467.3

APOBEC3B-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene APOBEC3B, Length 1,533 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-201ENST00000333467 IGKV2-29A2NJV5 120 aaPredicted RBP7.74□□□□□ -1.17
APOBEC3B-201ENST00000333467 SMIM9A6NGZ8 99 aa7.74□□□□□ -1.17
APOBEC3B-201ENST00000333467 HERV-K104P63124 156 aa7.74□□□□□ -1.17
APOBEC3B-201ENST00000333467 MTURNQ8N3F0 131 aa7.74□□□□□ -1.17
APOBEC3B-201ENST00000333467 APLNQ9ULZ1 77 aa7.74□□□□□ -1.17
APOBEC3B-201ENST00000333467 DEFB131BA0A096LNP1 70 aa7.73□□□□□ -1.17
APOBEC3B-201ENST00000333467 TRGV1A0A0A0MS02 117 aa7.73□□□□□ -1.17
APOBEC3B-201ENST00000333467 TRAV8-3A0A0A6YYJ7 113 aa7.73□□□□□ -1.17
APOBEC3B-201ENST00000333467 TRBV10-2A0A0K0K1G8 114 aa7.73□□□□□ -1.17
APOBEC3B-201ENST00000333467 H3BT86 120 aa7.73□□□□□ -1.17
APOBEC3B-201ENST00000333467 PRSS2P07478 247 aa7.73□□□□□ -1.17
APOBEC3B-201ENST00000333467 SPINK8P0C7L1 97 aa7.73□□□□□ -1.17
APOBEC3B-201ENST00000333467 SPART-AS1P0CW21 52 aa7.73□□□□□ -1.17
APOBEC3B-201ENST00000333467 RPL13AP40429 203 aaKnown RBP7.73□□□□□ -1.17
APOBEC3B-201ENST00000333467 LINC01620Q4KN68 170 aa7.73□□□□□ -1.17
APOBEC3B-201ENST00000333467 FAM222AQ5U5X8 452 aa7.73□□□□□ -1.17
APOBEC3B-201ENST00000333467 ANKRD29Q8N6D5 301 aa7.73□□□□□ -1.17
APOBEC3B-201ENST00000333467 VPS13DQ5THJ4 4388 aa7.72□□□□□ -1.17
APOBEC3B-201ENST00000333467 TRBV6-4A0A1B0GX49 114 aa7.72□□□□□ -1.17
APOBEC3B-201ENST00000333467 C9JAW5 83 aa7.72□□□□□ -1.17
APOBEC3B-201ENST00000333467 EIF4EBP3O60516 100 aaPredicted RBP7.72□□□□□ -1.17
APOBEC3B-201ENST00000333467 TMEM101Q96IK0 257 aa7.72□□□□□ -1.17
APOBEC3B-201ENST00000333467 CDKN2A-AS1Q9UH64 79 aa7.72□□□□□ -1.17
APOBEC3B-201ENST00000333467 ICOSQ9Y6W8 199 aa7.72□□□□□ -1.17
APOBEC3B-201ENST00000333467 A0A1B0GV72 72 aa7.71□□□□□ -1.18
APOBEC3B-201ENST00000333467 SFTA2Q6UW10 78 aa7.71□□□□□ -1.18
APOBEC3B-201ENST00000333467 KRTAP4-9Q9BYQ8 210 aa7.71□□□□□ -1.18
APOBEC3B-201ENST00000333467 IGHV3-38A0A0C4DH36 116 aa7.7□□□□□ -1.18
APOBEC3B-201ENST00000333467 TRIAP1O43715 76 aa7.7□□□□□ -1.18
APOBEC3B-201ENST00000333467 LINC00242Q5T6M2 205 aa7.7□□□□□ -1.18
APOBEC3B-201ENST00000333467 CARD19Q96LW7 228 aa7.7□□□□□ -1.18
APOBEC3B-201ENST00000333467 TMEM243Q9BU79 118 aa7.7□□□□□ -1.18
APOBEC3B-201ENST00000333467 BIRC6Q9NR09 4857 aa7.69□□□□□ -1.18
APOBEC3B-201ENST00000333467 UBE2L6O14933 153 aa7.69□□□□□ -1.18
APOBEC3B-201ENST00000333467 PRM2P04554 102 aa7.69□□□□□ -1.18
APOBEC3B-201ENST00000333467 C4orf48Q5BLP8 95 aa7.69□□□□□ -1.18
APOBEC3B-201ENST00000333467 RNASE13Q5GAN3 156 aaKnown RBP7.69□□□□□ -1.18
APOBEC3B-201ENST00000333467 ADAMTSL4-AS1Q5T5F5 129 aa7.69□□□□□ -1.18
APOBEC3B-201ENST00000333467 CDIP1Q9H305 208 aa7.69□□□□□ -1.18
APOBEC3B-201ENST00000333467 CDC42SE2Q9NRR3 84 aa7.69□□□□□ -1.18
APOBEC3B-201ENST00000333467 Q9UF83 564 aa7.69□□□□□ -1.18
APOBEC3B-201ENST00000333467 DNAH6Q9C0G6 4158 aa7.69□□□□□ -1.18
APOBEC3B-201ENST00000333467 SMIM1B2RUZ4 78 aa7.68□□□□□ -1.18
APOBEC3B-201ENST00000333467 HTN3P15516 51 aa7.68□□□□□ -1.18
APOBEC3B-201ENST00000333467 Q6ZTI0 123 aa7.68□□□□□ -1.18
APOBEC3B-201ENST00000333467 H7C2G1 150 aa7.68□□□□□ -1.18
APOBEC3B-201ENST00000333467 LST1O00453 97 aa7.68□□□□□ -1.18
APOBEC3B-201ENST00000333467 DAD1P61803 113 aa7.68□□□□□ -1.18
APOBEC3B-201ENST00000333467 LINC00308Q8TCZ7 52 aa7.68□□□□□ -1.18
APOBEC3B-201ENST00000333467 Q9H8V8 135 aa7.68□□□□□ -1.18
APOBEC3B-201ENST00000333467 PLAC8L1A1L4L8 177 aa7.67□□□□□ -1.18
APOBEC3B-201ENST00000333467 MRPL23Q16540 153 aaKnown RBP7.67□□□□□ -1.18
APOBEC3B-201ENST00000333467 NTM-AS1Q6ZSK4 140 aa7.67□□□□□ -1.18
APOBEC3B-201ENST00000333467 ZNF625Q96I27 306 aaPredicted RBP7.67□□□□□ -1.18
APOBEC3B-201ENST00000333467 TRGV2A0A075B6R0 118 aa7.66□□□□□ -1.18
APOBEC3B-201ENST00000333467 FAM240AA0A1B0GVK7 77 aa7.66□□□□□ -1.18
APOBEC3B-201ENST00000333467 LYRM9A8MSI8 78 aa7.66□□□□□ -1.18
APOBEC3B-201ENST00000333467 F5H768 121 aa7.66□□□□□ -1.18
APOBEC3B-201ENST00000333467 COX6A2Q02221 97 aa7.66□□□□□ -1.18
APOBEC3B-201ENST00000333467 UBE2WQ96B02 151 aa7.66□□□□□ -1.18
APOBEC3B-201ENST00000333467 KRTAP4-2Q9BYR5 136 aa7.66□□□□□ -1.18
APOBEC3B-201ENST00000333467 NOP10Q9NPE3 64 aaKnown RBP7.66□□□□□ -1.18
APOBEC3B-201ENST00000333467 GAGE12JA6NER3 117 aa7.65□□□□□ -1.18
APOBEC3B-201ENST00000333467 GAGE4Q13068 117 aa7.65□□□□□ -1.18
APOBEC3B-201ENST00000333467 GAGE5Q13069 117 aa7.65□□□□□ -1.18
APOBEC3B-201ENST00000333467 C2orf82Q6UX34 121 aa7.65□□□□□ -1.18
APOBEC3B-201ENST00000333467 HECTD4Q9Y4D8 3996 aa7.65□□□□□ -1.19
APOBEC3B-201ENST00000333467 LINC00694P0DN24 101 aa7.64□□□□□ -1.19
APOBEC3B-201ENST00000333467 DEFB130BP0DP73 79 aa7.64□□□□□ -1.19
APOBEC3B-201ENST00000333467 DEFB130AP0DP74 79 aa7.64□□□□□ -1.19
APOBEC3B-201ENST00000333467 DNAH10Q8IVF4 4471 aa7.64□□□□□ -1.19
APOBEC3B-201ENST00000333467 TRAV26-1A0A087WT03 109 aa7.63□□□□□ -1.19
APOBEC3B-201ENST00000333467 TRAV13-1A0A0B4J241 112 aa7.63□□□□□ -1.19
APOBEC3B-201ENST00000333467 TRGV4A0A0C4DH28 118 aa7.63□□□□□ -1.19
APOBEC3B-201ENST00000333467 COX7A2LO14548 114 aa7.63□□□□□ -1.19
APOBEC3B-201ENST00000333467 MEIG1Q5JSS6 88 aa7.63□□□□□ -1.19
APOBEC3B-201ENST00000333467 Q6Q795 121 aa7.63□□□□□ -1.19
APOBEC3B-201ENST00000333467 UBE2DNLQ8IWF7 75 aa7.63□□□□□ -1.19
APOBEC3B-201ENST00000333467 NTN5Q8WTR8 489 aaPredicted RBP7.63□□□□□ -1.19
APOBEC3B-201ENST00000333467 TRAV13-2A0A0B4J235 113 aa7.62□□□□□ -1.19
APOBEC3B-201ENST00000333467 TRACP01848 142 aa7.62□□□□□ -1.19
APOBEC3B-201ENST00000333467 LINC01561Q8N1V8 128 aa7.62□□□□□ -1.19
APOBEC3B-201ENST00000333467 TRBV6-8A0A0A6YYG3 113 aa7.62□□□□□ -1.19
APOBEC3B-201ENST00000333467 TRAV8-4A0A0B4J246 113 aa7.62□□□□□ -1.19
APOBEC3B-201ENST00000333467 GAGE7O76087 117 aa7.62□□□□□ -1.19
APOBEC3B-201ENST00000333467 ACYP1P07311 99 aa7.62□□□□□ -1.19
APOBEC3B-201ENST00000333467 GAGE12FP0CL80 117 aa7.62□□□□□ -1.19
APOBEC3B-201ENST00000333467 GAGE12GP0CL81 117 aa7.62□□□□□ -1.19
APOBEC3B-201ENST00000333467 GAGE12IP0CL82 117 aa7.62□□□□□ -1.19
APOBEC3B-201ENST00000333467 XGP55808 180 aa7.62□□□□□ -1.19
APOBEC3B-201ENST00000333467 LINC00612Q8N6U2 182 aa7.62□□□□□ -1.19
APOBEC3B-201ENST00000333467 ATP5G1P05496 136 aa7.61□□□□□ -1.19
APOBEC3B-201ENST00000333467 CKS1BP61024 79 aa7.61□□□□□ -1.19
APOBEC3B-201ENST00000333467 C15orf53Q8NAA6 179 aa7.61□□□□□ -1.19
APOBEC3B-201ENST00000333467 COX7B2Q8TF08 81 aa7.61□□□□□ -1.19
APOBEC3B-201ENST00000333467 M0R2N4 97 aa7.6□□□□□ -1.19
APOBEC3B-201ENST00000333467 SNCGO76070 127 aa7.6□□□□□ -1.19
APOBEC3B-201ENST00000333467 MT-ATP8P03928 68 aa7.6□□□□□ -1.19
APOBEC3B-201ENST00000333467 FHL2Q14192 279 aa7.6□□□□□ -1.19
APOBEC3B-201ENST00000333467 IBA57-AS1B1ANH7 110 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms