RNA–Protein interactions for RNA: ENST00000333467.3

APOBEC3B-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene APOBEC3B, Length 1,533 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-201ENST00000333467 NISCHQ9Y2I1 1504 aa26.86■■□□□ 1.89
APOBEC3B-201ENST00000333467 AEBP2Q6ZN18 517 aaPredicted RBP26.01■■□□□ 1.75
APOBEC3B-201ENST00000333467 CHIC1Q5VXU3 224 aa24.4■■□□□ 1.5
APOBEC3B-201ENST00000333467 CCDC180Q9P1Z9 1646 aa24.13■■□□□ 1.45
APOBEC3B-201ENST00000333467 ABCC9O60706 1549 aa23.69■■□□□ 1.38
APOBEC3B-201ENST00000333467 RB1CC1Q8TDY2 1594 aa22.73■■□□□ 1.23
APOBEC3B-201ENST00000333467 NACADO15069 1562 aa22.63■■□□□ 1.21
APOBEC3B-201ENST00000333467 SENP3Q9H4L4 574 aaPredicted RBP22.43■■□□□ 1.18
APOBEC3B-201ENST00000333467 MYO15BQ96JP2 1530 aa22.39■■□□□ 1.17
APOBEC3B-201ENST00000333467 UNC13AQ9UPW8 1703 aa22.39■■□□□ 1.17
APOBEC3B-201ENST00000333467 DCAF8L2P0C7V8 631 aa22.37■■□□□ 1.17
APOBEC3B-201ENST00000333467 ZCCHC6Q5VYS8 1495 aaKnown RBP22.37■■□□□ 1.17
APOBEC3B-201ENST00000333467 DCAF1Q9Y4B6 1507 aa22.22■■□□□ 1.15
APOBEC3B-201ENST00000333467 BICRAQ9NZM4 1560 aa22.08■■□□□ 1.12
APOBEC3B-201ENST00000333467 PABPN1Q86U42 306 aaKnown RBP eCLIP21.99■■□□□ 1.11
APOBEC3B-201ENST00000333467 PHF23Q9BUL5 403 aaPredicted RBP21.96■■□□□ 1.11
APOBEC3B-201ENST00000333467 SCRIBQ14160 1630 aa21.96■■□□□ 1.11
APOBEC3B-201ENST00000333467 DNAJC5BQ9UF47 199 aa21.84■■□□□ 1.09
APOBEC3B-201ENST00000333467 SHROOM4Q9ULL8 1493 aa21.8■■□□□ 1.08
APOBEC3B-201ENST00000333467 EIF4G1Q04637 1599 aaKnown RBP21.51■■□□□ 1.03
APOBEC3B-201ENST00000333467 POTEDQ86YR6 584 aa21.49■■□□□ 1.03
APOBEC3B-201ENST00000333467 CC2D2AQ9P2K1 1620 aa21.48■■□□□ 1.03
APOBEC3B-201ENST00000333467 CECR2Q9BXF3 1484 aa21.3■■□□□ 1
APOBEC3B-201ENST00000333467 SMARCA4P51532 1647 aa20.97■□□□□ 0.95
APOBEC3B-201ENST00000333467 FOXD1Q16676 465 aa20.96■□□□□ 0.95
APOBEC3B-201ENST00000333467 BAZ1AQ9NRL2 1556 aaPredicted RBP20.87■□□□□ 0.93
APOBEC3B-201ENST00000333467 SMARCA2P51531 1590 aa20.83■□□□□ 0.92
APOBEC3B-201ENST00000333467 ATAD2BQ9ULI0 1458 aa20.81■□□□□ 0.92
APOBEC3B-201ENST00000333467 NCAPD3P42695 1498 aa20.81■□□□□ 0.92
APOBEC3B-201ENST00000333467 HMGXB3Q12766 1538 aa20.8■□□□□ 0.92
APOBEC3B-201ENST00000333467 PEG3Q9GZU2 1588 aa20.74■□□□□ 0.91
APOBEC3B-201ENST00000333467 MROH2BQ7Z745 1585 aa20.71■□□□□ 0.91
APOBEC3B-201ENST00000333467 BAZ1BQ9UIG0 1483 aaKnown RBP20.67■□□□□ 0.9
APOBEC3B-201ENST00000333467 WIZO95785 1651 aa20.54■□□□□ 0.88
APOBEC3B-201ENST00000333467 NESP48681 1621 aa20.45■□□□□ 0.86
APOBEC3B-201ENST00000333467 ERCC6Q03468 1493 aa20.44■□□□□ 0.86
APOBEC3B-201ENST00000333467 LAMC3Q9Y6N6 1575 aa20.4■□□□□ 0.86
APOBEC3B-201ENST00000333467 KIF21AQ7Z4S6 1674 aa20.34■□□□□ 0.85
APOBEC3B-201ENST00000333467 RSF1Q96T23 1441 aaPredicted RBP20.33■□□□□ 0.85
APOBEC3B-201ENST00000333467 CUX2O14529 1486 aa20.31■□□□□ 0.84
APOBEC3B-201ENST00000333467 THOC2Q8NI27 1593 aaKnown RBP20.29■□□□□ 0.84
APOBEC3B-201ENST00000333467 TOP2AP11388 1531 aaKnown RBP20.29■□□□□ 0.84
APOBEC3B-201ENST00000333467 CADPSQ9ULU8 1353 aa20.16■□□□□ 0.82
APOBEC3B-201ENST00000333467 PDS5BQ9NTI5 1447 aa20.16■□□□□ 0.82
APOBEC3B-201ENST00000333467 PRDM2Q13029 1718 aa20.13■□□□□ 0.81
APOBEC3B-201ENST00000333467 MSH5O43196 834 aa20.11■□□□□ 0.81
APOBEC3B-201ENST00000333467 CFTRP13569 1480 aa20.05■□□□□ 0.8
APOBEC3B-201ENST00000333467 MRC2Q9UBG0 1479 aa20.04■□□□□ 0.8
APOBEC3B-201ENST00000333467 WDR62O43379 1518 aa20.03■□□□□ 0.8
APOBEC3B-201ENST00000333467 CEP164Q9UPV0 1460 aa20.03■□□□□ 0.8
APOBEC3B-201ENST00000333467 FANCD2Q9BXW9 1451 aa20■□□□□ 0.79
APOBEC3B-201ENST00000333467 CCDC88BA6NC98 1476 aa19.96■□□□□ 0.79
APOBEC3B-201ENST00000333467 URB2Q14146 1524 aaKnown RBP19.84■□□□□ 0.77
APOBEC3B-201ENST00000333467 DNAJC5Q9H3Z4 198 aa19.82■□□□□ 0.76
APOBEC3B-201ENST00000333467 TOPBP1Q92547 1522 aa19.68■□□□□ 0.74
APOBEC3B-201ENST00000333467 DNMBPQ6XZF7 1577 aa19.68■□□□□ 0.74
APOBEC3B-201ENST00000333467 ABCC8Q09428 1581 aa19.61■□□□□ 0.73
APOBEC3B-201ENST00000333467 IFT140Q96RY7 1462 aa19.58■□□□□ 0.72
APOBEC3B-201ENST00000333467 EIF4G3O43432 1585 aaKnown RBP19.56■□□□□ 0.72
APOBEC3B-201ENST00000333467 SUPT5HO00267 1087 aaKnown RBP19.56■□□□□ 0.72
APOBEC3B-201ENST00000333467 ZNF608Q9ULD9 1512 aaPredicted RBP19.54■□□□□ 0.72
APOBEC3B-201ENST00000333467 TARBP1Q13395 1621 aaKnown RBP19.54■□□□□ 0.72
APOBEC3B-201ENST00000333467 POLA1P09884 1462 aaPredicted RBP19.49■□□□□ 0.71
APOBEC3B-201ENST00000333467 CUX1P39880 1505 aa19.46■□□□□ 0.71
APOBEC3B-201ENST00000333467 FGD5Q6ZNL6 1462 aa19.42■□□□□ 0.7
APOBEC3B-201ENST00000333467 WDR97A6NE52 1622 aa19.42■□□□□ 0.7
APOBEC3B-201ENST00000333467 CHD1O14646 1710 aa19.4■□□□□ 0.7
APOBEC3B-201ENST00000333467 PIAS4Q8N2W9 510 aaPredicted RBP19.39■□□□□ 0.69
APOBEC3B-201ENST00000333467 RAD54L2Q9Y4B4 1467 aa19.38■□□□□ 0.69
APOBEC3B-201ENST00000333467 AQRO60306 1485 aaKnown RBP eCLIP19.35■□□□□ 0.69
APOBEC3B-201ENST00000333467 SOGA1O94964 1423 aa19.32■□□□□ 0.68
APOBEC3B-201ENST00000333467 PBRM1Q86U86 1689 aa19.31■□□□□ 0.68
APOBEC3B-201ENST00000333467 BIVM-ERCC5R4GMW8 1640 aa19.31■□□□□ 0.68
APOBEC3B-201ENST00000333467 OSCARQ8IYS5 282 aa19.28■□□□□ 0.68
APOBEC3B-201ENST00000333467 SYNJ1O43426 1573 aa19.26■□□□□ 0.67
APOBEC3B-201ENST00000333467 TOP2BQ02880 1626 aa19.26■□□□□ 0.67
APOBEC3B-201ENST00000333467 TDRD9Q8NDG6 1382 aaKnown RBP19.25■□□□□ 0.67
APOBEC3B-201ENST00000333467 ABCA5Q8WWZ7 1642 aa19.25■□□□□ 0.67
APOBEC3B-201ENST00000333467 SNAPC4Q5SXM2 1469 aa19.23■□□□□ 0.67
APOBEC3B-201ENST00000333467 RIMBP3CA6NJZ7 1639 aa19.22■□□□□ 0.67
APOBEC3B-201ENST00000333467 RIMBP3BA6NNM3 1639 aa19.22■□□□□ 0.67
APOBEC3B-201ENST00000333467 RIMBP3Q9UFD9 1639 aa19.22■□□□□ 0.67
APOBEC3B-201ENST00000333467 ABCA10Q8WWZ4 1543 aa19.2■□□□□ 0.66
APOBEC3B-201ENST00000333467 WRNQ14191 1432 aaPredicted RBP eCLIP19.19■□□□□ 0.66
APOBEC3B-201ENST00000333467 GRIN2BQ13224 1484 aa19.18■□□□□ 0.66
APOBEC3B-201ENST00000333467 MAGI1Q96QZ7 1491 aaPredicted RBP19.18■□□□□ 0.66
APOBEC3B-201ENST00000333467 GAPVD1Q14C86 1478 aa19.15■□□□□ 0.66
APOBEC3B-201ENST00000333467 ARHGEF11O15085 1522 aa19.15■□□□□ 0.66
APOBEC3B-201ENST00000333467 TRIM41Q8WV44 630 aa19.11■□□□□ 0.65
APOBEC3B-201ENST00000333467 SYNJ2O15056 1496 aa19.1■□□□□ 0.65
APOBEC3B-201ENST00000333467 CLASP1Q7Z460 1538 aa19.09■□□□□ 0.65
APOBEC3B-201ENST00000333467 FBLN2P98095 1184 aa19.09■□□□□ 0.65
APOBEC3B-201ENST00000333467 ADAMTS12P58397 1594 aa19.08■□□□□ 0.64
APOBEC3B-201ENST00000333467 CHMP7Q8WUX9 453 aaPredicted RBP19■□□□□ 0.63
APOBEC3B-201ENST00000333467 ERICH3Q5RHP9 1530 aa18.99■□□□□ 0.63
APOBEC3B-201ENST00000333467 GRIN2AQ12879 1464 aa18.96■□□□□ 0.63
APOBEC3B-201ENST00000333467 ARAP1Q96P48 1450 aa18.96■□□□□ 0.63
APOBEC3B-201ENST00000333467 CEP170Q5SW79 1584 aa18.93■□□□□ 0.62
APOBEC3B-201ENST00000333467 FHAD1B1AJZ9 1412 aa18.9■□□□□ 0.62
APOBEC3B-201ENST00000333467 NUP160Q12769 1436 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms