RNA–Protein interactions for RNA: ENST00000330871.3

SOCS3-201, Transcript of suppressor of cytokine signaling 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOCS3, Length 2,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS3-201ENST00000330871 LINC01356Q8N9X3 169 aa12.74□□□□□ -0.37
SOCS3-201ENST00000330871 MYO9AB2RTY4 2548 aa12.74□□□□□ -0.37
SOCS3-201ENST00000330871 TRBV10-3A0A0K0K1G6 114 aa12.74□□□□□ -0.37
SOCS3-201ENST00000330871 KLKP1Q107X0 134 aa12.74□□□□□ -0.37
SOCS3-201ENST00000330871 TMEM256-PLSCR3K7ERE1 68 aa12.73□□□□□ -0.37
SOCS3-201ENST00000330871 DSCR9P59020 149 aa12.73□□□□□ -0.37
SOCS3-201ENST00000330871 INSP01308 110 aa12.73□□□□□ -0.37
SOCS3-201ENST00000330871 MAP6D1Q9H9H5 199 aa12.73□□□□□ -0.37
SOCS3-201ENST00000330871 LY6G6DO95868 133 aa12.72□□□□□ -0.37
SOCS3-201ENST00000330871 MXRA5Q9NR99 2828 aa12.72□□□□□ -0.37
SOCS3-201ENST00000330871 C18orf65Q6ZTR6 163 aa12.72□□□□□ -0.37
SOCS3-201ENST00000330871 LINC00167Q96N53 147 aa12.71□□□□□ -0.37
SOCS3-201ENST00000330871 IGLV4-60A0A075B6I1 120 aa12.71□□□□□ -0.38
SOCS3-201ENST00000330871 TRBV7-6A0A0J9YX20 115 aa12.71□□□□□ -0.38
SOCS3-201ENST00000330871 LOC100131303A0A0U1RQF7 123 aa12.71□□□□□ -0.38
SOCS3-201ENST00000330871 LINC01547P58512 204 aaPredicted RBP12.7□□□□□ -0.38
SOCS3-201ENST00000330871 NANOS2P60321 138 aaKnown RBP12.7□□□□□ -0.38
SOCS3-201ENST00000330871 F8WDY8 70 aa12.7□□□□□ -0.38
SOCS3-201ENST00000330871 JMJD1CQ15652 2540 aa12.7□□□□□ -0.38
SOCS3-201ENST00000330871 WNK1Q9H4A3 2382 aa12.69□□□□□ -0.38
SOCS3-201ENST00000330871 IGHV3OR16-9A0A0B4J2B5 98 aa12.69□□□□□ -0.38
SOCS3-201ENST00000330871 Q6YL49 198 aa12.68□□□□□ -0.38
SOCS3-201ENST00000330871 C6orf226Q5I0X4 101 aa12.68□□□□□ -0.38
SOCS3-201ENST00000330871 DYNLRB2Q8TF09 96 aa12.68□□□□□ -0.38
SOCS3-201ENST00000330871 FLNCQ14315 2725 aa12.67□□□□□ -0.38
SOCS3-201ENST00000330871 LINC00482Q8N8I6 264 aa12.67□□□□□ -0.38
SOCS3-201ENST00000330871 TM2D3Q9BRN9 247 aa12.67□□□□□ -0.38
SOCS3-201ENST00000330871 TRBV10-1A0A0K0K1A3 114 aa12.66□□□□□ -0.38
SOCS3-201ENST00000330871 KHDC1LQ5JSQ8 128 aa12.66□□□□□ -0.38
SOCS3-201ENST00000330871 Q6ZQT0 140 aa12.66□□□□□ -0.38
SOCS3-201ENST00000330871 USP9XQ93008 2570 aaPredicted RBP12.65□□□□□ -0.38
SOCS3-201ENST00000330871 DEFB114Q30KQ6 69 aa12.65□□□□□ -0.38
SOCS3-201ENST00000330871 Q6ZVQ6 151 aa12.65□□□□□ -0.38
SOCS3-201ENST00000330871 SCXQ7RTU7 201 aa12.65□□□□□ -0.38
SOCS3-201ENST00000330871 MPLKIPQ8TAP9 179 aa12.65□□□□□ -0.38
SOCS3-201ENST00000330871 TLN2Q9Y4G6 2542 aa12.65□□□□□ -0.38
SOCS3-201ENST00000330871 CHD6Q8TD26 2715 aa12.64□□□□□ -0.39
SOCS3-201ENST00000330871 MAPK1IP1LQ8NDC0 245 aa12.64□□□□□ -0.39
SOCS3-201ENST00000330871 LAMTOR3Q9UHA4 124 aa12.64□□□□□ -0.39
SOCS3-201ENST00000330871 NBPF19A0A087WUL8 3843 aa12.63□□□□□ -0.39
SOCS3-201ENST00000330871 A0A087WZ39 114 aa12.63□□□□□ -0.39
SOCS3-201ENST00000330871 FAM229BQ4G0N7 80 aa12.63□□□□□ -0.39
SOCS3-201ENST00000330871 Q8N3U1 123 aa12.63□□□□□ -0.39
SOCS3-201ENST00000330871 NF1P21359 2839 aa12.63□□□□□ -0.39
SOCS3-201ENST00000330871 C6orf99Q4VX62 202 aa12.62□□□□□ -0.39
SOCS3-201ENST00000330871 C1orf195Q5TG92 126 aa12.62□□□□□ -0.39
SOCS3-201ENST00000330871 C1orf158Q8N1D5 194 aa12.62□□□□□ -0.39
SOCS3-201ENST00000330871 PRB1P04280 392 aa12.62□□□□□ -0.39
SOCS3-201ENST00000330871 IL17DQ8TAD2 202 aa12.62□□□□□ -0.39
SOCS3-201ENST00000330871 C4orf3Q8WVX3 66 aa12.62□□□□□ -0.39
SOCS3-201ENST00000330871 ZNF843Q8N446 348 aa12.61□□□□□ -0.39
SOCS3-201ENST00000330871 BCE1O60756 84 aa12.61□□□□□ -0.39
SOCS3-201ENST00000330871 SPATA3Q8NHX4 192 aa12.61□□□□□ -0.39
SOCS3-201ENST00000330871 NOP10Q9NPE3 64 aaKnown RBP12.61□□□□□ -0.39
SOCS3-201ENST00000330871 FSHBP01225 129 aa12.61□□□□□ -0.39
SOCS3-201ENST00000330871 STHQ8IWL8 128 aa12.6□□□□□ -0.39
SOCS3-201ENST00000330871 V9GYY9 64 aa12.59□□□□□ -0.39
SOCS3-201ENST00000330871 PTPN13Q12923 2485 aa12.59□□□□□ -0.39
SOCS3-201ENST00000330871 SEC61GP60059 68 aa12.59□□□□□ -0.39
SOCS3-201ENST00000330871 ODF3L2Q3SX64 289 aa12.59□□□□□ -0.39
SOCS3-201ENST00000330871 SONP18583 2426 aaKnown RBP12.58□□□□□ -0.4
SOCS3-201ENST00000330871 MIFP14174 115 aa12.58□□□□□ -0.4
SOCS3-201ENST00000330871 CACNA1AO00555 2505 aa12.58□□□□□ -0.4
SOCS3-201ENST00000330871 EPG5Q9HCE0 2579 aa12.58□□□□□ -0.4
SOCS3-201ENST00000330871 TRBV7-4A0A0J9YYF1 115 aa12.57□□□□□ -0.4
SOCS3-201ENST00000330871 CLPSL2Q6UWE3 100 aa12.57□□□□□ -0.4
SOCS3-201ENST00000330871 ACACBO00763 2458 aa12.56□□□□□ -0.4
SOCS3-201ENST00000330871 TRGV2A0A075B6R0 118 aa12.55□□□□□ -0.4
SOCS3-201ENST00000330871 DOPEY1Q5JWR5 2465 aa12.55□□□□□ -0.4
SOCS3-201ENST00000330871 LINC00959A0A1B0GUT2 108 aa12.55□□□□□ -0.4
SOCS3-201ENST00000330871 Q8NDZ9 215 aa12.55□□□□□ -0.4
SOCS3-201ENST00000330871 C9orf116Q5BN46 136 aaPredicted RBP12.54□□□□□ -0.4
SOCS3-201ENST00000330871 LINC00575Q6W349 94 aa12.54□□□□□ -0.4
SOCS3-201ENST00000330871 LOC110117498A0A087WWA1 95 aa12.53□□□□□ -0.4
SOCS3-201ENST00000330871 ZNF561-AS1K7EIQ3 104 aa12.53□□□□□ -0.4
SOCS3-201ENST00000330871 PLA2G2AP14555 144 aa12.53□□□□□ -0.4
SOCS3-201ENST00000330871 TRBV6-8A0A0A6YYG3 113 aa12.53□□□□□ -0.4
SOCS3-201ENST00000330871 NDUFC1O43677 76 aa12.53□□□□□ -0.4
SOCS3-201ENST00000330871 IGHV4-31P0DP07 118 aa12.52□□□□□ -0.41
SOCS3-201ENST00000330871 NREPQ16612 68 aa12.52□□□□□ -0.41
SOCS3-201ENST00000330871 TMEM254Q8TBM7 123 aa12.52□□□□□ -0.41
SOCS3-201ENST00000330871 CFAP46Q8IYW2 2715 aa12.52□□□□□ -0.41
SOCS3-201ENST00000330871 NBEAL2Q6ZNJ1 2754 aa12.51□□□□□ -0.41
SOCS3-201ENST00000330871 C6orf223Q8N319 242 aa12.51□□□□□ -0.41
SOCS3-201ENST00000330871 ZFYVE26Q68DK2 2539 aa12.51□□□□□ -0.41
SOCS3-201ENST00000330871 CXCL6P80162 114 aa12.51□□□□□ -0.41
SOCS3-201ENST00000330871 TRGV4A0A0C4DH28 118 aa12.5□□□□□ -0.41
SOCS3-201ENST00000330871 Q6ZQY7 126 aa12.49□□□□□ -0.41
SOCS3-201ENST00000330871 Q8N9L7 120 aa12.48□□□□□ -0.41
SOCS3-201ENST00000330871 PKD1L2Q7Z442 2459 aa12.48□□□□□ -0.41
SOCS3-201ENST00000330871 Q8IZM0 81 aa12.48□□□□□ -0.41
SOCS3-201ENST00000330871 ATP5EP56381 51 aaPredicted RBP12.47□□□□□ -0.41
SOCS3-201ENST00000330871 TEX15Q9BXT5 2789 aa12.47□□□□□ -0.41
SOCS3-201ENST00000330871 ANKRD17O75179 2603 aaKnown RBP12.47□□□□□ -0.41
SOCS3-201ENST00000330871 BPY2O14599 106 aa12.47□□□□□ -0.41
SOCS3-201ENST00000330871 FN1P02751 2386 aaKnown RBP12.47□□□□□ -0.41
SOCS3-201ENST00000330871 NAV2Q8IVL1 2488 aa12.46□□□□□ -0.41
SOCS3-201ENST00000330871 MUC7Q8TAX7 377 aa12.46□□□□□ -0.41
SOCS3-201ENST00000330871 MYO18BQ8IUG5 2567 aa12.46□□□□□ -0.41
SOCS3-201ENST00000330871 LINC00269Q8N2A0 174 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms