RNA–Protein interactions for RNA: ENST00000323853.9

SNRNP200-201, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP200, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-201ENST00000323853 LINC01547P58512 204 aaPredicted RBP7.62□□□□□ -1.19
SNRNP200-201ENST00000323853 CIRBP-AS1Q8TBR5 109 aa7.62□□□□□ -1.19
SNRNP200-201ENST00000323853 ZFHX2Q9C0A1 2572 aaPredicted RBP7.62□□□□□ -1.19
SNRNP200-201ENST00000323853 PRR14LQ5THK1 2151 aa7.61□□□□□ -1.19
SNRNP200-201ENST00000323853 COL27A1Q8IZC6 1860 aaPredicted RBP7.6□□□□□ -1.19
SNRNP200-201ENST00000323853 IGLV5-45A0A087WSX0 123 aa7.6□□□□□ -1.19
SNRNP200-201ENST00000323853 CXCL6P80162 114 aa7.6□□□□□ -1.19
SNRNP200-201ENST00000323853 LINC01556Q5JQF7 62 aa7.6□□□□□ -1.19
SNRNP200-201ENST00000323853 RIF1Q5UIP0 2472 aaKnown RBP7.6□□□□□ -1.19
SNRNP200-201ENST00000323853 PTPRBP23467 1997 aa7.59□□□□□ -1.19
SNRNP200-201ENST00000323853 SMCPP49901 116 aaPredicted RBP7.59□□□□□ -1.19
SNRNP200-201ENST00000323853 HCG22E2RYF7 251 aa7.59□□□□□ -1.19
SNRNP200-201ENST00000323853 SOSTDC1Q6X4U4 206 aa7.59□□□□□ -1.19
SNRNP200-201ENST00000323853 A0A087WSZ3 146 aa7.58□□□□□ -1.2
SNRNP200-201ENST00000323853 IGHV3OR16-9A0A0B4J2B5 98 aa7.58□□□□□ -1.2
SNRNP200-201ENST00000323853 H0Y9P7 68 aa7.58□□□□□ -1.2
SNRNP200-201ENST00000323853 C1orf195Q5TG92 126 aa7.58□□□□□ -1.2
SNRNP200-201ENST00000323853 C22orf24Q9Y442 160 aa7.58□□□□□ -1.2
SNRNP200-201ENST00000323853 TET2Q6N021 2002 aaPredicted RBP7.58□□□□□ -1.2
SNRNP200-201ENST00000323853 DEFB116Q30KQ4 102 aa7.58□□□□□ -1.2
SNRNP200-201ENST00000323853 TNCP24821 2201 aa7.58□□□□□ -1.2
SNRNP200-201ENST00000323853 FHL3Q13643 280 aa7.57□□□□□ -1.2
SNRNP200-201ENST00000323853 PRO0461Q9UI25 63 aa7.56□□□□□ -1.2
SNRNP200-201ENST00000323853 EP400Q96L91 3159 aa7.56□□□□□ -1.2
SNRNP200-201ENST00000323853 TMEM254Q8TBM7 123 aa7.55□□□□□ -1.2
SNRNP200-201ENST00000323853 FAM218AQ96MZ4 157 aa7.55□□□□□ -1.2
SNRNP200-201ENST00000323853 RETNLBQ9BQ08 111 aa7.55□□□□□ -1.2
SNRNP200-201ENST00000323853 PCSK5Q92824 1860 aa7.55□□□□□ -1.2
SNRNP200-201ENST00000323853 ARHGAP32A7KAX9 2087 aa7.55□□□□□ -1.2
SNRNP200-201ENST00000323853 PRLHP81277 87 aa7.55□□□□□ -1.2
SNRNP200-201ENST00000323853 SPATA3Q8NHX4 192 aa7.55□□□□□ -1.2
SNRNP200-201ENST00000323853 KIAA0087Q14695 138 aa7.55□□□□□ -1.2
SNRNP200-201ENST00000323853 C6orf48Q9UBA6 75 aa7.55□□□□□ -1.2
SNRNP200-201ENST00000323853 KLK9Q2XQG4 91 aa7.55□□□□□ -1.2
SNRNP200-201ENST00000323853 PCOTHQ58A44 107 aa7.55□□□□□ -1.2
SNRNP200-201ENST00000323853 SMCR5Q8TEV8 140 aa7.55□□□□□ -1.2
SNRNP200-201ENST00000323853 PLXNB1O43157 2135 aa7.54□□□□□ -1.2
SNRNP200-201ENST00000323853 C1orf134Q5TEV5 83 aa7.54□□□□□ -1.2
SNRNP200-201ENST00000323853 TRBV7-6A0A0J9YX20 115 aa7.54□□□□□ -1.2
SNRNP200-201ENST00000323853 X6R8D5 127 aa7.53□□□□□ -1.2
SNRNP200-201ENST00000323853 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.52□□□□□ -1.218e-7■■■□□ 18.9
SNRNP200-201ENST00000323853 SBSPONQ8IVN8 264 aa7.52□□□□□ -1.21
SNRNP200-201ENST00000323853 ELOF1P60002 83 aaKnown RBP7.52□□□□□ -1.21
SNRNP200-201ENST00000323853 SMIM29Q86T20 159 aa7.52□□□□□ -1.21
SNRNP200-201ENST00000323853 PLCE1Q9P212 2302 aa7.52□□□□□ -1.21
SNRNP200-201ENST00000323853 Q9UF83 564 aa7.51□□□□□ -1.21
SNRNP200-201ENST00000323853 CACNA1GO43497 2377 aa7.51□□□□□ -1.21
SNRNP200-201ENST00000323853 SPTAN1Q13813 2472 aaKnown RBP7.51□□□□□ -1.21
SNRNP200-201ENST00000323853 H3BNG1 76 aa7.51□□□□□ -1.21
SNRNP200-201ENST00000323853 hDV103S1A0JD37 113 aa7.5□□□□□ -1.21
SNRNP200-201ENST00000323853 CACNA1HO95180 2353 aa7.5□□□□□ -1.21
SNRNP200-201ENST00000323853 LINC00167Q96N53 147 aa7.49□□□□□ -1.21
SNRNP200-201ENST00000323853 PSPHP1O15172 72 aa7.49□□□□□ -1.21
SNRNP200-201ENST00000323853 ANKHD1Q8IWZ3 2542 aaKnown RBP7.49□□□□□ -1.21
SNRNP200-201ENST00000323853 MED13LQ71F56 2210 aa7.49□□□□□ -1.21
SNRNP200-201ENST00000323853 LOC110117498A0A087WWA1 95 aa7.48□□□□□ -1.21
SNRNP200-201ENST00000323853 Q6ZQT0 140 aa7.48□□□□□ -1.21
SNRNP200-201ENST00000323853 NHLRC4P0CG21 123 aaPredicted RBP7.48□□□□□ -1.21
SNRNP200-201ENST00000323853 LITAFQ99732 161 aa7.47□□□□□ -1.21
SNRNP200-201ENST00000323853 BCE1O60756 84 aa7.47□□□□□ -1.21
SNRNP200-201ENST00000323853 CRYGAP11844 174 aa7.47□□□□□ -1.21
SNRNP200-201ENST00000323853 LIMD2Q9BT23 127 aa7.47□□□□□ -1.21
SNRNP200-201ENST00000323853 C1orf64Q8NEQ6 169 aa7.47□□□□□ -1.21
SNRNP200-201ENST00000323853 MUC6Q6W4X9 2439 aa7.46□□□□□ -1.22
SNRNP200-201ENST00000323853 NAV3Q8IVL0 2385 aa7.46□□□□□ -1.22
SNRNP200-201ENST00000323853 PMAIP1Q13794 54 aa7.45□□□□□ -1.22
SNRNP200-201ENST00000323853 MDFIQ99750 246 aa7.45□□□□□ -1.22
SNRNP200-201ENST00000323853 HIVEP2P31629 2446 aa7.45□□□□□ -1.22
SNRNP200-201ENST00000323853 FSHBP01225 129 aa7.45□□□□□ -1.22
SNRNP200-201ENST00000323853 NBASA2RRP1 2371 aa7.45□□□□□ -1.22
SNRNP200-201ENST00000323853 A0A1B0GW54 56 aa7.44□□□□□ -1.22
SNRNP200-201ENST00000323853 Q8NAQ8 132 aa7.43□□□□□ -1.22
SNRNP200-201ENST00000323853 Q6ZRX8 168 aa7.43□□□□□ -1.22
SNRNP200-201ENST00000323853 AGRNO00468 2067 aa7.41□□□□□ -1.22
SNRNP200-201ENST00000323853 SPINK1P00995 79 aa7.41□□□□□ -1.22
SNRNP200-201ENST00000323853 GVQW2A0A096LPI5 108 aaPredicted RBP7.41□□□□□ -1.22
SNRNP200-201ENST00000323853 PHF5AQ7RTV0 110 aaKnown RBP7.4□□□□□ -1.22
SNRNP200-201ENST00000323853 TP53AIP1Q9HCN2 124 aa7.4□□□□□ -1.22
SNRNP200-201ENST00000323853 LINC00476Q8WZB0 136 aa7.4□□□□□ -1.22
SNRNP200-201ENST00000323853 MOBPQ13875 183 aa7.4□□□□□ -1.23
SNRNP200-201ENST00000323853 OTOGLQ3ZCN5 2332 aa7.4□□□□□ -1.23
SNRNP200-201ENST00000323853 ST20-AS1Q8NBB2 130 aa7.39□□□□□ -1.23
SNRNP200-201ENST00000323853 C16orf90A8MZG2 172 aa7.38□□□□□ -1.23
SNRNP200-201ENST00000323853 Q8NBF4 154 aa7.38□□□□□ -1.23
SNRNP200-201ENST00000323853 LINC00588Q9Y4M8 146 aa7.38□□□□□ -1.23
SNRNP200-201ENST00000323853 IGLV6-57P01721 117 aa7.38□□□□□ -1.23
SNRNP200-201ENST00000323853 C7orf65Q6ZTY9 151 aa7.38□□□□□ -1.23
SNRNP200-201ENST00000323853 EPM2AB3EWF7 344 aa7.37□□□□□ -1.23
SNRNP200-201ENST00000323853 KRTAP24-1Q3LI83 254 aa7.36□□□□□ -1.23
SNRNP200-201ENST00000323853 DOPEY2Q9Y3R5 2298 aa7.36□□□□□ -1.23
SNRNP200-201ENST00000323853 Q6ZRP5 223 aa7.36□□□□□ -1.23
SNRNP200-201ENST00000323853 CSNK1G2-AS1Q8NCQ2 148 aa7.36□□□□□ -1.23
SNRNP200-201ENST00000323853 SRCAPQ6ZRS2 3230 aa7.36□□□□□ -1.23
SNRNP200-201ENST00000323853 RPS28P62857 69 aaKnown RBP7.36□□□□□ -1.23
SNRNP200-201ENST00000323853 NOTCH3Q9UM47 2321 aa7.35□□□□□ -1.23
SNRNP200-201ENST00000323853 RTL8CO15255 209 aa7.35□□□□□ -1.23
SNRNP200-201ENST00000323853 H3BPC8 53 aa7.35□□□□□ -1.23
SNRNP200-201ENST00000323853 IGKV2D-30A0A075B6S6 120 aa7.35□□□□□ -1.23
SNRNP200-201ENST00000323853 IGKV2-30P06310 120 aa7.35□□□□□ -1.23
SNRNP200-201ENST00000323853 PTPRQQ9UMZ3 2332 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 125.7 ms