RNA–Protein interactions for RNA: ENST00000320580.8

PACS1-201, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PACS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-201ENST00000320580 GYPEP15421 78 aa11.9□□□□□ -0.5
PACS1-201ENST00000320580 MAP6D1Q9H9H5 199 aa11.89□□□□□ -0.51
PACS1-201ENST00000320580 RETNQ9HD89 108 aa11.89□□□□□ -0.51
PACS1-201ENST00000320580 DOPEY1Q5JWR5 2465 aa11.89□□□□□ -0.51
PACS1-201ENST00000320580 LINC00269Q8N2A0 174 aa11.88□□□□□ -0.51
PACS1-201ENST00000320580 LINC01600Q96MT4 127 aa11.88□□□□□ -0.51
PACS1-201ENST00000320580 LINC01547P58512 204 aaPredicted RBP11.88□□□□□ -0.51
PACS1-201ENST00000320580 TMEM254Q8TBM7 123 aa11.88□□□□□ -0.51
PACS1-201ENST00000320580 H3BQ85 93 aa11.88□□□□□ -0.51
PACS1-201ENST00000320580 FBXL19-AS1Q494R0 122 aa11.88□□□□□ -0.51
PACS1-201ENST00000320580 Q6ZVQ6 151 aa11.88□□□□□ -0.51
PACS1-201ENST00000320580 CYSTM1Q9H1C7 97 aa11.87□□□□□ -0.51
PACS1-201ENST00000320580 TRBV10-3A0A0K0K1G6 114 aa11.86□□□□□ -0.51
PACS1-201ENST00000320580 LOC100131303A0A0U1RQF7 123 aa11.86□□□□□ -0.51
PACS1-201ENST00000320580 LINC00474Q9P2X8 69 aa11.86□□□□□ -0.51
PACS1-201ENST00000320580 CMC4P56277 68 aaPredicted RBP11.86□□□□□ -0.51
PACS1-201ENST00000320580 COX7BP24311 80 aa11.85□□□□□ -0.51
PACS1-201ENST00000320580 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.85□□□□□ -0.51
PACS1-201ENST00000320580 SPAG11BQ08648 103 aa11.85□□□□□ -0.51
PACS1-201ENST00000320580 ZNF843Q8N446 348 aa11.85□□□□□ -0.51
PACS1-201ENST00000320580 PSPHP1O15172 72 aa11.84□□□□□ -0.51
PACS1-201ENST00000320580 PRYO14603 147 aa11.84□□□□□ -0.51
PACS1-201ENST00000320580 CELA1Q9UNI1 258 aa11.84□□□□□ -0.51
PACS1-201ENST00000320580 C3orf84H3BNL1 204 aa11.84□□□□□ -0.51
PACS1-201ENST00000320580 PMAIP1Q13794 54 aa11.83□□□□□ -0.51
PACS1-201ENST00000320580 MTORP42345 2549 aa11.83□□□□□ -0.51
PACS1-201ENST00000320580 ESRGQ1W209 222 aa11.83□□□□□ -0.52
PACS1-201ENST00000320580 IGLV5-45A0A087WSX0 123 aa11.83□□□□□ -0.52
PACS1-201ENST00000320580 TRAV10A0A0B4J240 114 aa11.83□□□□□ -0.52
PACS1-201ENST00000320580 C16orf74Q96GX8 76 aa11.83□□□□□ -0.52
PACS1-201ENST00000320580 FLNBO75369 2602 aaKnown RBP11.83□□□□□ -0.52
PACS1-201ENST00000320580 JMJD1CQ15652 2540 aa11.82□□□□□ -0.52
PACS1-201ENST00000320580 TRBV6-8A0A0A6YYG3 113 aa11.82□□□□□ -0.52
PACS1-201ENST00000320580 TMEM89A2RUT3 159 aa11.82□□□□□ -0.52
PACS1-201ENST00000320580 C9orf129Q5T035 196 aaKnown RBP11.82□□□□□ -0.52
PACS1-201ENST00000320580 ESM1Q9NQ30 184 aa11.82□□□□□ -0.52
PACS1-201ENST00000320580 ACANP16112 2415 aa11.82□□□□□ -0.52
PACS1-201ENST00000320580 MP68P56378 58 aa11.81□□□□□ -0.52
PACS1-201ENST00000320580 ASPMQ8IZT6 3477 aa11.81□□□□□ -0.52
PACS1-201ENST00000320580 A0A087WZ39 114 aa11.81□□□□□ -0.52
PACS1-201ENST00000320580 NKAPP1Q8N9T2 125 aa11.81□□□□□ -0.52
PACS1-201ENST00000320580 ATMQ13315 3056 aa11.81□□□□□ -0.52
PACS1-201ENST00000320580 WDFY3Q8IZQ1 3526 aa11.81□□□□□ -0.52
PACS1-201ENST00000320580 COL27A1Q8IZC6 1860 aaPredicted RBP11.81□□□□□ -0.52
PACS1-201ENST00000320580 HIVEP2P31629 2446 aa11.8□□□□□ -0.52
PACS1-201ENST00000320580 F8WDY8 70 aa11.8□□□□□ -0.52
PACS1-201ENST00000320580 IGKV2-28A0A075B6P5 120 aa11.8□□□□□ -0.52
PACS1-201ENST00000320580 IGKV2D-28P01615 120 aa11.8□□□□□ -0.52
PACS1-201ENST00000320580 LINC00959A0A1B0GUT2 108 aa11.8□□□□□ -0.52
PACS1-201ENST00000320580 A8MTW9 85 aa11.8□□□□□ -0.52
PACS1-201ENST00000320580 XAGE1AQ9HD64 81 aa11.79□□□□□ -0.52
PACS1-201ENST00000320580 FAM30AQ9NZY2 134 aa11.79□□□□□ -0.52
PACS1-201ENST00000320580 J3QKU1 62 aa11.79□□□□□ -0.52
PACS1-201ENST00000320580 IGLV4-60A0A075B6I1 120 aa11.79□□□□□ -0.52
PACS1-201ENST00000320580 IGLV1-40P01703 118 aa11.79□□□□□ -0.52
PACS1-201ENST00000320580 NANOS2P60321 138 aaKnown RBP11.79□□□□□ -0.52
PACS1-201ENST00000320580 Q5XG85 94 aa11.79□□□□□ -0.52
PACS1-201ENST00000320580 LINC01356Q8N9X3 169 aa11.79□□□□□ -0.52
PACS1-201ENST00000320580 IGHV4-30-2A0A087WSY4 118 aa11.78□□□□□ -0.52
PACS1-201ENST00000320580 BBC3Q96PG8 261 aaPredicted RBP11.78□□□□□ -0.52
PACS1-201ENST00000320580 ADGRG4Q8IZF6 3080 aa11.78□□□□□ -0.52
PACS1-201ENST00000320580 C11orf71Q6IPW1 123 aa11.77□□□□□ -0.52
PACS1-201ENST00000320580 CFAP47Q6ZTR5 3102 aa11.77□□□□□ -0.53
PACS1-201ENST00000320580 C9orf116Q5BN46 136 aaPredicted RBP11.77□□□□□ -0.53
PACS1-201ENST00000320580 TM2D3Q9BRN9 247 aa11.77□□□□□ -0.53
PACS1-201ENST00000320580 HECTD1Q9ULT8 2610 aa11.77□□□□□ -0.53
PACS1-201ENST00000320580 H7BZZ5 65 aa11.77□□□□□ -0.53
PACS1-201ENST00000320580 Q8N9L7 120 aa11.77□□□□□ -0.53
PACS1-201ENST00000320580 USP24Q9UPU5 2620 aa11.76□□□□□ -0.53
PACS1-201ENST00000320580 CHCHD10Q8WYQ3 142 aaPredicted RBP11.76□□□□□ -0.53
PACS1-201ENST00000320580 A0A1W2PPR1 153 aa11.76□□□□□ -0.53
PACS1-201ENST00000320580 ZZEF1O43149 2961 aa11.75□□□□□ -0.53
PACS1-201ENST00000320580 CAMK2N2Q96S95 79 aa11.75□□□□□ -0.53
PACS1-201ENST00000320580 ANKRD17O75179 2603 aaKnown RBP11.75□□□□□ -0.53
PACS1-201ENST00000320580 LAMA5O15230 3695 aa11.75□□□□□ -0.53
PACS1-201ENST00000320580 CHKB-CPT1BH3BT56 60 aa11.74□□□□□ -0.53
PACS1-201ENST00000320580 BCE1O60756 84 aa11.74□□□□□ -0.53
PACS1-201ENST00000320580 C11orf72Q8NBR9 251 aa11.74□□□□□ -0.53
PACS1-201ENST00000320580 Q96MF0 132 aa11.74□□□□□ -0.53
PACS1-201ENST00000320580 OXTP01178 125 aa11.73□□□□□ -0.53
PACS1-201ENST00000320580 C1orf158Q8N1D5 194 aa11.73□□□□□ -0.53
PACS1-201ENST00000320580 Q8IZM0 81 aa11.72□□□□□ -0.53
PACS1-201ENST00000320580 BEAN1Q3B7T3 259 aa11.72□□□□□ -0.53
PACS1-201ENST00000320580 DEFB114Q30KQ6 69 aa11.71□□□□□ -0.53
PACS1-201ENST00000320580 MUC7Q8TAX7 377 aa11.71□□□□□ -0.53
PACS1-201ENST00000320580 CXCL6P80162 114 aa11.71□□□□□ -0.54
PACS1-201ENST00000320580 REG3AQ06141 175 aa11.71□□□□□ -0.54
PACS1-201ENST00000320580 LINC00575Q6W349 94 aa11.71□□□□□ -0.54
PACS1-201ENST00000320580 IGSF10Q6WRI0 2623 aa11.71□□□□□ -0.54
PACS1-201ENST00000320580 KLK12Q9UKR0 248 aa11.7□□□□□ -0.54
PACS1-201ENST00000320580 HIGD2AQ9BW72 106 aa11.7□□□□□ -0.54
PACS1-201ENST00000320580 CCL24O00175 119 aa11.7□□□□□ -0.54
PACS1-201ENST00000320580 DSCR9P59020 149 aa11.7□□□□□ -0.54
PACS1-201ENST00000320580 KLKP1Q107X0 134 aa11.69□□□□□ -0.54
PACS1-201ENST00000320580 C18orf65Q6ZTR6 163 aa11.68□□□□□ -0.54
PACS1-201ENST00000320580 DCHS1Q96JQ0 3298 aa11.68□□□□□ -0.54
PACS1-201ENST00000320580 A6NED7 52 aa11.67□□□□□ -0.54
PACS1-201ENST00000320580 Q6ZQT0 140 aa11.67□□□□□ -0.54
PACS1-201ENST00000320580 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.67□□□□□ -0.54
PACS1-201ENST00000320580 IGHV3OR16-9A0A0B4J2B5 98 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms