RNA–Protein interactions for RNA: ENST00000316509.10

VAMP2-201, Transcript of vesicle associated membrane protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP2, Length 2,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP2-201ENST00000316509 TEN1Q86WV5 123 aa9.54□□□□□ -0.88
VAMP2-201ENST00000316509 COX17Q14061 63 aa9.54□□□□□ -0.88
VAMP2-201ENST00000316509 PRR34Q9NV39 138 aa9.54□□□□□ -0.88
VAMP2-201ENST00000316509 SLC25A20O43772 301 aa9.53□□□□□ -0.88
VAMP2-201ENST00000316509 TRBV10-2A0A0K0K1G8 114 aa9.53□□□□□ -0.88
VAMP2-201ENST00000316509 MUC7Q8TAX7 377 aa9.53□□□□□ -0.88
VAMP2-201ENST00000316509 KLK5Q9Y337 293 aaPredicted RBP9.53□□□□□ -0.88
VAMP2-201ENST00000316509 TRAV8-4A0A0B4J246 113 aa9.52□□□□□ -0.89
VAMP2-201ENST00000316509 C9JAW5 83 aa9.52□□□□□ -0.89
VAMP2-201ENST00000316509 MALP21145 153 aa9.52□□□□□ -0.89
VAMP2-201ENST00000316509 CKS1BP61024 79 aa9.52□□□□□ -0.89
VAMP2-201ENST00000316509 FOXI1Q12951 378 aa9.52□□□□□ -0.89
VAMP2-201ENST00000316509 CFAP161Q6P656 301 aa9.52□□□□□ -0.89
VAMP2-201ENST00000316509 PPDPFLQ8WWR9 84 aa9.52□□□□□ -0.89
VAMP2-201ENST00000316509 SND1-IT1Q9HBX3 110 aa9.52□□□□□ -0.89
VAMP2-201ENST00000316509 LST1O00453 97 aa9.51□□□□□ -0.89
VAMP2-201ENST00000316509 MTURNQ8N3F0 131 aa9.51□□□□□ -0.89
VAMP2-201ENST00000316509 KIAA0087Q14695 138 aa9.51□□□□□ -0.89
VAMP2-201ENST00000316509 KPRPQ5T749 579 aaPredicted RBP9.51□□□□□ -0.89
VAMP2-201ENST00000316509 CLPSL2Q6UWE3 100 aa9.51□□□□□ -0.89
VAMP2-201ENST00000316509 ANKRD29Q8N6D5 301 aa9.51□□□□□ -0.89
VAMP2-201ENST00000316509 RETNQ9HD89 108 aa9.5□□□□□ -0.89
VAMP2-201ENST00000316509 ATRQ13535 2644 aa9.5□□□□□ -0.89
VAMP2-201ENST00000316509 H3BT86 120 aa9.5□□□□□ -0.89
VAMP2-201ENST00000316509 CRPP02741 224 aa9.5□□□□□ -0.89
VAMP2-201ENST00000316509 RPL28P46779 137 aaKnown RBP9.49□□□□□ -0.89
VAMP2-201ENST00000316509 CCL18P55774 89 aa9.49□□□□□ -0.89
VAMP2-201ENST00000316509 PFN2P35080 140 aa9.48□□□□□ -0.89
VAMP2-201ENST00000316509 Q6ZTC4 211 aa9.48□□□□□ -0.89
VAMP2-201ENST00000316509 C11orf45Q8TAV5 145 aa9.48□□□□□ -0.89
VAMP2-201ENST00000316509 GAGE12HA6NDE8 117 aa9.47□□□□□ -0.89
VAMP2-201ENST00000316509 KLK12Q9UKR0 248 aa9.47□□□□□ -0.89
VAMP2-201ENST00000316509 CARD19Q96LW7 228 aa9.47□□□□□ -0.89
VAMP2-201ENST00000316509 SPATA25Q9BR10 227 aa9.47□□□□□ -0.89
VAMP2-201ENST00000316509 A0A0J9YWU9 116 aa9.46□□□□□ -0.89
VAMP2-201ENST00000316509 ENHOQ6UWT2 76 aa9.46□□□□□ -0.89
VAMP2-201ENST00000316509 IGLV10-54A0A075B6I4 117 aa9.46□□□□□ -0.9
VAMP2-201ENST00000316509 IGKV2-28A0A075B6P5 120 aa9.46□□□□□ -0.9
VAMP2-201ENST00000316509 NDUFC2O95298 119 aa9.46□□□□□ -0.9
VAMP2-201ENST00000316509 IGKV2D-28P01615 120 aa9.46□□□□□ -0.9
VAMP2-201ENST00000316509 TRACP01848 142 aa9.46□□□□□ -0.9
VAMP2-201ENST00000316509 TENM1Q9UKZ4 2725 aa9.45□□□□□ -0.9
VAMP2-201ENST00000316509 VWFP04275 2813 aa9.45□□□□□ -0.9
VAMP2-201ENST00000316509 DEFB131BA0A096LNP1 70 aa9.45□□□□□ -0.9
VAMP2-201ENST00000316509 C2orf82Q6UX34 121 aa9.45□□□□□ -0.9
VAMP2-201ENST00000316509 Q8N3U1 123 aa9.45□□□□□ -0.9
VAMP2-201ENST00000316509 H0YGX0 51 aa9.44□□□□□ -0.9
VAMP2-201ENST00000316509 CLEC2BQ92478 149 aa9.44□□□□□ -0.9
VAMP2-201ENST00000316509 LINC00337Q8N6G1 96 aa9.44□□□□□ -0.9
VAMP2-201ENST00000316509 GVQW2A0A096LPI5 108 aaPredicted RBP9.43□□□□□ -0.9
VAMP2-201ENST00000316509 SPAG11BQ08648 103 aa9.43□□□□□ -0.9
VAMP2-201ENST00000316509 TM2D3Q9BRN9 247 aa9.43□□□□□ -0.9
VAMP2-201ENST00000316509 FBN1P35555 2871 aaKnown RBP9.42□□□□□ -0.9
VAMP2-201ENST00000316509 NANOS2P60321 138 aaKnown RBP9.42□□□□□ -0.9
VAMP2-201ENST00000316509 TRAV10A0A0B4J240 114 aa9.41□□□□□ -0.9
VAMP2-201ENST00000316509 ESRGQ1W209 222 aa9.41□□□□□ -0.9
VAMP2-201ENST00000316509 C15orf53Q8NAA6 179 aa9.41□□□□□ -0.9
VAMP2-201ENST00000316509 UBE2WQ96B02 151 aa9.41□□□□□ -0.9
VAMP2-201ENST00000316509 LINC01556Q5JQF7 62 aa9.41□□□□□ -0.9
VAMP2-201ENST00000316509 SIGMAR1Q99720 223 aa9.41□□□□□ -0.9
VAMP2-201ENST00000316509 F8WDY8 70 aa9.4□□□□□ -0.9
VAMP2-201ENST00000316509 WFDC10BQ8IUB3 73 aa9.4□□□□□ -0.9
VAMP2-201ENST00000316509 SMIM11BQ8TCY0 68 aa9.4□□□□□ -0.91
VAMP2-201ENST00000316509 NTN5Q8WTR8 489 aaPredicted RBP9.4□□□□□ -0.91
VAMP2-201ENST00000316509 DEFB121Q5J5C9 76 aa9.39□□□□□ -0.91
VAMP2-201ENST00000316509 SCGB1A1P11684 91 aa9.38□□□□□ -0.91
VAMP2-201ENST00000316509 OR13C6PQ8NH95 151 aa9.37□□□□□ -0.91
VAMP2-201ENST00000316509 TMEM126AQ9H061 195 aa9.37□□□□□ -0.91
VAMP2-201ENST00000316509 K7EIL1 84 aa9.37□□□□□ -0.91
VAMP2-201ENST00000316509 KRTAP26-1Q6PEX3 210 aa9.37□□□□□ -0.91
VAMP2-201ENST00000316509 COL6A5A8TX70 2615 aa9.36□□□□□ -0.91
VAMP2-201ENST00000316509 TRRAPQ9Y4A5 3859 aa9.36□□□□□ -0.91
VAMP2-201ENST00000316509 A0A1B0GX51 115 aa9.36□□□□□ -0.91
VAMP2-201ENST00000316509 UNQ6190/PRO20217Q6UXQ8 127 aa9.36□□□□□ -0.91
VAMP2-201ENST00000316509 STAB1Q9NY15 2570 aa9.36□□□□□ -0.91
VAMP2-201ENST00000316509 DNAH10OSP0CZ25 163 aa9.36□□□□□ -0.91
VAMP2-201ENST00000316509 C2orf48Q96LS8 159 aa9.36□□□□□ -0.91
VAMP2-201ENST00000316509 NBEAL2Q6ZNJ1 2754 aa9.35□□□□□ -0.91
VAMP2-201ENST00000316509 MDFIQ99750 246 aa9.35□□□□□ -0.91
VAMP2-201ENST00000316509 ZNF561-AS1K7EIQ3 104 aa9.34□□□□□ -0.91
VAMP2-201ENST00000316509 BAALC-AS2P0C853 105 aa9.34□□□□□ -0.91
VAMP2-201ENST00000316509 C6orf223Q8N319 242 aa9.34□□□□□ -0.91
VAMP2-201ENST00000316509 C1orf43Q9BWL3 253 aa9.34□□□□□ -0.91
VAMP2-201ENST00000316509 TEX49A0A1B0GTD5 131 aa9.33□□□□□ -0.92
VAMP2-201ENST00000316509 C10orf25Q5T742 122 aa9.33□□□□□ -0.92
VAMP2-201ENST00000316509 CDIP1Q9H305 208 aa9.33□□□□□ -0.92
VAMP2-201ENST00000316509 DNAL4O96015 105 aa9.33□□□□□ -0.92
VAMP2-201ENST00000316509 C9orf116Q5BN46 136 aaPredicted RBP9.33□□□□□ -0.92
VAMP2-201ENST00000316509 FAM218AQ96MZ4 157 aa9.33□□□□□ -0.92
VAMP2-201ENST00000316509 FAM240AA0A1B0GVK7 77 aa9.31□□□□□ -0.92
VAMP2-201ENST00000316509 SNCGO76070 127 aa9.31□□□□□ -0.92
VAMP2-201ENST00000316509 C6orf48Q9UBA6 75 aa9.31□□□□□ -0.92
VAMP2-201ENST00000316509 A0A1B0GV72 72 aa9.3□□□□□ -0.92
VAMP2-201ENST00000316509 ACYP1P07311 99 aa9.3□□□□□ -0.92
VAMP2-201ENST00000316509 CAMK2N2Q96S95 79 aa9.3□□□□□ -0.92
VAMP2-201ENST00000316509 DNAH3Q8TD57 4116 aa9.29□□□□□ -0.92
VAMP2-201ENST00000316509 S100A7L2Q5SY68 101 aa9.29□□□□□ -0.92
VAMP2-201ENST00000316509 CMYA5Q8N3K9 4069 aa9.28□□□□□ -0.92
VAMP2-201ENST00000316509 INAFM2P0DMQ5 153 aa9.28□□□□□ -0.92
VAMP2-201ENST00000316509 RMI2Q96E14 147 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms