RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 LOC107984640A0A0U1RRK4 108 aa12.1□□□□□ -0.47
SCAMP4-201ENST00000316097 RPL36AP83881 106 aaKnown RBP12.1□□□□□ -0.47
SCAMP4-201ENST00000316097 RPL36ALQ969Q0 106 aaKnown RBP12.1□□□□□ -0.47
SCAMP4-201ENST00000316097 CSDC2Q9Y534 153 aaKnown RBP12.1□□□□□ -0.47
SCAMP4-201ENST00000316097 MIR7-3HGQ8N6C7 128 aa12.1□□□□□ -0.47
SCAMP4-201ENST00000316097 DNAL4O96015 105 aa12.09□□□□□ -0.47
SCAMP4-201ENST00000316097 C9orf129Q5T035 196 aaKnown RBP12.09□□□□□ -0.47
SCAMP4-201ENST00000316097 A0A087WYN8 130 aa12.09□□□□□ -0.47
SCAMP4-201ENST00000316097 IGKV2-28A0A075B6P5 120 aa12.08□□□□□ -0.48
SCAMP4-201ENST00000316097 IGKV2D-28P01615 120 aa12.08□□□□□ -0.48
SCAMP4-201ENST00000316097 C2orf48Q96LS8 159 aa12.08□□□□□ -0.48
SCAMP4-201ENST00000316097 SND1-IT1Q9HBX3 110 aa12.08□□□□□ -0.48
SCAMP4-201ENST00000316097 C14orf132Q9NPU4 83 aa12.08□□□□□ -0.48
SCAMP4-201ENST00000316097 K7EQD1 137 aa12.08□□□□□ -0.48
SCAMP4-201ENST00000316097 TOMM7Q9P0U1 55 aa12.08□□□□□ -0.48
SCAMP4-201ENST00000316097 STAB1Q9NY15 2570 aa12.07□□□□□ -0.48
SCAMP4-201ENST00000316097 KRTAP24-1Q3LI83 254 aa12.06□□□□□ -0.48
SCAMP4-201ENST00000316097 SMIM11BQ8TCY0 68 aa12.06□□□□□ -0.48
SCAMP4-201ENST00000316097 IGKV3D-7A0A0C4DH55 119 aa12.06□□□□□ -0.48
SCAMP4-201ENST00000316097 ATOX1O00244 68 aa12.06□□□□□ -0.48
SCAMP4-201ENST00000316097 HIST1H4AP62805 103 aaKnown RBP12.06□□□□□ -0.48
SCAMP4-201ENST00000316097 UBE2L6O14933 153 aa12.05□□□□□ -0.48
SCAMP4-201ENST00000316097 Q6ZTI0 123 aa12.05□□□□□ -0.48
SCAMP4-201ENST00000316097 IGKV3OR2-268A0A0C4DH90 116 aa12.04□□□□□ -0.48
SCAMP4-201ENST00000316097 COX7B2Q8TF08 81 aa12.04□□□□□ -0.48
SCAMP4-201ENST00000316097 TRBV10-1A0A0K0K1A3 114 aa12.04□□□□□ -0.48
SCAMP4-201ENST00000316097 hADV29S1A0JD25 119 aa12.04□□□□□ -0.48
SCAMP4-201ENST00000316097 LINC00158P58513 81 aa12.04□□□□□ -0.48
SCAMP4-201ENST00000316097 OVOL2Q9BRP0 275 aa12.04□□□□□ -0.48
SCAMP4-201ENST00000316097 CRYGAP11844 174 aa12.04□□□□□ -0.48
SCAMP4-201ENST00000316097 CMC4P56277 68 aaPredicted RBP12.04□□□□□ -0.48
SCAMP4-201ENST00000316097 CSNK1G2-AS1Q8NCQ2 148 aa12.03□□□□□ -0.48
SCAMP4-201ENST00000316097 TMEM243Q9BU79 118 aa12.03□□□□□ -0.48
SCAMP4-201ENST00000316097 LINC00846Q9NV44 126 aa12.03□□□□□ -0.48
SCAMP4-201ENST00000316097 PKD1L1Q8TDX9 2849 aa12.02□□□□□ -0.48
SCAMP4-201ENST00000316097 J3KT08 172 aa12.02□□□□□ -0.49
SCAMP4-201ENST00000316097 C9orf66Q5T8R8 295 aa12.02□□□□□ -0.49
SCAMP4-201ENST00000316097 NOP10Q9NPE3 64 aaKnown RBP12.02□□□□□ -0.49
SCAMP4-201ENST00000316097 RPL18AQ02543 176 aaKnown RBP12.02□□□□□ -0.49
SCAMP4-201ENST00000316097 CYSTM1Q9H1C7 97 aa12.02□□□□□ -0.49
SCAMP4-201ENST00000316097 LECT2O14960 151 aa12.01□□□□□ -0.49
SCAMP4-201ENST00000316097 CCL18P55774 89 aa12.01□□□□□ -0.49
SCAMP4-201ENST00000316097 IL17DQ8TAD2 202 aa12.01□□□□□ -0.49
SCAMP4-201ENST00000316097 MAST4O15021 2626 aa12.01□□□□□ -0.49
SCAMP4-201ENST00000316097 A0A087WVE0 104 aa12.01□□□□□ -0.49
SCAMP4-201ENST00000316097 A0A1B0GX51 115 aa12.01□□□□□ -0.49
SCAMP4-201ENST00000316097 NCR3O14931 201 aa12□□□□□ -0.49
SCAMP4-201ENST00000316097 H0YGX0 51 aa11.99□□□□□ -0.49
SCAMP4-201ENST00000316097 PFN2P35080 140 aa11.99□□□□□ -0.49
SCAMP4-201ENST00000316097 Q6JHZ5 121 aa11.99□□□□□ -0.49
SCAMP4-201ENST00000316097 PLAC8L1A1L4L8 177 aa11.98□□□□□ -0.49
SCAMP4-201ENST00000316097 SLPIP03973 132 aa11.98□□□□□ -0.49
SCAMP4-201ENST00000316097 LOC100131303A0A0U1RQF7 123 aa11.98□□□□□ -0.49
SCAMP4-201ENST00000316097 OR13C6PQ8NH95 151 aa11.98□□□□□ -0.49
SCAMP4-201ENST00000316097 FAM19A5Q7Z5A7 132 aaPredicted RBP11.97□□□□□ -0.49
SCAMP4-201ENST00000316097 OBSCN-AS1Q96MR7 158 aa11.97□□□□□ -0.49
SCAMP4-201ENST00000316097 COL6A5A8TX70 2615 aa11.97□□□□□ -0.49
SCAMP4-201ENST00000316097 OXLD1Q5BKU9 147 aa11.97□□□□□ -0.49
SCAMP4-201ENST00000316097 PAX4O43316 350 aa11.96□□□□□ -0.49
SCAMP4-201ENST00000316097 LINC01561Q8N1V8 128 aa11.94□□□□□ -0.5
SCAMP4-201ENST00000316097 WFDC9Q8NEX5 89 aa11.94□□□□□ -0.5
SCAMP4-201ENST00000316097 IGLV4-60A0A075B6I1 120 aa11.94□□□□□ -0.5
SCAMP4-201ENST00000316097 SERP2Q8N6R1 65 aa11.94□□□□□ -0.5
SCAMP4-201ENST00000316097 IBA57-AS1B1ANH7 110 aa11.93□□□□□ -0.5
SCAMP4-201ENST00000316097 C11orf68Q9H3H3 251 aaKnown RBP11.93□□□□□ -0.5
SCAMP4-201ENST00000316097 USP17L23D6RBM5 183 aa11.93□□□□□ -0.5
SCAMP4-201ENST00000316097 DEFB4AO15263 64 aa11.93□□□□□ -0.5
SCAMP4-201ENST00000316097 TRGV2A0A075B6R0 118 aa11.92□□□□□ -0.5
SCAMP4-201ENST00000316097 IGHV3OR16-9A0A0B4J2B5 98 aa11.92□□□□□ -0.5
SCAMP4-201ENST00000316097 KIR2DL5BQ8NHK3 375 aa11.92□□□□□ -0.5
SCAMP4-201ENST00000316097 C16orf74Q96GX8 76 aa11.92□□□□□ -0.5
SCAMP4-201ENST00000316097 DEFB135Q30KP9 77 aa11.92□□□□□ -0.5
SCAMP4-201ENST00000316097 ORMDL1Q9P0S3 153 aa11.91□□□□□ -0.5
SCAMP4-201ENST00000316097 SMIM9A6NGZ8 99 aa11.91□□□□□ -0.5
SCAMP4-201ENST00000316097 DEFB130BP0DP73 79 aa11.9□□□□□ -0.5
SCAMP4-201ENST00000316097 DEFB130AP0DP74 79 aa11.9□□□□□ -0.5
SCAMP4-201ENST00000316097 UPK3BQ9BT76 320 aa11.9□□□□□ -0.5
SCAMP4-201ENST00000316097 RPS28P62857 69 aaKnown RBP11.9□□□□□ -0.5
SCAMP4-201ENST00000316097 SS18Q15532 418 aa11.9□□□□□ -0.5
SCAMP4-201ENST00000316097 TRBV6-4A0A1B0GX49 114 aa11.89□□□□□ -0.51
SCAMP4-201ENST00000316097 TMEM258P61165 79 aa11.89□□□□□ -0.51
SCAMP4-201ENST00000316097 X6R8D5 127 aa11.89□□□□□ -0.51
SCAMP4-201ENST00000316097 A0A087WZ39 114 aa11.88□□□□□ -0.51
SCAMP4-201ENST00000316097 C5orf47Q569G3 176 aa11.88□□□□□ -0.51
SCAMP4-201ENST00000316097 TRGV4A0A0C4DH28 118 aa11.87□□□□□ -0.51
SCAMP4-201ENST00000316097 KRTAP10-11P60412 298 aa11.87□□□□□ -0.51
SCAMP4-201ENST00000316097 CCKP06307 115 aa11.87□□□□□ -0.51
SCAMP4-201ENST00000316097 C6orf226Q5I0X4 101 aa11.87□□□□□ -0.51
SCAMP4-201ENST00000316097 DPH3Q96FX2 82 aa11.87□□□□□ -0.51
SCAMP4-201ENST00000316097 IGHV4-30-4P0DP06 118 aa11.86□□□□□ -0.51
SCAMP4-201ENST00000316097 DSCR8Q96T75 97 aa11.86□□□□□ -0.51
SCAMP4-201ENST00000316097 ANK2Q01484 3957 aa11.86□□□□□ -0.51
SCAMP4-201ENST00000316097 TRBV6-8A0A0A6YYG3 113 aa11.86□□□□□ -0.51
SCAMP4-201ENST00000316097 CMYA5Q8N3K9 4069 aa11.83□□□□□ -0.52
SCAMP4-201ENST00000316097 NOTCH1P46531 2555 aa11.83□□□□□ -0.52
SCAMP4-201ENST00000316097 LINC00959A0A1B0GUT2 108 aa11.82□□□□□ -0.52
SCAMP4-201ENST00000316097 XCL1P47992 114 aa11.82□□□□□ -0.52
SCAMP4-201ENST00000316097 PRR3P79522 188 aaKnown RBP11.82□□□□□ -0.52
SCAMP4-201ENST00000316097 OXTP01178 125 aa11.82□□□□□ -0.52
SCAMP4-201ENST00000316097 TRAV23DV6A0A075B6W5 121 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms